LOC122327181


Basic Information

Item Value
gene id LOC122327181
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10398269 ~ 10399548 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222364.1
ATTGTCTTCATGATGACCATCATCTCTCTGCTCCTCCTGATCTCTCTGCTTCCAAACCTGATCTTCACCGctCGTGTGAAGGTGGGGATAGTGAACGGCAAGGAAGCAAAACCCCACTCCAGACCTTACATGGTTTCTCTTCAGTTTATGGGGCACCACATCTGTGGTGGATTCCTCATCTCTGATGAGTTTGTCATGACTGCTGCACACTGCTGGAAGGGATATCCAGGTCTGACGGTTGTTGTTGGCGCTCATGACTTAAGGAAAAGTAAGCATTCATACCGCGTCGAAGTGAAGTCCTACATCCCTCATCCAGACTATCCGTTATGTTCGATTCGGAACGACATCATGCTTTTGAGGCTACAGGAAAAGGTCAACATTAACAGATATGTTAAATGGATATCGTTACCGAAGAAAGATGTCAATGGAGGCACTGTCTGTAGTGTTGCAGGCTGGGGAAGATTGTCAATGAAAGGCCGAACGAGCAGTGTTTTAATGGAGGCAAACTTgattacaataaacaataaagtgtGTAAAAATAGATGGGGACCCAAGATCTTCACCTCACGGATGATCTGTGCATATGGTTGTGGAGGATCCTGTAAAGGAGACTCTGGAGGTCCGCTGGTTTGTGGAGACACTGCAGTTGGTGTCACATCTTTTGGGTCCGGAATACGCTGCAATTCACCTGACTATCCTAATGTCTATACTGAGATTTCAGCATTTCTTCCATGGATtcacaaaactattaaaaatactgagtgaatatgaaaaacaattttCTGACAATCTTTCAATAAAATTGTTA

Function

GO: NA

KEGG:

id description
K01319 CTSG; cathepsin G

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222364.1 True 808 mRNA 0.44 5 10398269 10399548

Neighbor

gene id symbol gene type direction distance location
LOC122328190 LOC107728585,LOC107675904,LOC107726539,LOC107675906,LOC107569043,LOC107728545 coding upstream 5398 10385363 ~ 10392871 (+)
LOC122327872 LOC107728585,LOC107675904,LOC107726539,LOC107675906,LOC107569043 coding upstream 15490 10381507 ~ 10382779 (+)
LOC122328210 LOC107728584 coding upstream 19579 10376708 ~ 10378690 (+)
LOC122328213 NA coding upstream 24143 10372204 ~ 10374126 (+)
LOC122328214 NA coding upstream 27756 10369095 ~ 10370513 (+)
LOC122327821 LOC107726539,LOC107728585,LOC107675904 coding downstream 878 10400426 ~ 10401727 (+)
LOC122327820 LOC107675898,LOC107726531 coding downstream 7597 10407145 ~ 10408483 (+)
LOC122328194 NA coding downstream 10709 10410257 ~ 10412454 (+)
LOC122328195 LOC107726533,LOC107596895 coding downstream 13801 10413349 ~ 10418216 (+)
hsd11b1la hsd11b1la,LOC107719662,LOC107586454,LOC107655187,LOC100006793,LOC107675913 coding downstream 23340 10422888 ~ 10426307 (+)
G151487 NA non-coding upstream 49383 10347829 ~ 10348886 (+)
G151382 NA non-coding upstream 209097 10188578 ~ 10189172 (+)
G151373 NA non-coding upstream 210686 10185635 ~ 10187583 (+)
G151345 LOC107655225,LOC107554818,LOC107728568,LOC107687715,LOC107599463 non-coding upstream 235823 10151480 ~ 10162446 (+)
LOC122327864 NA non-coding upstream 258115 10137300 ~ 10140154 (+)
G151592 NA non-coding downstream 266508 10666056 ~ 10669212 (+)
LOC122327757 creb3l3a,LOC107729712,LOC107675914,LOC107596868,LOC107655213,LOC107719590,LOC107586456 non-coding downstream 302074 10701622 ~ 10709755 (+)
LOC122328232 NA non-coding downstream 309496 10709044 ~ 10709110 (+)
G151603 NA non-coding downstream 310965 10710513 ~ 10711972 (+)
G151624 mbd3,LOC108427158 non-coding downstream 378179 10777727 ~ 10840314 (+)
gatad2ab gatad2ab,gatad2a,LOC107599456,LOC107728574,LOC107554816 other upstream 404828 9970622 ~ 9993441 (+)
LOC122328159 NA other upstream 434635 9923547 ~ 9963634 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other upstream 487476 9895441 ~ 9910793 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other upstream 504762 9888163 ~ 9893507 (+)
G151232 NA other upstream 818118 9577679 ~ 9580151 (+)
G151620 NA other downstream 406504 10806052 ~ 10837365 (+)
onecut3a onecut3,onecut3a,LOC107596910,LOC107676954,LOC107586457,LOC107719659,LOC107655183,LOC105938949 other downstream 474880 10874428 ~ 10892023 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other downstream 518541 10918089 ~ 10922031 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other downstream 535487 10935035 ~ 10994944 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other downstream 918559 11318107 ~ 11328230 (+)

Expression


Co-expression Network