LOC122363067 (LOC107559703,LOC107686559,LOC107662909,LOC107576256)


Basic Information

Item Value
gene id LOC122363067
gene name LOC107559703,LOC107686559,LOC107662909,LOC107576256
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 20414016 ~ 20422329 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264958.1
GAACAGCCGGATGGGAACTTTAATTGCCAACCTCAGTTTCACTGCTCAGCCGTCATCCAATCATATGCACTTAAGACTTTCTGGAAAAGATGCTGAATGGTTTTATCTGGAGGGAAGAACCATTAGACTGAACTCATCATCAACTAGGAATATTGATAGAGagATACACGGCTCAGTTTTAACAGCAACTGTAAGGTGTTACGAACATAAAACCCTACAGGCTGAACACAGGATCATGGTAGAGGTTCTGAATGAGAATGACAACAAACCCGAGTTCCTACAAAAATCAGCTCAACCTCTGCAGCTCAGTGagCTGACAGCGGTGAACTCTGTAGTGTTTACAGTCCAGGCCACAGATGCAGACGGAGACACACTCGCATACGTCATTGATGAAACATCACCTGATGCCAGGTATTTTCGAGTGGACTTACCGAACAGTGGCAAAGTGGTTCTCAACAAGTCACTGGACTATGAGATCAAAACCCAGCTCCGACTGACTCTTTATGCAGTGGAGACGAACACAAATGAACACTACAACACAACGACAACAATAATCATCAATGTGACGGATGGGGACGACCAATACCCACAGTTCCAGCCTTGCACTCTtctctcagccaatcacagcaaaCGAATATGTGCCAATCCTCTCTACACCGCCAACATCACAGAGAATGAGCAGGACATTGTCTTGGATTTCTTCCCGGGTCCGATTCAAGCCGTGGATGGCGATGAGGGTCTCAGAACGCCAGTAAAGTACACCATCCTGTCAGGAGCAGATAATGGCAGATTCGTCATTGACAGTAACTCCGGAGAGGTGAGGTTAACCAGACGCGTGGAGAACAGACTGCTCATCCCAACACTGAGACTGCGTGTTATGGCAGCTCAGACGGATGACCCTCTGAAATACGCAGTAGCCACAGTTCTGGTGAGGGTCCTGGCAGAAAACGGGTTCCCGCCGCAGTTCAGCCGGTCGACGTACCGCGGTTTCGTCAGCGAGAGCTCGAGCCCCGCCTCGCTCGTCACGACATACGGCAATAAATTACTTATCCTGGAAGCCACGGATCAAGACTTCACTGACGGCTTCAATCCCAGACTGCAGTATTCCCTAAACTCCAAACACAACAGCTCTCGGCTCTTTTACGTTACTCAAGAAGGACTGATCATCGCTAAAACTAGCCTGCTGCACCCCGGCCACAAATATTTCCTGGAGGTTATAGCTGCTGACCTGGAATCAGGAGACACCGTTAAAGCTGCACTGCATGTGGAAATTCTTCAGAAAGGCCAACCAGttCCACAGGGACCGTTGGGGGCGGTGCATGTGTATAGCAGCGAGACAGTGGGCAGGGCAGAGGGCGTGGcaggagtgtgtctgatcctgCTGGCCATTACTTTATTTACACTGGTGCGGTGCATAAGGATGATCAGAGAGAAGAGGGATCATGTTATCCGGACCAGTGTGGCTGACAACAGACACCCTAATGTTatGAACCACAGCCATCCGATGACTTTAGTGGAGGAAACCTTCTCATATCACAATGAGGCGTTCAGCGAGTACGACCAATCCACCTCACCCTTCTACGGCAAACAGGGCATCTACACCAAAATAGAAGAACCACTGCCATCATCTGTGACCTTACCATCAGTTACCTTCAACAAGTCCTTACGGGAGCCAAGACGCAATTATCTGGCACTGCGGCCCAACGGGAGACCCGTGAACAGGTTTAACAATAAAACCGTGTCGTTTCACGACTACGTTGTGGTTCGAGAATGGGATGAGGAGAGTGAAGAAAATACAGAGACTACATTCACAACAGAGGTGGAGATTTGTACCGATTTAGAAGACATTAACGTGGATTTTGAATTAGACAACGACGATTCAGATCTCCCAGAAGAAGAATTTCAAATCCAGTCACAAAGAATCACTTCATACTGTGACGAAATGCTCAACACGTACCTAAAAAGGGTCAAACTAGACTacgaaataaacaatacagACCAGATAGACTTGGAAGACAGAAAAGCACTGGAAATAAGGGACCAAAAATTAGCTGCAAAGCACAGATTCGAGTCTGACATACAAAGAATACATTCAACTGAAAGTCAAGAAAGAGATCAAACAGTAACGCAAAACTCAGGATTAATAGATAACACACAAGCAGAGTTCTCCATTTTTCTCGTTAACCCTAAAGCTGACAACACAGTCATCAACTATTCAGAAAGCTTTAAAACGGATGATTTTAATTTAGATCTTCAGGTTCCGGAAGCTGAAAGTTCTGTACAAAGCATTCATGATGCAAGTAACTTACAAACACATCTCGGCACATTAACACTTGATCCAGGTCAAAACAATGGATTGGAAGAATGTCTGGAAGTTGACACGGACAACACCCCAAGCTCGTATTATGTTAACGAGGACATTGCAACAAATTTAGATGACAGTAGCCCTGAAGAGGAGTCCATATCTAATCTAGATACAAGCGGTCAACATTTGAACTATCTTCATGATCCTCACGAGACACAGGTAGAATGTTTCTACGACACAGACACAGATGAAACTAATGATGGAAGATGATAGCGGGAGACTGATGAAAGCTTGAGCTTGAACACTAAATGAGCTTTTGTGAAATGGGAAAAGAACATTTGTTATTTGAGGCATTGGAGAGATGGGTGAGTAATACAAGCTTCTAACCCAAAGTATGCCCTTCACCGATGGTTTTCAGTCATCCTGTTCCCttcttgcattatttaatgtacATCATTGCACACAGACATGCTTTCTTTGTATTGAAATTGCACTTTGCAATGCAAACTCAAATAAAATCTACTGA

Function

NR:

description
PREDICTED: protocadherin beta-10-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264958.1 True 2831 mRNA 0.45 13 20414016 20422329

Neighbor

gene id symbol gene type direction distance location
dnaja2b dnaja2l,dnaja2,LOC107735561,LOC107705812,LOC107686561,LOC108438176,LOC103026191 coding upstream 42419 20364731 ~ 20371597 (+)
lmf2a lmf2a,LOC107564898,LOC107686567,LOC107600131,LOC107662891,LOC107735523,LOC107705770 coding upstream 92816 20311779 ~ 20321200 (+)
c2cd5 c2cd5,LOC107686569 coding upstream 102883 20286465 ~ 20311133 (+)
b4galnt3b LOC107705801,LOC107686572,LOC107564911,LOC107735491,LOC107662894 coding upstream 135520 20259769 ~ 20278496 (+)
fkbp4 fkbp4,LOC107686573,LOC107705800,LOC107564896,LOC107662895,LOC107735478 coding upstream 157569 20250402 ~ 20256447 (+)
si:dkey-88e18.2 LOC107686617,LOC107733267,LOC107560122 coding downstream 17815 20440144 ~ 20445367 (+)
vwf vwf,LOC107600553 coding downstream 48772 20471101 ~ 20504374 (+)
LOC122323072 LOC107559655,LOC107686551,LOC107733270,LOC107662882,LOC107736185,LOC563500,LOC107600544 coding downstream 83702 20506031 ~ 20531579 (+)
cers3b cers3b,LOC107559674,LOC107733272,LOC107662883,LOC107686553,LOC103029792 coding downstream 110577 20532906 ~ 20538618 (+)
syt1b syt1b,LOC107686614,LOC107733268,LOC107560093,LOC107662864 coding downstream 139506 20561835 ~ 20565306 (+)
G127785 NA non-coding upstream 30258 20325330 ~ 20383758 (+)
G127800 NA non-coding upstream 38181 20373854 ~ 20375835 (+)
G127780 NA non-coding upstream 132721 20256712 ~ 20281295 (+)
LOC122363139 NA non-coding upstream 189432 20221304 ~ 20224584 (+)
G127766 iqsec3b,LOC107564909,LOC107705799,LOC107735425,LOC107662846,LOC108413205 non-coding upstream 198785 20202748 ~ 20215231 (+)
G127860 NA non-coding downstream 139754 20562083 ~ 20572310 (+)
G127873 LOC107686547,LOC107710394,LOC107559637,LOC107600002,LOC107662879,LOC107735654 non-coding downstream 163722 20586051 ~ 20588863 (+)
LOC122363025 NA non-coding downstream 219436 20641765 ~ 20647708 (+)
LOC122362840 NA non-coding downstream 447546 20869875 ~ 20887115 (+)
G127935 NA non-coding downstream 472448 20894777 ~ 20937442 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other upstream 320415 20067678 ~ 20093601 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other upstream 398310 20003004 ~ 20015706 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 1125460 19269611 ~ 19288556 (+)
G127500 NA other upstream 1572481 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 1761852 18646362 ~ 18652164 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 123663 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 128819 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 167355 20589684 ~ 20600519 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other downstream 212516 20634845 ~ 20641059 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other downstream 1978615 22400944 ~ 22411957 (+)

Expression


Co-expression Network