uri1 (uri1,LOC107553985,LOC107684674,LOC107670159,LOC107583840)


Basic Information

Item Value
gene id uri1
gene name uri1,LOC107553985,LOC107684674,LOC107670159,LOC107583840
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 23963028 ~ 23970059 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043265046.1
TTAAAAAGGACACTCCTCCGGTCACGTACAGGCATTAATCAGCGATTTACGTTTATGATCAAACAATTCTTGTCATTAACATATCATTTAacgcaaaaaaatatatataatttttttatcttatacGTAATTACTCGTTGCATGATGGTAGGAGGATAACAGTAGACGTTGTCTTATTTATGCATTGTTATGCTGACAGTTATTTTTAGTCTACGTATGGTTtaggaaatgcattttttcttaccataaatatttgttatttataaatgaaagtgaaattaaatagGCGATCACGTGTTTGTAGTAGGGAGAGCGATATCCAGAGTACGTACTACATCCGTGATTAGATGAACATGGCGCAGGGGAAACAGGCCATCGGTGGACTGTAAACAAGAGGAAATTTTGGGATAACGTCGACATCGTACCATGCACGTGTGAAATGGTCTCAATCTCGATATACTGGACCAATTGTTCTGCTTCATTGATGACTACGAGGCGACAGATTGAGTGCAACACATCAAATTGCattcataaacatttctatAGGACTTCAAACCCCTGAGCATTCAGTGCTCggatatttaaacaaaaaaaaagccttgttttATTGCGGATGGCATCCGTGCACGATCAAATGGCTGCAAATGGAAAAGTCAAACGGAGTAAAGATCTGCCCAGAGGCGTTGAGAGGTTAAAAGAGGAGCACAGAAAGGTGGTGAAAGATTGCAGAAGTCAAATTGAGCACTGGAAAAAAGTGGAAAATGACTATGATTCTCTTCAAGAGCGCCTCAGGACTTTGCCTGACAAGTTGTCTTATGATATTATGGTACCGTTTGGTCCCTTGGCTTTCATGCCGGGAAAGCTAGTTCACACTAATGAGTTAACGGTGCTCCTCGGGGATAACTGGTTTGCGAAGTGTTCTGCCAAACAAGCGGACGGTCTTGTGGAACACAGAAAGAAACATGTCAAAAATACGCTAGACGACTTGCAGAAAGTGATGAAGAACTTTCAGAACAGAGCCGACTTTACAGATGATCTTGAAAAATTGACTGGTGCTgataCTGGAGATTTTGTGGACATAAGAGAAGATGTTATAAATGAGGAAGAAGTTACCAAAGGAAAACATCGTTTGGCCCACAAACCCAACTCTAAACCTAAGCTGGAGTATTTGTTGGAGCTGGAAGAGGACGAGAAGAAAGAAGGTgatgaagagagaaagacaggtGTGCTGTCAGAGGAGGAGCTGTGGGCTCGACTTGATGAACTAGAACGTGAGGAGGAACTTCAAGATGAGAGATACCGATTGGACAGCACAGACACTAATGGAGAAGACACCACTTCCTCCTCAGAGGAAGAGAAGGAAGCAGATGGTGGCAGCGGTGTCCAGGTTAATGGCCATCAGAAGGAAAATGGCTGGGTACCGACATCTATCCCAAGTCAGATGAACGGCACTAATGGCTCGCACcctgaggatgaggatgaggaggaagaaTGTGATGAGGAAACAGGCAATGGTCTTCCAACTATCTACTTTTCTCATACTGCCGAATTCAAAAAGGTCAGGATAAATACAGGCAAGAACACCACCCTAAAATTCAGcgaaagaaatgaacaaaaggcACAAGCCAAGCGCAAAAAGAAAAGCGGCAAAAGCAACGGCCATTCTCCTCATGAAAGTTACAAGATCACCAGCCCAGCAGACATTTATAGGGTGTTCGTGGACTTGGTGAACGGCGAGCCAATACCGCGCAAGTCCATTTTGAAGTCCCGCAGCCGTGAGAACAGCGTGTGCAGTGACACCAGCGAGAGCAGCACGGCGGACTTCGAAGAGCGCCGTGCAGCCTTCGGACGCTCGTGGAGCCACGATGACGCCACATACAGTGATACCAGCGATGGCATTACAGAGGAGGAAAGCCCCACCGGAACGAGCCCCCGCGCTAACGGACGCTTTGAGGCTTTTACAGGCACAGTGATTGAAAAGGATCCCCTGCCTTCGTCCATCCCACACCTGACCATCGCTCCTCCTGCCTTACCCACAATCCCTGAGAGGAAGCTGGAGGAGGTGGGCCCCGAAGCTCCTCAGGAGCCACCCAAGAGGATATCCAAGTTTAAAGCTACACGGTTGCATCAGAAATGAGTGTTCATCTTATCAGCGCACAACTTTTGAATTCGGTTTTGTACAACAGTAAGACTTATAGACTGACTTTCTCATTAGCTGCCCCTATTCCTCTGTCCTCCTTACTATAATGTCATCCGTGTTTTTGTGACATGCCATGCACCCTGGAAATTTTATTTGCTCAAtaagagtaataataataagataagaGATGATTGATTTTTCCCTcctaatgtttgcttttttttaaatgccagatGATTTATTTGAAGAGTAAGTTCAccagaaaatgaaaactgtcatcatttcctcgccttttttttttttttttttttttttttttttgtcttctttggAACACGAAAGACGTTGTTCCACaggaaagtcatacaggttggttgattaaataatgacagaattttcttttttttgcgtGAGCTGTCCATTTAAGGAATGAAGTAGTTTCACATGTTGGTTATCTTTTGCGTGGGTTAGTTTagatgaataattattaaaaacagaatggaaaaaataaaacgcttttaaaacaaacaaaactgtagTTAGTGGCATCATGACATTGTTGTCATTTGGTCTACGATGTGATTTATTTTCGGAAACGCTTTATCacaatttaatgtcattttctcAGATCATGACATACACGTGCAACTTCGACCTATGGTAGTCATGCAATTtgtcagcttaaaaaaaaaaaaaaaaaaacatttttatcccCTCTGAACTTTTGCCTCTGACTTTCCCTTATCTCGTTTTGTAtcttgtttttgtattgtttacagAGTTTTGGCTTTGTGcatcagcttttttttgtgacattcgGAAAATGTTGATGTAACTGAAatggaaacaaataaatgattttgacTGTA

Function

symbol description
uri1 Predicted to enable chromatin binding activity; phosphatase inhibitor activity; and transcription corepressor activity. Predicted to be involved in negative regulation of phosphatase activity and negative regulation of transcription by RNA polymerase II. Orthologous to human URI1 (URI1 prefoldin like chaperone).

NR:

description
unconventional prefoldin RPB5 interactor 1-like

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0016272 prefoldin complex cellular_component
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K17560 URI1; unconventional prefoldin RPB5 interactor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043265046.1 True 3009 mRNA 0.42 11 23963028 23970059

Neighbor

gene id symbol gene type direction distance location
spata2l LOC107670151,LOC107748780 coding upstream 2005 23958161 ~ 23961023 (+)
vps9d1 vps9d1,LOC107749294,LOC107553982,LOC107670156,LOC107748773 coding upstream 10817 23937000 ~ 23952211 (+)
utp4 utp4,LOC107749295,LOC107553989,LOC107748774,LOC107583899 coding upstream 26718 23928290 ~ 23936310 (+)
wfdc1 wfdc1,LOC107553961,LOC107749317,LOC107684670,LOC107583842,LOC107670154 coding upstream 35440 23915929 ~ 23927588 (+)
si:dkey-246g23.4 si:dkey-246g23.4,LOC107553963,LOC107684669,LOC107749297,LOC107738435 coding upstream 51046 23899926 ~ 23911982 (+)
LOC122362775 cdh13,LOC107722459,LOC107684661,LOC107738387 coding downstream 164354 24134413 ~ 24181542 (+)
cry1b cry1ab,LOC107672239,LOC107553944,LOC107583830 coding downstream 307223 24277282 ~ 24286775 (+)
zgc:153031 zgc:153031,LOC107664682,LOC107583831,LOC107672313,LOC107553959 coding downstream 317079 24287138 ~ 24291459 (+)
si:ch73-62b13.1 si:ch73-62b13.1,LOC107749314,LOC107740436,LOC107672215,LOC107553958,LOC107583921,LOC107664683,LOC108425440 coding downstream 338117 24308176 ~ 24314980 (+)
si:dkey-103i16.6 si:dkey-103i16.6,LOC107749280,LOC107664689,LOC107553976,LOC107672161 coding downstream 368832 24338891 ~ 24350157 (+)
G128725 NA non-coding upstream 175865 23785024 ~ 23787163 (+)
G128699 NA non-coding upstream 603471 23358451 ~ 23359557 (+)
G128696 NA non-coding upstream 625939 23335791 ~ 23337089 (+)
G128476 NA non-coding upstream 882718 23068310 ~ 23080310 (+)
G128475 NA non-coding upstream 895960 23066812 ~ 23067068 (+)
G128753 NA non-coding downstream 58430 24028489 ~ 24029817 (+)
G128770 NA non-coding downstream 86661 24056720 ~ 24063271 (+)
G128772 NA non-coding downstream 88294 24058353 ~ 24066103 (+)
G128803 NA non-coding downstream 327050 24297109 ~ 24297333 (+)
G128804 NA non-coding downstream 327550 24297609 ~ 24297845 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 226180 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 1524349 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 1551071 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 3321969 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 3362509 20589684 ~ 20600519 (+)
G128858 NA other downstream 479706 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 613786 24583845 ~ 24588337 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 1324684 25294743 ~ 25309740 (+)
mt2 NA other downstream 1376333 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 1951208 25921267 ~ 26174156 (+)

Expression


Co-expression Network