G130138



Basic Information


Item Value
gene id G130138
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 3496699 ~ 3498554 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU192129
TAGggtttgaaattatttattaaaaaaaaaaacatgtataataaCACTTCCAGCATGACAAAGGTGAACAAGTTAGACAAACAGTCATCTAACGTCTGAGGAGAGATGAGCCTCAGATATGTTTTGGGTGACAGCTCTCAGCTGAACTTGGCTTTGGAGAAGTCCATCTCCGGATGCTGAGCCATGAACCTGTGAACACAGATCAACATCCGTCAAAGATCGTACGCTGACCGAATCATTCATCTCGTGGCAGAAACCAGGGTTCGTACCGAAACTGCAAAATGAAACGCACGCCGAACGATACGGTTATTATCTTTCAAATTATAATACGTAAACTAAACACACCTGTGCGGCCATACCGATAAAACCCTTTTATTCCTCCCAGTCTTGTAAATCTACGAATcgtgtatttttattcaatatatgtGTATCATTATTATCGTTATGACTGTGTTTTAACGATAAATGAGCGTGTTGTTTTATTTACGGAAATGAAACTCCGCGAATGATTTATTCGTCAGTAAAACATCAACCGCATTTACAGTGGTCTAATAATTAGCCTAATAATTCAACCTTTAAGCCACACTTCCTGTAAAAACCCCCAGTCGTACAAAGTTTTATTAGATGTCTAGCATTTACAGCAACCTATTTTCTACAGAATGGTTCAGAACGCTAAAAGAAGGCTAAATAAATCAGACACGTGAAGAATacaattaacatttattcatgataaACTTAATTTGTGCACAAGCTAGACCTATGGTTAATGtactaaattaataaagcaataaaatattcatCAATCTCTGATAATCGCAGGCtgcagtaaataataataacttttctatgtgcatttattgttatatgcCATTtagtcacacgatccttcagaaatcaagtCAAGAGGCCTGCTTCTTCTGCTCTTCAGAGGTGGGCAGCCCCATGGACTTCTGCCTCTGGTCATACATCATCTTCTCCACCATACTGCGCGTCTCCCCGTCCAGATCCGACAGCTGCGCGCggttcagtttaaaaaaacaagtcattAATCCCCTGGTCTCGTCTAAACGCCGCTCGGGTATCGGGGTCAGCTCTTACCTTGGAGTTCTCGGGGCAGATTTTCTTGGTGTTGATTTCGGGGTCCGTGGTCACTAACCTGCTCCACCACTCCATTTTGTTTATCTGGAGTAAACGTGCATGCTCGGTCACGTCGCAATCTCAAACCAACTCCGTTTATGCACGTTAAAAAGCGTCGAATTTCGAACGCGCGCCAACCCACATTCAACGCGAAGACGTTCTAATATCAGCGCGAGCCAGGCGGCCTTAGCGGGAAAAGTTCGAAAGTTTAACTTAAGAAAAAGTTGTAATGTTCTTTGTGATCGGTTTTCGTTCCTTTACATTAAACTACACGCACATACgtgatgttttgtttacagcaaCGTAATTGTATACGATTCAAAAACTTGTTTGCTATTTCACAGCTTTGGAGAAACGTGCATTTGTATTACTTCGTCCTCGAGAGACAAGAcgagctttttttcccccccataaAGTCAAGTATCGTGATAACATTAAAGCACAAACGGTGTACTTCGTTTCTCATCCATACCTTCTCAAAATGGACGGTGACCACTTTCCCGTCCTCTATGAGCCAGGAGCTCTCCTCCACCTTCACCTCGTTGTAGAGCTGTGCGTGGATCACGGGCGGATGACCCTTCAGCCCCACCTTCAGGGAGCGCCGCTGCACGTCCACCACCACGTCCTTCCCCTTCAGGCGGAAGCTCACGTCGAACGGCACCACCAGCTGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU192129 True 1808 lncRNA 0.43 2 3496699 3498554

Neighbor


gene id symbol gene type direction distance location
tbxta ta,LOC107700831,LOC107689566,LOC108411273,LOC104926085 coding upstream 5475 3486502 ~ 3491224 (+)
LOC122323611 NA coding upstream 333057 3150077 ~ 3163642 (+)
edn2 NA coding upstream 574680 2919368 ~ 2922019 (+)
hivep3a hivep3a,LOC107708727,LOC107687396,LOC107689544,LOC107732924,LOC107595896,LOC107569862,LOC107732908 coding upstream 581990 2894544 ~ 2914709 (+)
ptprua ptprua,LOC107732911,LOC108272369 coding upstream 932143 2380621 ~ 2564556 (+)
nr0b2b NA coding downstream 5555 3504109 ~ 3508711 (+)
paqr7a LOC107567589,LOC107754930,LOC107689535 coding downstream 68460 3567014 ~ 3570984 (+)
trnau1apa LOC107754918,LOC107689564,LOC107567591 coding downstream 79424 3577978 ~ 3582390 (+)
stx12 stx12,LOC107700764,LOC107712603,LOC107689533 coding downstream 84540 3583094 ~ 3590653 (+)
ccn2b LOC107550649,LOC107700780,LOC107712605,LOC107578025,LOC107754917,LOC107689532 coding downstream 118587 3617141 ~ 3622533 (+)
G130141 NA non-coding upstream 56512 3439713 ~ 3440187 (+)
LOC122324184 NA non-coding upstream 128282 3353019 ~ 3368417 (+)
G130082 LOC103461248,LOC107835431,LOC106945151 non-coding upstream 346928 3149134 ~ 3149771 (+)
G130079 NA non-coding upstream 393112 3102944 ~ 3103587 (+)
LOC122323349 NA non-coding upstream 450815 2986542 ~ 3045884 (+)
G130168 NA non-coding downstream 17906 3516460 ~ 3518398 (+)
G130148 NA non-coding downstream 38948 3537502 ~ 3540768 (+)
G130313 LOC105892072 non-coding downstream 399507 3898061 ~ 4076098 (+)
G130315 NA non-coding downstream 431659 3930213 ~ 3935051 (+)
G130318 NA non-coding downstream 446841 3945395 ~ 3964718 (+)
G130077 NA other upstream 402985 3093067 ~ 3093714 (+)
phactr4a phactr4a,LOC107550657,LOC107687470,LOC107595895,LOC107689543 other upstream 518283 2959593 ~ 2978416 (+)
serinc2 serinc2,LOC107732928,LOC107689546,LOC107687316,LOC107708726,LOC108272915,LOC103358775 other upstream 603098 2889623 ~ 2893601 (+)
LOC122323290 NA other upstream 609071 2885413 ~ 2887628 (+)
G129993 NA other upstream 710351 2785925 ~ 2786348 (+)
sh3bgrl3 sh3bgrl3,LOC107700758,LOC107689536,LOC106570239,LOC105933927,LOC103368842 other downstream 73708 3572262 ~ 3576193 (+)
G130208 LOC107714468,LOC107559403,LOC107569308 other downstream 261313 3759867 ~ 3760985 (+)
G130372 mc5ra,LOC107746932,LOC107552309,LOC107675655,LOC107754914,LOC107566557 other downstream 746214 4244768 ~ 4259085 (+)
ptpn2b ptpn2b,LOC107738314,LOC107552315,LOC107672871,LOC107748370,LOC107666587,LOC108438851 other downstream 896031 4394585 ~ 4406579 (+)
znf706 znf706,LOC107672881,LOC103394271,LOC107748367,LOC107552318,LOC107698658 other downstream 961321 4459875 ~ 4464904 (+)

Expression



Co-expression Network