LOC122323089


Basic Information

Item Value
gene id LOC122323089
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 21694446 ~ 21835021 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006246944.1
TTCAGGAACGAAACGGAGCGCGCGGAGATGCACATCGTTCAGTTTTTTGCGGCTTTGTGGAGCTATTTAAAGTGCCGGGGAAACACAACTGACAGTACTGTATTTGACAATaaacATCTTCAATGGGGAAAAGTAACACGTGATGGATCACCGAACAGGTCATTTTAAGCGTCCTGTAGGTGTGGATTTTCGCTTGCCAGGACAACACCAACTCAAACTCCTCCACAGAAAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006246944.1 True 234 lncRNA 0.46 3 21694446 21835021

Neighbor

gene id symbol gene type direction distance location
LOC122323126 LOC107738418,LOC107723941,LOC107672595,LOC107563412,LOC100334116,LOC107673134,LOC107559839 coding upstream 12611 21656321 ~ 21681835 (+)
LOC122363109 cacna2d1,LOC107672590,LOC107738419,LOC107673139 coding upstream 56124 21550145 ~ 21638322 (+)
pclob LOC107559387,LOC107723935,LOC107672584,LOC107665542,LOC107738431,LOC107563410 coding upstream 148312 21477328 ~ 21546134 (+)
sema3e sema3e,LOC107665550,LOC107723938,LOC107563409,LOC107738421,LOC107559846 coding upstream 227853 21428727 ~ 21466593 (+)
sema3ab sema3ab,sema3a,LOC107665547,LOC107672583 coding upstream 285605 21378928 ~ 21408841 (+)
lepa NA coding downstream 85086 21920107 ~ 21922673 (+)
mical3a LOC107673136,LOC108414616,LOC108264267,LOC106573174,LOC106561386 coding downstream 119282 21954303 ~ 22015456 (+)
ttc38 ttc38,LOC107722483,LOC107673144,LOC107738443 coding downstream 181291 22016312 ~ 22026457 (+)
LOC122362522 LOC107670367,LOC107559271,LOC107673148,LOC107738440,LOC556054,LOC108414180,LOC108264794,LOC101481124 coding downstream 406451 22241472 ~ 22261969 (+)
LOC122363070 mical3a,LOC107559327,LOC107673136,LOC107672585,LOC108414616 coding downstream 539567 22374588 ~ 22399236 (+)
G128251 NA non-coding upstream 52817 21638410 ~ 21641629 (+)
G128216 NA non-coding upstream 225893 21466778 ~ 21468553 (+)
G128158 NA non-coding upstream 528373 21165272 ~ 21166073 (+)
G128157 LOC107559445,LOC107665544,LOC107710380 non-coding upstream 531695 21161886 ~ 21162751 (+)
G128149 NA non-coding upstream 565413 21128553 ~ 21129033 (+)
G128318 NA non-coding downstream 198650 22033671 ~ 22068953 (+)
G128329 tspan9a,LOC107559293,LOC107738414,LOC107587031,LOC107672591,LOC107084745,LOC108414266 non-coding downstream 274452 22109473 ~ 22110458 (+)
LOC122363071 NA non-coding downstream 552578 22387599 ~ 22388615 (+)
G128377 NA non-coding downstream 699445 22534466 ~ 22535424 (+)
G128379 NA non-coding downstream 701754 22536775 ~ 22543533 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 1053387 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 1093927 20589684 ~ 20600519 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other upstream 1137819 20551148 ~ 20556627 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other upstream 1145089 20545992 ~ 20549357 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other upstream 1600845 20067678 ~ 20093601 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other downstream 565923 22400944 ~ 22411957 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other downstream 599785 22434806 ~ 22438679 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other downstream 1622079 23457100 ~ 23736848 (+)
G128858 NA other downstream 2614744 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 2748824 24583845 ~ 24588337 (+)

Expression


Co-expression Network