LOC122363031 (LOC107692742,LOC107738533)


Basic Information

Item Value
gene id LOC122363031
gene name LOC107692742,LOC107738533
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 10744387 ~ 10761544 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264900.1
TGGTTATGCTCACTGCATTTTGAATAATCACTTCTGATATGATGCAATGCTAATAATGTGGTCAGAGAGGCCAAGATATCCTGACTGCAGAAAGCAGAAGCACATTATATGCAAGATGACACCATTTTCTAAGAATACTGTATCTGTCCCACTCTGGATACcgtttgtaatgctttttggTTCTGTCTGTGATGGTGGCAAAATCTTGGTGGTGCCTTTGGAGGGAAGTCACTGGGTGAACATGGAAGTCCTCATCAAGGCTTTACATGGTCAAGGGCACAGTGTTGATGTATTACGCCCCTCCAGTAGCTGGTTTATCAAGGAGAATTCAACTTATTATGGTTCTATAACTATACCCAGCACCGAAGCAATGGATGAAAAATTTATAGAAAACATGGTTTCCGAATCAATCAACTATGAAAGTGGAAAGAGCAACTGGCTGGGCACTTTAAGTCTGTATTTGGATACAGTTAAATACActtataaaatgcatgaaatggtATGTCAACttataataaacatgtttgaaaGTGAGGAAATTATGAAGACACTGAAGGAAAAGCAATATGATCTGGTGCTCACTGATCCGGTGTGGGCTGCAGGCATTTTCCTGGCTCATAAATTCAAGTTACCCTTGGTGTATAATGTAAGATGGACCACTCCTGGAGAGGGACATTTTGAGATCGCTCCCTCACCGTTGTCCTACATCCCTATCACAAGATCtagaaacacagacaaaatgaacttttttcaacgagtgcaaaatattttcagttatttgctAATGTACTTTCAGTATGGCTATTTTAATTTGGCACAGTACCAAGCACTTTGTGACAAATATTTCCACCCACCTGTACGTTTTTATGAACTTCTCCAGGGGGCTGATATATGGCTTATGAgggttgattttgtttttgaatttccACGTCCAACAATGCCAAATGTCATCTACATTGGTGGCTTCCAGTGCAATCCAGCGAAGGCCCTTCCACATGACCTGGAAGTCTTCATGCAAAGTTCTGGAGAGCATGGAGTGGTTATCATGTCTCTAGGATCATTTATCAGTGTCCTACCAGATGAGATATCAACTGAAATAGCGGCAGCTTTTGCTCGGCTCCCTCAAAAGGTTATTTGGAGATACACTGGAAAAAGACCATCTACTTTGGGCAACAACACATTGCTGGTTGACTGGATGCCACAAAATGATCTTCTAGGGCATCCAAAGACTAAAGTTTTTATTGCACATGGTGGAACCAATGGAGTTCAAGAAGCTTTGTATCATGGTGTTCCAGTGGTTGGAATTCCACTGTTTTTTGACCAGTATGACAATCTTCTTCGATTACAAGACAGAGGAGGAGCCAAGATCATTTCCCTTGAAATTTTAGATCAAAACACACTGCATGCAACTATACAGAAATTAATCAGGGATTCATCCTACAGACTGAACATGCAGAGATTGTCTCATCTTCACAGAGATACACCACTTAAACCTTTAGACACCGCTCTCTTCTGGATTGAGTTTGTAATGAGACACAAAGGTGCTGCTCATCTTCGGTCAGAATCCTACAAACTTCCTTGGTACTCCTATCACTCAGTAGATGTTGTCGTTACATTGTTTGCAGTTCTCTTGATATTCactctttctgtatttttaacagtTAGATATCTGTGTTTCAAGTGCTGCagcagaaaaaggaaaaatgagTGATACATTTGCGTATCTTACATGtatgtctttttctttattaatgttatgaTCAGCAAACTCAGCTTGGTATAGGAATCATGATGGTATAATGCAGAGTCTTGTCTGAAAATTAAATACCCTTGCGTTTTTGAGCCACACTAAtgtctttattaataattgtaccAGTTCCGTGTGCTGCTCATTACATAAGTACTCAAACACACTGCATCTTACTTAGTTTTTACTGATTCTTTATCCCTGTTATTGCTGtattattctaaaaaatatctgaaaacttTG
>XM_043264901.1
gacagcagcagcagcctttTTGTATTCGTGACTGTCCTTCTCAGCAACTCGCATCCAGCCTGGAGCACCCTCTAGAAGTGAACAGAGAAAGATTATCACTGAACAGCACTGAACAGAAGCAGTCATTATACCTGCAAGATGACACCATTTTCTAAGAATACTGTATCTGTCCCACTCTGGATACcgtttgtaatgctttttggTTCTGTCTGTGATGGTGGCAAAATCTTGGTGGTGCCTTTGGAGGGAAGTCACTGGGTGAACATGGAAGTCCTCATCAAGGCTTTACATGGTCAAGGGCACAGTGTTGATGTATTACGCCCCTCCAGTAGCTGGTTTATCAAGGAGAATTCAACTTATTATGGTTCTATAACTATACCCAGCACCGAAGCAATGGATGAAAAATTTATAGAAAACATGGTTTCCGAATCAATCAACTATGAAAGTGGAAAGAGCAACTGGCTGGGCACTTTAAGTCTGTATTTGGATACAGTTAAATACActtataaaatgcatgaaatggtATGTCAACttataataaacatgtttgaaaGTGAGGAAATTATGAAGACACTGAAGGAAAAGCAATATGATCTGGTGCTCACTGATCCGGTGTGGGCTGCAGGCATTTTCCTGGCTCATAAATTCAAGTTACCCTTGGTGTATAATGTAAGATGGACCACTCCTGGAGAGGGACATTTTGAGATCGCTCCCTCACCGTTGTCCTACATCCCTATCACAAGATCtagaaacacagacaaaatgaacttttttcaacgagtgcaaaatattttcagttatttgctAATGTACTTTCAGTATGGCTATTTTAATTTGGCACAGTACCAAGCACTTTGTGACAAATATTTCCACCCACCTGTACGTTTTTATGAACTTCTCCAGGGGGCTGATATATGGCTTATGAgggttgattttgtttttgaatttccACGTCCAACAATGCCAAATGTCATCTACATTGGTGGCTTCCAGTGCAATCCAGCGAAGGCCCTTCCACATGACCTGGAAGTCTTCATGCAAAGTTCTGGAGAGCATGGAGTGGTTATCATGTCTCTAGGATCATTTATCAGTGTCCTACCAGATGAGATATCAACTGAAATAGCGGCAGCTTTTGCTCGGCTCCCTCAAAAGGTTATTTGGAGATACACTGGAAAAAGACCATCTACTTTGGGCAACAACACATTGCTGGTTGACTGGATGCCACAAAATGATCTTCTAGGGCATCCAAAGACTAAAGTTTTTATTGCACATGGTGGAACCAATGGAGTTCAAGAAGCTTTGTATCATGGTGTTCCAGTGGTTGGAATTCCACTGTTTTTTGACCAGTATGACAATCTTCTTCGATTACAAGACAGAGGAGGAGCCAAGATCATTTCCCTTGAAATTTTAGATCAAAACACACTGCATGCAACTATACAGAAATTAATCAGGGATTCATCCTACAGACTGAACATGCAGAGATTGTCTCATCTTCACAGAGATACACCACTTAAACCTTTAGACACCGCTCTCTTCTGGATTGAGTTTGTAATGAGACACAAAGGTGCTGCTCATCTTCGGTCAGAATCCTACAAACTTCCTTGGTACTCCTATCACTCAGTAGATGTTGTCGTTACATTGTTTGCAGTTCTCTTGATATTCactctttctgtatttttaacagtTAGATATCTGTGTTTCAAGTGCTGCagcagaaaaaggaaaaatgagTGATACATTTGCGTATCTTACATGtatgtctttttctttattaatgttatgaTCAGCAAACTCAGCTTGGTATAGGAATCATGATGGTATAATGCAGAGTCTTGTCTGAAAATTAAATACCCTTGCGTTTTTGAGCCACACTAAtgtctttattaataattgtaccAGTTCCGTGTGCTGCTCATTACATAAGTACTCAAACACACTGCATCTTACTTAGTTTTTACTGATTCTTTATCCCTGTTATTGCTGtattattctaaaaaatatctgaaaacttTG
>XM_043264902.1
TTTTAGGAACACATAAAACACCaggacagcagcagcagcctttTTGTATTCGTGACTGTCCTTCTCAGCAACTCGCATCCAGCCTGGAGCACCCTCTAGAAGTGAACAGGCAAGATGACACCATTTTCTAAGAATACTGTATCTGTCCCACTCTGGATACcgtttgtaatgctttttggTTCTGTCTGTGATGGTGGCAAAATCTTGGTGGTGCCTTTGGAGGGAAGTCACTGGGTGAACATGGAAGTCCTCATCAAGGCTTTACATGGTCAAGGGCACAGTGTTGATGTATTACGCCCCTCCAGTAGCTGGTTTATCAAGGAGAATTCAACTTATTATGGTTCTATAACTATACCCAGCACCGAAGCAATGGATGAAAAATTTATAGAAAACATGGTTTCCGAATCAATCAACTATGAAAGTGGAAAGAGCAACTGGCTGGGCACTTTAAGTCTGTATTTGGATACAGTTAAATACActtataaaatgcatgaaatggtATGTCAACttataataaacatgtttgaaaGTGAGGAAATTATGAAGACACTGAAGGAAAAGCAATATGATCTGGTGCTCACTGATCCGGTGTGGGCTGCAGGCATTTTCCTGGCTCATAAATTCAAGTTACCCTTGGTGTATAATGTAAGATGGACCACTCCTGGAGAGGGACATTTTGAGATCGCTCCCTCACCGTTGTCCTACATCCCTATCACAAGATCtagaaacacagacaaaatgaacttttttcaacgagtgcaaaatattttcagttatttgctAATGTACTTTCAGTATGGCTATTTTAATTTGGCACAGTACCAAGCACTTTGTGACAAATATTTCCACCCACCTGTACGTTTTTATGAACTTCTCCAGGGGGCTGATATATGGCTTATGAgggttgattttgtttttgaatttccACGTCCAACAATGCCAAATGTCATCTACATTGGTGGCTTCCAGTGCAATCCAGCGAAGGCCCTTCCACATGACCTGGAAGTCTTCATGCAAAGTTCTGGAGAGCATGGAGTGGTTATCATGTCTCTAGGATCATTTATCAGTGTCCTACCAGATGAGATATCAACTGAAATAGCGGCAGCTTTTGCTCGGCTCCCTCAAAAGGTTATTTGGAGATACACTGGAAAAAGACCATCTACTTTGGGCAACAACACATTGCTGGTTGACTGGATGCCACAAAATGATCTTCTAGGGCATCCAAAGACTAAAGTTTTTATTGCACATGGTGGAACCAATGGAGTTCAAGAAGCTTTGTATCATGGTGTTCCAGTGGTTGGAATTCCACTGTTTTTTGACCAGTATGACAATCTTCTTCGATTACAAGACAGAGGAGGAGCCAAGATCATTTCCCTTGAAATTTTAGATCAAAACACACTGCATGCAACTATACAGAAATTAATCAGGGATTCATCCTACAGACTGAACATGCAGAGATTGTCTCATCTTCACAGAGATACACCACTTAAACCTTTAGACACCGCTCTCTTCTGGATTGAGTTTGTAATGAGACACAAAGGTGCTGCTCATCTTCGGTCAGAATCCTACAAACTTCCTTGGTACTCCTATCACTCAGTAGATGTTGTCGTTACATTGTTTGCAGTTCTCTTGATATTCactctttctgtatttttaacagtTAGATATCTGTGTTTCAAGTGCTGCagcagaaaaaggaaaaatgagTGATACATTTGCGTATCTTACATGtatgtctttttctttattaatgttatgaTCAGCAAACTCAGCTTGGTATAGGAATCATGATGGTATAATGCAGAGTCTTGTCTGAAAATTAAATACCCTTGCGTTTTTGAGCCACACTAAtgtctttattaataattgtaccAGTTCCGTGTGCTGCTCATTACATAAGTACTCAAACACACTGCATCTTACTTAGTTTTTACTGATTCTTTATCCCTGTTATTGCTGtattattctaaaaaatatctgaaaacttTG

Function

NR:

description
PREDICTED: UDP-glucuronosyltransferase 2C1-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016758 transferase activity, transferring hexosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264900.1 False 1990 mRNA 0.39 2 10744387 10761544
XM_043264901.1 True 2013 mRNA 0.40 3 10755599 10761544
XM_043264902.1 False 1989 mRNA 0.40 2 10755575 10761544

Neighbor

gene id symbol gene type direction distance location
acadl acadl coding upstream 383075 10352575 ~ 10361312 (+)
lysmd2 lysmd2,LOC107746939,LOC107747616,LOC107704265,LOC107588532,LOC107700588,LOC107550629 coding upstream 408634 10328942 ~ 10335753 (+)
tmod2 tmod2,tmod3,LOC107700589,LOC107746940,LOC107747615,LOC107704266,LOC107550632,LOC108440576,LOC108264495 coding upstream 423739 10297497 ~ 10320648 (+)
bcl2l10 bcl2l10,LOC107747612,LOC107700593,LOC107588535,LOC107704269 coding upstream 529901 10209353 ~ 10214486 (+)
gnb5b gnb5,gnb5b,LOC107700591,LOC107588534,LOC107704270 coding upstream 535237 10196804 ~ 10209150 (+)
vwa7 vwa7,LOC107715138,LOC107679011,LOC107588552,LOC107711113,LOC107692747,LOC107557822 coding downstream 98269 10859813 ~ 10870796 (+)
LOC122362996 si:ch211-132b12.1,si:ch211-132b12.2,zgc:158427,zgc:174946,LOC107715134,LOC107679003,LOC107588539,LOC107572724,LOC107679008,LOC106581333 coding downstream 110771 10872315 ~ 10877836 (+)
LOC122362995 si:ch211-132b12.2,LOC107572724,LOC107679008,LOC107679003,LOC107715134,LOC107588539,LOC106581333 coding downstream 123053 10884597 ~ 10889401 (+)
LOC122362997 si:ch211-132b12.1,zgc:174946,zgc:158427,si:ch211-132b12.6,si:ch211-132b12.3,LOC107715134,LOC107679003,LOC107588539,LOC107572724 coding downstream 127942 10889486 ~ 10897062 (+)
LOC122362532 LOC107711073,LOC107679025,LOC107714437,LOC107566685,LOC107684602,LOC100332250 coding downstream 246046 11007590 ~ 11028729 (+)
LOC122362658 NA non-coding upstream 141541 10601124 ~ 10602846 (+)
G125369 NA non-coding upstream 334787 10409318 ~ 10409600 (+)
LOC122362497 LOC107700584,LOC107746936,LOC107588541 non-coding upstream 335571 10404414 ~ 10408816 (+)
G125367 LOC107588541,LOC107700584,LOC107746936 non-coding upstream 336999 10406970 ~ 10407388 (+)
G125359 NA non-coding upstream 381151 10362931 ~ 10363236 (+)
G125470 LOC107715138,LOC107679011,LOC107588552,LOC107711113,LOC107557822,LOC107683099 non-coding downstream 24361 10785905 ~ 10787023 (+)
LOC122363043 NA non-coding downstream 83908 10845452 ~ 10849689 (+)
G125481 LOC107679019,LOC107711015,LOC107714456,LOC107692743,LOC107557844 non-coding downstream 136620 10898164 ~ 10920333 (+)
G125480 rasa2,LOC107566682,LOC107714449,LOC107679023,LOC107679004,LOC107710946,LOC107684605 non-coding downstream 174821 10936365 ~ 11044066 (+)
G125540 NA non-coding downstream 537459 11299003 ~ 11299260 (+)
sema6dl sema6dl,sema6d,LOC107588527,LOC107683673,LOC107557846,LOC107692740 other upstream 26302 10632477 ~ 10718085 (+)
gldn gldn,dmxl2,LOC107588556,LOC107700585,LOC107550630,LOC107704260,LOC107700583,LOC107746935,LOC107704254,LOC107550623 other upstream 318547 10416013 ~ 10425840 (+)
G125192 NA other upstream 1378899 9359436 ~ 9365488 (+)
LOC122362511 cmc2,LOC107711752 other upstream 2196664 8544699 ~ 8547723 (+)
G125041 atmin,LOC107719888,LOC107711756,LOC107567294,LOC107667974 other upstream 2207439 8176353 ~ 8536948 (+)
G125461 ugt5c1,LOC107692742,LOC107738533 other downstream 63430 10824974 ~ 10837276 (+)
G125496 snrpd2,LOC106612977 other downstream 206541 10968085 ~ 10969767 (+)
ccnl1a ccnl1a,LOC107710830,LOC107563513,LOC107684610,LOC107691967,LOC107557837 other downstream 464569 11226113 ~ 11233814 (+)
selenot1b selt1b,LOC107710848,LOC107684611,LOC107557827,LOC108429894 other downstream 472787 11234331 ~ 11237147 (+)
trpc6b trpc6b,trpc6a,LOC107713306,LOC107691992,LOC108429885,LOC108264040 other downstream 568677 11330221 ~ 11345797 (+)

Expression


Co-expression Network