LOC122323060


Basic Information

Item Value
gene id LOC122323060
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 14740786 ~ 14743444 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006246940.1
TGAAGATGGAAACTGAACCAATGACCTTTTAGGTTTGCCGGTTTCTGGGAAATGAACATCacagaaaacataaaactaatGCATACGTAACAGATCTGGCGTCTCAGCTGTGGAGAGAAAAATTGCAGGAAAAAACTGAAACTCACCTTTTTCTTCAGAGTGGAGAAAACAAACCTCGATCACCCGGCCGCTTCAGCGTCCTTCTTCATCTAGAATGAGCTGATTCTGCATCTCAAGCCTCTTTTTTTACTCCACTCACTTTCTGAGAGCACAAAGAGTTCATAAAATAGATACATAGTACTTAATAATGTGCCAGATCCTGTTTAGATCCTCGTTTGGCTTGATAAACTACGCCAGTCAGAGCTGGTGTCTAGCCAGCAGAAAGCTGTCAGTATAGACAAGGCCAAGGACTGCTGGCAAACAGCGGCTGCATTTTAGCCAAAAGCTCCTTGTTTACTTCGAGAAGGAGAGCATCCGAGAAACAGCCTGATTTTGTGCTCCACGTCTCATGTATCGAAACATCACCTCTTTGTTTTAGGAATATTTAAGGCACCTGCGATCGGAGGCATTGCAGTTCCACAGCTTTCTGAAAGGAGTCGCTGCTGAGCATAAACAATCACACGTCGTACCCAAGAATAATCAGCTTCAGAGACGCCAACGAAAGCTCCGTTATCAGGCCTCAATTTAATTGTGAAGTCTGGGTAGTCTGCTAACGCTGGGCTGATGTGAAGAACCGATCCGCGCTGTTATTCTCTCATGTGGGCGCTGAACACCACTTCAAGCTAAAATGAGACGGTCCAGTgtgatttattataaaactcGGCTCAGCAGGACAAAAAAGGGACAGAAATCACCCAGCCTTCAAGCTTTTGTTGTCACATCAACCATGATGCACGCATTCCAATGAAGAAGGATGAAAGAGAAAATCACACGTCAGTCAGGTGACAAGAACACTCACAGCGGCAGTGCTTTACACTTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006246940.1 True 983 lncRNA 0.44 3 14740786 14743444

Neighbor

gene id symbol gene type direction distance location
fli1 fli1,LOC107692484,LOC107656981 coding upstream 12899 14704160 ~ 14727887 (+)
smtla LOC107709547,LOC107590731,LOC107692520,LOC107656966 coding upstream 157532 14578170 ~ 14583254 (+)
barx2 barx2,LOC107670639,LOC107692488,LOC102779973 coding upstream 593599 14130499 ~ 14147187 (+)
rbm7 rbm7,LOC107755678,LOC107739154 coding upstream 613942 14123396 ~ 14126844 (+)
LOC122323172 LOC107560134,LOC107692493,LOC107733301,LOC107670597,LOC107717611,LOC107602107 coding upstream 867521 13870029 ~ 13873265 (+)
kcnj5 kcnj5,LOC107725067,LOC107558569,LOC107709561 coding downstream 8738 14752182 ~ 14775393 (+)
bmp16 LOC107566293,LOC107692530,LOC107709563,LOC107577119,LOC107725066 coding downstream 99767 14843211 ~ 14850376 (+)
ppp1r37 ppp1r37,LOC107692481,LOC107566290,LOC107709550 coding downstream 128324 14871768 ~ 14901407 (+)
shkbp1 shkbp1,LOC107692479,LOC107724139,LOC107656962 coding downstream 167600 14911044 ~ 14921023 (+)
si:ch211-136a13.1 LOC107727474,LOC107566284,LOC107692514,LOC107722278,LOC108264834,LOC108435511,LOC106580732 coding downstream 308600 15052044 ~ 15064838 (+)
G126285 NA non-coding upstream 269771 14470760 ~ 14471015 (+)
G126262 NA non-coding upstream 298283 14375565 ~ 14442503 (+)
G126251 NA non-coding upstream 619936 14120193 ~ 14120850 (+)
G126243 NA non-coding upstream 671915 14068604 ~ 14068871 (+)
G126192 NA non-coding upstream 791422 13948152 ~ 13949364 (+)
G126347 NA non-coding downstream 188877 14932321 ~ 14984748 (+)
G126345 ltbp4,LOC107724163,LOC107566282,LOC107692515 non-coding downstream 193481 14936925 ~ 14937634 (+)
G126458 NA non-coding downstream 322902 15066346 ~ 15066577 (+)
G126591 NA non-coding downstream 1017519 15760963 ~ 15820330 (+)
G126605 NA non-coding downstream 1081983 15825427 ~ 15828353 (+)
G126146 gramd1bb other upstream 799417 13940095 ~ 13941369 (+)
G126175 NA other upstream 827986 13909564 ~ 13912800 (+)
lbhl lbhl other upstream 871454 13861871 ~ 13869332 (+)
daw1 daw1,LOC107727686,LOC107576612,LOC107717604 other upstream 1034672 13670289 ~ 13706114 (+)
gemin7 NA other downstream 83344 14826788 ~ 14828292 (+)
LOC122322993 LOC107709552 other downstream 163172 14906616 ~ 14910157 (+)
LOC122362588 NA other downstream 291939 15035383 ~ 15047893 (+)
LOC122362954 LOC107740354 other downstream 1207538 15950982 ~ 15953653 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other downstream 1303625 16047069 ~ 16055627 (+)

Expression


Co-expression Network