LOC122323099


Basic Information

Item Value
gene id LOC122323099
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 10133971 ~ 10135088 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006246947.1
TGAGTATGTTCCTCCCCTGTAGTTAGAAGACAGCCTATCAGAGCAGAGTGCTGCGTATATAAAAGCCGCTTGTTGTGCTACCCGGGATGTGTCATTGCTAGCTCCGCCCCTTGGTGTGTGTGGGTTTCCGCATGGAAAAGCTGGAATAGCTTCTGGTTTGCGGTTTTGCAGTGGTGCGCAGGCTGTCATTGATCCCCGGTAAGCCCAGTTTGATAAACggtttatataaaattacatctGTTTAAGTCGCATGTTTTGATTTCAGCTGGCTTGAGTCCACTTTTCGTGTGAATTGTCAAACATTATGCTGTGAGCAATCATACAACTTAGGTTATTGTGACGAAGATTTGGgCCCTGTATGAGAAGGCTAGCTGTTATGATATCCTGGTGGTGGTGTTTGGAGCACGAAGTATGGACTGCTGTCTGATCACTCACTCcactggtgtgtttgtgtgcgcgtgTGGTTTAACATTCACTTTACAGCTAGCCTAGTCTGTTTGTACGTTTTAGTCCCTGTTTGACTTGCtgtggttcttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006246947.1 True 547 lncRNA 0.45 3 10133971 10135088

Neighbor

gene id symbol gene type direction distance location
LOC122363015 myo5a,myo5aa,LOC107746947,LOC107712751 coding upstream 332400 9751257 ~ 9801571 (+)
arpp19a arpp19a,LOC107704273,LOC107676482,LOC107712699,LOC107550627,LOC107588548,LOC108413875 coding upstream 384188 9744904 ~ 9749783 (+)
fam214a fam214a,LOC107676484,LOC107704272,LOC107550636,LOC107588549 coding upstream 394565 9709204 ~ 9739406 (+)
onecut1 onecut1,LOC107746960,LOC107676486,LOC107712763,LOC107704258 coding upstream 431825 9696223 ~ 9702146 (+)
iqcg iqcg coding upstream 569724 9555052 ~ 9564247 (+)
LOC122362557 NA coding downstream 12987 10148075 ~ 10160926 (+)
LOC122362596 NA coding downstream 55682 10190770 ~ 10193160 (+)
gnb5b gnb5,gnb5b,LOC107700591,LOC107588534,LOC107704270 coding downstream 61716 10196804 ~ 10209150 (+)
bcl2l10 bcl2l10,LOC107747612,LOC107700593,LOC107588535,LOC107704269 coding downstream 74265 10209353 ~ 10214486 (+)
tmod2 tmod2,tmod3,LOC107700589,LOC107746940,LOC107747615,LOC107704266,LOC107550632,LOC108440576,LOC108264495 coding downstream 162409 10297497 ~ 10320648 (+)
G125254 NA non-coding upstream 71191 10057741 ~ 10062780 (+)
G125253 NA non-coding upstream 78914 10054812 ~ 10055057 (+)
G125240 NA non-coding upstream 96043 9802919 ~ 10037928 (+)
G125243 NA non-coding upstream 345868 9786260 ~ 9788103 (+)
G125236 NA non-coding upstream 438288 9694203 ~ 9695683 (+)
G125341 mapk6,LOC107550634,LOC107704268,LOC107747613,LOC107588533,LOC107700590 non-coding downstream 113052 10248140 ~ 10249308 (+)
G125344 NA non-coding downstream 149550 10284638 ~ 10288340 (+)
G125347 NA non-coding downstream 151639 10286727 ~ 10341585 (+)
G125352 NA non-coding downstream 206679 10341767 ~ 10343454 (+)
G125353 LOC107700587,LOC107746952,LOC107588544,LOC107588531,LOC107747623,LOC107704264 non-coding downstream 209681 10344769 ~ 10348696 (+)
G125192 NA other upstream 768483 9359436 ~ 9365488 (+)
LOC122362511 cmc2,LOC107711752 other upstream 1586248 8544699 ~ 8547723 (+)
G125041 atmin,LOC107719888,LOC107711756,LOC107567294,LOC107667974 other upstream 1597023 8176353 ~ 8536948 (+)
si:ch73-103b9.2 LOC107675000,LOC107667976,LOC107719884,LOC107711755,LOC107567296,LOC101883751 other upstream 1601899 8168865 ~ 8532072 (+)
gldn gldn,dmxl2,LOC107588556,LOC107700585,LOC107550630,LOC107704260,LOC107700583,LOC107746935,LOC107704254,LOC107550623 other downstream 280925 10416013 ~ 10425840 (+)
sema6dl sema6dl,sema6d,LOC107588527,LOC107683673,LOC107557846,LOC107692740 other downstream 497389 10632477 ~ 10718085 (+)
G125461 ugt5c1,LOC107692742,LOC107738533 other downstream 689886 10824974 ~ 10837276 (+)
G125496 snrpd2,LOC106612977 other downstream 832997 10968085 ~ 10969767 (+)
ccnl1a ccnl1a,LOC107710830,LOC107563513,LOC107684610,LOC107691967,LOC107557837 other downstream 1091025 11226113 ~ 11233814 (+)

Expression


Co-expression Network