LOC122363043


Basic Information

Item Value
gene id LOC122363043
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 10845452 ~ 10849689 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006253185.1
AGAGCACAATGTCAGGAATCCAGATGGAGTCTGAGGGAACTCTGATGGAGGTGATGCCCAGATAATGATCCGGATTCCATCGGAGCTTCATGTCTGTCCACTCCTGAATGCAACTGAATCAACACCACTGAGAGAGATCTGGACATGTATACTTTGAAGAACGTATCATGAGATGTCCCTCAGTCGGGGAACTGAGCCAAGGTCAGAGACACTCACCTATAGAGGAGCAGAGGACAGCACAGCAAACTAGCAGGAGGACAGATCTGACAGCGCTTTGAGCT

Function

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0006812 cation transport biological_process
GO:0045211 postsynaptic membrane cellular_component
GO:0030054 cell junction cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006253185.1 True 281 lncRNA 0.49 3 10845452 10849689

Neighbor

gene id symbol gene type direction distance location
LOC122363031 LOC107692742,LOC107738533 coding upstream 83908 10744387 ~ 10761544 (+)
acadl acadl coding upstream 484140 10352575 ~ 10361312 (+)
lysmd2 lysmd2,LOC107746939,LOC107747616,LOC107704265,LOC107588532,LOC107700588,LOC107550629 coding upstream 509699 10328942 ~ 10335753 (+)
tmod2 tmod2,tmod3,LOC107700589,LOC107746940,LOC107747615,LOC107704266,LOC107550632,LOC108440576,LOC108264495 coding upstream 524804 10297497 ~ 10320648 (+)
bcl2l10 bcl2l10,LOC107747612,LOC107700593,LOC107588535,LOC107704269 coding upstream 630966 10209353 ~ 10214486 (+)
vwa7 vwa7,LOC107715138,LOC107679011,LOC107588552,LOC107711113,LOC107692747,LOC107557822 coding downstream 10124 10859813 ~ 10870796 (+)
LOC122362996 si:ch211-132b12.1,si:ch211-132b12.2,zgc:158427,zgc:174946,LOC107715134,LOC107679003,LOC107588539,LOC107572724,LOC107679008,LOC106581333 coding downstream 22626 10872315 ~ 10877836 (+)
LOC122362995 si:ch211-132b12.2,LOC107572724,LOC107679008,LOC107679003,LOC107715134,LOC107588539,LOC106581333 coding downstream 34908 10884597 ~ 10889401 (+)
LOC122362997 si:ch211-132b12.1,zgc:174946,zgc:158427,si:ch211-132b12.6,si:ch211-132b12.3,LOC107715134,LOC107679003,LOC107588539,LOC107572724 coding downstream 39797 10889486 ~ 10897062 (+)
LOC122362532 LOC107711073,LOC107679025,LOC107714437,LOC107566685,LOC107684602,LOC100332250 coding downstream 157901 11007590 ~ 11028729 (+)
G125470 LOC107715138,LOC107679011,LOC107588552,LOC107711113,LOC107557822,LOC107683099 non-coding upstream 58429 10785905 ~ 10787023 (+)
LOC122362658 NA non-coding upstream 242606 10601124 ~ 10602846 (+)
G125369 NA non-coding upstream 435852 10409318 ~ 10409600 (+)
LOC122362497 LOC107700584,LOC107746936,LOC107588541 non-coding upstream 436636 10404414 ~ 10408816 (+)
G125367 LOC107588541,LOC107700584,LOC107746936 non-coding upstream 438064 10406970 ~ 10407388 (+)
G125481 LOC107679019,LOC107711015,LOC107714456,LOC107692743,LOC107557844 non-coding downstream 48475 10898164 ~ 10920333 (+)
G125480 rasa2,LOC107566682,LOC107714449,LOC107679023,LOC107679004,LOC107710946,LOC107684605 non-coding downstream 86676 10936365 ~ 11044066 (+)
G125540 NA non-coding downstream 449314 11299003 ~ 11299260 (+)
LOC122362586 NA non-coding downstream 457858 11307547 ~ 11309510 (+)
G125709 NA non-coding downstream 1053770 11903459 ~ 11903992 (+)
G125461 ugt5c1,LOC107692742,LOC107738533 other upstream 8176 10824974 ~ 10837276 (+)
sema6dl sema6dl,sema6d,LOC107588527,LOC107683673,LOC107557846,LOC107692740 other upstream 127367 10632477 ~ 10718085 (+)
gldn gldn,dmxl2,LOC107588556,LOC107700585,LOC107550630,LOC107704260,LOC107700583,LOC107746935,LOC107704254,LOC107550623 other upstream 419612 10416013 ~ 10425840 (+)
G125192 NA other upstream 1479964 9359436 ~ 9365488 (+)
LOC122362511 cmc2,LOC107711752 other upstream 2297729 8544699 ~ 8547723 (+)
G125496 snrpd2,LOC106612977 other downstream 118396 10968085 ~ 10969767 (+)
ccnl1a ccnl1a,LOC107710830,LOC107563513,LOC107684610,LOC107691967,LOC107557837 other downstream 376424 11226113 ~ 11233814 (+)
selenot1b selt1b,LOC107710848,LOC107684611,LOC107557827,LOC108429894 other downstream 384642 11234331 ~ 11237147 (+)
trpc6b trpc6b,trpc6a,LOC107713306,LOC107691992,LOC108429885,LOC108264040 other downstream 480532 11330221 ~ 11345797 (+)
G125830 NA other downstream 1959761 12809450 ~ 12822781 (+)

Expression


Co-expression Network