LOC122363139


Basic Information

Item Value
gene id LOC122363139
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 20221304 ~ 20224584 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006253191.1
GAGCTGGTACTGACGAAACGCCGTCTGGATCTTACAGGCCGCTCGCCGGGAAATCAGAGGACCGCCGTACTTCTGCTCCAGTTCCTCGATCTGCAGCAGGAATCGAGCTGCGGTTTCAAATGACACAAGTGAGCAGTGGCTGACCCAGATTCACCGTCTTTTAATCTAGACTGATCAGAACCCAGTGCGCACTCAAGACTAATTAACTCTGCTTAATTACTACATGCAGGCTTTCACAGATTTCAGAATTTGACGCAGTCTTAATGGAAAATGAGGTTCTCTCTCGGTGTAGACATGGGTTTACAACGCGCACAGGCACGCTGCTGACTGCATTCACTGTCAGCACATTAGCTGCTACCCTGGAGTAAAGGCCACTTAAGCTCTGTAAGCACTCATACACGAGGAGCGGAGAGCAGGGCTTTCCATCTTTCATGCGCCGAGTGCTGCTCGCCTCTGAGGAACGACAACAAATGCAGCAGAACCTTAAAAGAGAGTGAAAACAGACGCCGGAGCGCACGGTCACCACAGATCATTAGGTCGCTGCGCAATCGATCTGACAACCCAAACTGAAATGTGATATACTGTAGCTCTTCATATGAGAGAGAGCGTGcgatgatgtcatttcctgtgttATGCCTCAATAACTATGCTCTCAAGCTGTTAAAAAACTGATTGTGAACGACAGGTTTCAACGTCGAGCAGAAACCCAGGCAGTCCCTCTGTGCAAATAAAAGGTGAGAAACTACCGCACCAAAACCCTTTCCTGTTCATTTGGGAAATAACTGGCAAACAATCACGATAGGCTTTCGCAAAAATTAAACTGCTCTCTCCCGTTCATCgataaaacatcagtaaaacTTCATTAGCGCTGCTTACTCTGGCTTACGGTTAGTGATTAAACTTCAGTTCGCTCCTGAAGCAGCTCCAGATATCCCCACAAACTAACCCAAAGAATAGCCTAGCAACCACAACCACATAGATgctaaaaacactaaaaaaggATTTCTGCACCGTAAATCATGTCATTTCAAtgagaaaatactgtaaaaatgttacagtaaaaatacttaattGTGGCAATTTATAAAAATCGGTTGTTTAACAGGACattgtgtgtaatattttgcatgtaatgTAATTCCTATAGAAAACCACAGTCATTTCTACAATATCTACTGTGAAAAATGTAAGTTCAACATTCTTATTTTtacaatactgtaaaatgtacaatgttttttgtatgttatgAAAATTACTAATAACATTTATGGTGGAAAAATTGTAGGATATTCCCAAAAGACCCTACATGACAAAATATAAGAACATGTTTGAATTGATTGAAGCAAAGCAAGTGTAACACAATACATCATTTCTGAATTGAACAGAACAGAATCCAACAgaaaatattgacattattatagatgtcaaaattattagaaaagaACCAAATAGAGTGTAATGCAACAGAACAGATCAGAACAGCATATTTGAACTGAATagaacagaatttttttactataactATATGCTGTCAAAAAATTGTACTTAAATTGTAAACTTTAACATTCCATTATATGTAAATTTGGtatgtaaattatttgtattactaataaatgtatGGTGAAAACCCTACAAAAtggatcacatttattttaatttatgggtaaaatgcatatttcagttgtttGGTGTATTGGTGTATAACATCACATcgcttaattaaatatatgttctAAGTTTTAAATTATACAGGCATCCTGTTATACAGGAATACTatctctgtatttttacagcCAGTATCAAATTAACAAAATACTTTTCACATTGAATTACAGGTGagaaacaaaatacattcagGCTGCATGCTTATCTTGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006253191.1 True 1877 lncRNA 0.38 3 20221304 20224584

Neighbor

gene id symbol gene type direction distance location
ptprq ptprq,LOC107705767,LOC107662847,LOC107564908,LOC107564907,LOC108413201,LOC107683214 coding upstream 23489 20160121 ~ 20197815 (+)
LOC122362491 LOC107736106 coding upstream 61126 20155466 ~ 20160178 (+)
otogl otogl,LOC107736094,LOC107686601,LOC107662850 coding upstream 66852 20121656 ~ 20154452 (+)
si:ch1073-390k14.1 LOC107600154,LOC107662899,LOC107736082 coding upstream 102872 20101629 ~ 20118432 (+)
glg1b glg1,LOC107686575,LOC107705797,LOC107573092,LOC107662902,LOC105906547 coding upstream 165997 20017374 ~ 20055307 (+)
wash1 wash1,LOC107564895,LOC107686618,LOC107662897 coding downstream 5570 20230154 ~ 20238801 (+)
fkbp4 fkbp4,LOC107686573,LOC107705800,LOC107564896,LOC107662895,LOC107735478 coding downstream 25818 20250402 ~ 20256447 (+)
b4galnt3b LOC107705801,LOC107686572,LOC107564911,LOC107735491,LOC107662894 coding downstream 35185 20259769 ~ 20278496 (+)
c2cd5 c2cd5,LOC107686569 coding downstream 61881 20286465 ~ 20311133 (+)
lmf2a lmf2a,LOC107564898,LOC107686567,LOC107600131,LOC107662891,LOC107735523,LOC107705770 coding downstream 87195 20311779 ~ 20321200 (+)
G127766 iqsec3b,LOC107564909,LOC107705799,LOC107735425,LOC107662846,LOC108413205 non-coding upstream 6073 20202748 ~ 20215231 (+)
G127663 NA non-coding upstream 229668 19985741 ~ 19991636 (+)
G127637 golim4,LOC107662907 non-coding upstream 296502 19781765 ~ 19924802 (+)
G127632 NA non-coding upstream 594783 19626153 ~ 19626521 (+)
G127630 NA non-coding upstream 598022 19623013 ~ 19623282 (+)
G127780 NA non-coding downstream 32128 20256712 ~ 20281295 (+)
G127785 NA non-coding downstream 100746 20325330 ~ 20383758 (+)
G127800 NA non-coding downstream 149270 20373854 ~ 20375835 (+)
G127860 NA non-coding downstream 337499 20562083 ~ 20572310 (+)
G127873 LOC107686547,LOC107710394,LOC107559637,LOC107600002,LOC107662879,LOC107735654 non-coding downstream 361467 20586051 ~ 20588863 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other upstream 127703 20067678 ~ 20093601 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other upstream 205598 20003004 ~ 20015706 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 932748 19269611 ~ 19288556 (+)
G127500 NA other upstream 1379769 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 1569140 18646362 ~ 18652164 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 321408 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 326564 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 365100 20589684 ~ 20600519 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other downstream 410261 20634845 ~ 20641059 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other downstream 2176360 22400944 ~ 22411957 (+)

Expression


Co-expression Network