cbarpb (LOC107655224,LOC107554820,LOC107719602,LOC107728578,LOC107687734)


Basic Information

Item Value
gene id cbarpb
gene name LOC107655224,LOC107554820,LOC107719602,LOC107728578,LOC107687734
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10189214 ~ 10208785 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223124.1
GCGAGAGTGGGTGTGTTTAACGGGGGGTTGGGGCTTcattcataaatacaaaaaaagatttaaaagccCAAATTAAAGAGAAGACCGGGGAACCGTTCGCGAGCGCTTTGTCCCATGGACCGCTTGAATTATAGTTAGGGGGGACGCTCTCTCTGGCCTGGACCATGAGCAATGAGTCTGCCATATGGACAAACCAGAACAGAACTTACACCACCGACGTCCCGCTGTCATCAGGGACACAGAATGGCTATGTCCTCCTGCTGGTCCTCTTGTCCATCTTTGTCGGGGGGACACTCGTCCTGCTCTCTGTCCTTCTGATTGTCTGTCGCCGTTGTTGTGAAGGGGACAGACGCCATGCCTGGGCTAGCGATGACACCGAGAAAAGTAATACCACCTATATCGAGGAGGCCCAGCCAGTGCACGAGATTACGATTCGCGTCGATGAGTCAGATTGCCTGTCGGCAGCCAGCTCCCACGACATGGAGACAGAGCGTTTCCTCTCCACGGGCACAACCGGCCGCCGGGTCTCCTTCAACGAAGCAGCGCTCTTCGATCACAGCAAGAAAACACAGGAGAAAGGTCGAAGGTACACACTTACTGAGGGCGACTTCCATCACTTGAAGAACGCGAGGCTCACCCACCTCCACCTGCCTCCACCCGCCCTCCAGATACTCACCATCCACGAGTGTGAGTCATCAGAGAACAGTATTGCCATGACAACGCGCCCCGTCGCTAAATCCAGCCTCTCGATTTTTCAGCCACCGGTATTTTCACTGCCCCAGACTGCCCTGACCAGCCGGAGTCTCAGTCCCAGCTCTGCCCTTCCTGGCGACGCTCTCAATTCCACTGTGGACACCTCGTTCTGTGAGAGCATCACAGCGGCTGGTCCCGAGCCGTCCAGCCCGTGTCTAATAGAGGTCAGAGGAGGAGTCGGGAGAAGCACTGGCATCATGGGTAACGGTAGAGAGGGTGCTTCGGCCTCATCCACGGCCCTGTCCTCCTCTGGTGGGGCCCCGCAGGGTCCAATGCAGCAGTTCTTTACCAAGCTCCGTCGACACGCCAGCCTGGAGGGAGCGAGTCCCTACTTCAAGATCAAGAAGTGGAAGTTCGACAGCAGCCAGAGAGCTTCAAGTCTAGACATGAGAGGTTCCCCCAAGCGGAGGCAGTTCCAGCGGCAGCGTGCAGCCAGCGAGAGTATGGACCAGGAGGAGCATGACAGCCATCACATCGACCTCATCCAGTACATCGCTCGCACCAAGGACGTCACCTACTGCCCCACTCGACCTAGTCCACGTCTTCTACCCCCTTCCACACCCCCACCCTCCCTCGGCAGGTTAGAGGTGGAGGTGATGGTGGAGCCCAGCTGCAGTAGAGCGATGGGTCCCGGGGTGATCGGCCTCACCTCCGAGCCCCCGGAAGAGAGTCTTGGAATGGGCTACCATCAGGAGAGTTTAGAACCTCAGACGTTGTACCGTGATATCTGGACTCTTCGAGCCTCTCTCGAGCGGTATGTCTCGTCCGACCAGAGCAGCAACAATGACAAAGACTCCGTCCGTAGTGACGCAGACAGCGTGTGTTCTTTAGGGGGTAAAACCGAGATGGGAGGGCTGCCTAGGTACCCCTCACAGGATATTGGGGATGAGATGGAGGGTGATGCGGACTTGCCTCTAGATGAGGGATCGGAGAAAGGTCGCAAACAGGATAGCATGGATTCTGAAAGGGGAAGTGACGGGGAGCCAGGAAACCGCAAGCTGCTCCAAATGGACAGCGGTTATGCCTCGATAGAAGCACCTTCACGTGCTCCCGAGGAGTTGCGACTGTTTGGGAGTAGCAGTAGCAGTAAGGACGGCTCTGCCGTGGAGCGCAGGCACTTCTTCAGTTCTGGTCGCAAAGGGACCGTGTGCGAGAGTTTCGACACGGACATCTTCGATGAAGAACTTGAAGAGGAACCCGCGGGTGCCAGTGGAGGTGTGGACGGAGTGGAAACAGACAAGAGCACCATGCTGTGGTCCCCCTATGGCCAGATGTTCACTCAACACGAAGCTCAACCTCATCCCCCCATCCTTTCCCGCCGTGACTACAGCATTGATGAGAAAACTGATGCACTTTTCCACGAGTTCTTGCGGCACGACCCCCAGTTCGATCAGCAGGAGTCTCCGCTGCGCTCCAAACATCGTTCCCGCGTGCACCTGCGTAAGCAGTGGCAGCGCTCCAAACAGTACAGTGACCCCGGCCAGCGCTTCCAATCCTCTTTTGACCGGTACCGCACTCCACTTCGACGCGGTGAAACTGTCAACTACCCTCTAGAGACTAGCTACCACAGCACGCTCCCACGAATCATTAGTGCACCTGATGAAGAGGGCAGCGAAGGTGCAACCAGTACTCCCGAGACACCCAAAGCAGATCAGGATACTGCTACCGATGTCGACCCCGACAAGATAAGAATATCTTCCAGCACTGAAAGCAGTGGAACCCTCAACGAAAAGGAAGCCCTCGAGGCATCGCAACCCCCTCCGATGACTGACGTTGCTGGAGAGCAATCGGTGGGCCGTGAGAACTCTAGGCAAACATTGCCACCACCTGAGCCTCCTGATGAACATACACCAGAATGTACAAGCTATGGTCCACAGACAATCACAGAAGAGCTGAGCGACAAACTTGCGGCAACCCTCGAAGAGCGGCTGTACTCAGATCTCCGCAGGACCAGGGAACCCCCCGAGTGTAGTGCAGTTACTGTGACCTACACATCGCCTGATCACAGTCCAGTGTAGCATGTGGCTCCTTTCATCTCCTCGTGCAAGAACACTTCAGTGGCAACTACACGTCCAAAGTTTTGATCGACATCGACTCCAATCTGGAACAGGTTTGCTTTGGTCATTTAAATGGCCTTGAAATCATTCTCGTTATGTCCTAAACCAGTGGTGTAGAGACATTTCTTCCATGCTCAGTGTTATATAAATGGCAATTAAGGCTCATACCTCATGTTGCTCAACGCACCAAGtcttaaacaaattaaatgtcaaaGTCTGTTATTATAGCTTTCCATTTAGCTACTTGTTGACTTCAAAAGCCAATATTTTCTCTGCACTAGGTAATCCACTGTGAAATTGGGTGCTATTAGAATAAAGAttgattatatttgtaattgcaTGAATTATATTGCAATGCTGCCTATCCGGATGTCTGTTCATGACCCAAatcaatattgttttattttacttgtttttaaatgtacaagCTAGCCCTCCATTCGGTTATTACGTTTTGTTTCTGAAATTGTAAAATACTCAATACTGCTTATTATTAGCATTTGGGATTTTGTTGTGTGGTTGAACCTGCTTTCAGATTTTAGcaaaaaatgctacaaattataaatcataattgGAATAACTTGTAATCTCCTTGTATGGGTAGACATGTCTAATAATGTCACATAacctgtatttaaaaaacaactgcaTATCCGAATCACCATGACACTGGGTCAGTTCCTAAGCAAACACAAGTCCCATTTTAAATTCACAGTGTTTATAGTTTGAGttaaataaaatgggattagCTGCACATCACTAGCCGTGTTAGCTTGTTTCCCACCGACACGTTTTCAATCCATTATTAAGTGTCCTTGTCATTTAATAGTGTTAATTTACCATTGACGTAATGAATGGCTAAAACTGCCTCTTTGTGAGATACTGTAATTTTAGGACCATTTAATTAATGTGCTTTTCATCTTTTAAGTGTATCATTGTAAGTGTATTGTTGATCATATCTGCAAGAATGAGTAAAGGAGTATACAGTGCCAAACTGTTGTCAGGTAATAACGAGATAAATCACGAAAACACTATAAGCAACAGTTTGGTCCAGCAAAACAATGCTCACAGATATGCCTCTCTCTAAGGGTTTCGATCAGGCCTgagacatttttatgaatttcatTGTGAGAAGGGCATGCCTTTTCTTGCATGTATTTCACTAAATGAGCTCTGTGTGTTCGTtagcgatttttttttaaacgtgaaAATTACCAAGACAAGAATCCCTAGAGGTGGACGACTGCACATGCTGCCTTTGAACAGAAGcgttatttaaaatcatttaaagcaaATCCCACTGCCCAGCATAAGAAACTTTTGAATCTCGGCGTCAAATGGCACCATTCATGCTAATCTTAATAATTCCAGTAAAACGAGATTCTAGTATTCCTGCTCACATAATGGGTCGCATTCTGTATTGATCTTTTTGGAAGCATGCAAACAAAAGGTTGTCCTTGGCAGATTCTCAACTGTGATATGCTGAAAAGTCTATCTTTGTGAAATCTGGGCGAAAAGGCCATTGGTGGTAGAAGGTCTTGATGGAATGAAGGGCCTTGTCTATGAGGGCTCACATTGTTTTGTGGCCTTTTAGGGTGATTGTTTGAGCTGTCGAGTAGTTGTCTAAAAGCTACATGTACTATTTAGGGTGCGTCTGAAGTGGCCTGTCCAGATTTCAAAGGCTTTCATTATCTAGGTGAACAATGACTGATGCATGGAGTAATTAACAACGTTGAGAAAAGAGAGCTTCAGACTAGCTCATATTGCTGATTGATTGTTTCTGGCTAAATGAAACGTACTGACCATCTCACATGATTAATACGGTGCCTTTCTGtgtgtttaacatttaatgggatagttcaccaaaaaaaaagtccatgGAGTGAAATTCTGTGGGGTCCAATCATTGTTGTTTGGAAACCATTGACTTTCACAGCATGCGCGGAAATTGTTATAACATTATCAGTTATTCAacaaacattattcaaaatatcttcttttgtgttcaacacaTGAAAGGCAGTCACACATGATTGGAATTATGTGAAGGTGCACAAATGATGCCAGAATTTCCTTTTTGTAATGAACCGTAACATTAAGTAAGCAACTGTTATGGCCAGATCTCTGCAGAGCACTTATTTCTTATCTCCTAGTTTGTACATAATTGAATAGGCCAAATTACCGTACAGAGGTtattaaaacaggaaacaaacaaaaagctgttATTGCATTGCATAAATAGAAACCTGAAATGCGGTACTTGCATTGCATCGTCAAATACATGTACACGTGTCTTGCCGATTACAAATCCggtttttggttttgattaaCTGTAATCCATAACATGTCAGGGACAGCGAAATCTGTACAAAGGAAAGTGGAATTGTATATAAGCACAATGAGGTCCCAGTGCAGGCACTAGAATAGTCTATGTCTTGGATTTGACATAAAACTAGTTGGGACCTTTTGGTGATACAGTACGTGCACAATCAAATAGCCTGTCAGTTGATGGATTACTGTGTATAGATTTGCATGTGATGACAAACTATTGTTTAGCAGATCCAAAACGAAGCACCAAATGACAGATATTTTTTGTGTGACTCTGAGAATGAAAACAAGTAGACTTGGTACTAAaatattgtaaagtattttGAGGAGTCTGTTATTTTAGAAATTCTGCTTTGCTGACTTGATGAGATTTTTTGCCATATTTCCATGGACAAAAAGGATTATTTCTATTGCCGACTATATTTCGAtgaaagagaaaatatatttatgtgcaaaTTTCCatgtagaaaagaaaaaaatctgtaaaattctGCTTGACTAATTactcagtcaaaaaaaaaaaaatacaaataaataaataactaaataaaaagagaaagtgaGGCGTGCTTTCTGaacgtttgtttgtttacctgGATCTCTTTGTTCTAGATCTACTGAGCCTTGAGGGACCAACCAatcttaacatttattttcatgttatgttTTTCCAACTAGTCAATAAAGAACAATGCATTATGA

Function

NR:

description
PREDICTED: protein Dos

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223124.1 True 5840 mRNA 0.46 11 10189214 10208785

Neighbor

gene id symbol gene type direction distance location
si:ch211-212d10.1 NA coding upstream 116362 10070816 ~ 10072852 (+)
cilp2 cilp2,LOC107728576,LOC107687716,LOC107655229,LOC107719612,LOC107599460 coding upstream 145002 10030870 ~ 10044212 (+)
yjefn3 yjefn3,LOC107687717,LOC107655232,LOC107719609,LOC108429551,LOC107554805,LOC103041169,LOC108271278 coding upstream 160740 9996479 ~ 10028474 (+)
LOC122327676 nr2c2ap,LOC107687739,LOC107728548,LOC107554809,LOC107719618,LOC107599487 coding upstream 302997 9884512 ~ 9886217 (+)
hapln4 hapln4,LOC107728536,LOC107599484,LOC107719665,LOC107687742,LOC107554801 coding upstream 570099 9613879 ~ 9619115 (+)
fstl3 fstl3,LOC107687713,LOC107728592,LOC107569933,LOC107655223,LOC107554822,LOC107719601 coding downstream 14805 10223590 ~ 10231309 (+)
bsg bsg,LOC107728565,LOC107719600,LOC107569932 coding downstream 30292 10239077 ~ 10249861 (+)
hcn2b hcn2b,LOC107569045,LOC107569931,LOC107719599,LOC107655221,LOC108429559 coding downstream 42082 10250867 ~ 10279453 (+)
fgf22 fgf22,LOC107687712,LOC107569930,LOC107719646,LOC107655219,LOC107728567,LOC107569044 coding downstream 116790 10325575 ~ 10347666 (+)
LOC122328212 LOC107728582,LOC107687738 coding downstream 145061 10353846 ~ 10355418 (+)
G151382 NA non-coding upstream 42 10188578 ~ 10189172 (+)
G151373 NA non-coding upstream 1631 10185635 ~ 10187583 (+)
G151345 LOC107655225,LOC107554818,LOC107728568,LOC107687715,LOC107599463 non-coding upstream 26768 10151480 ~ 10162446 (+)
LOC122327864 NA non-coding upstream 49060 10137300 ~ 10140154 (+)
G151358 NA non-coding upstream 106594 10081782 ~ 10082620 (+)
G151487 NA non-coding downstream 139044 10347829 ~ 10348886 (+)
G151516 NA non-coding downstream 179765 10388550 ~ 10421036 (+)
G151592 NA non-coding downstream 457271 10666056 ~ 10669212 (+)
LOC122327757 creb3l3a,LOC107729712,LOC107675914,LOC107596868,LOC107655213,LOC107719590,LOC107586456 non-coding downstream 492837 10701622 ~ 10709755 (+)
LOC122328232 NA non-coding downstream 500259 10709044 ~ 10709110 (+)
gatad2ab gatad2ab,gatad2a,LOC107599456,LOC107728574,LOC107554816 other upstream 195773 9970622 ~ 9993441 (+)
LOC122328159 NA other upstream 225580 9923547 ~ 9963634 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other upstream 278421 9895441 ~ 9910793 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other upstream 295707 9888163 ~ 9893507 (+)
G151232 NA other upstream 609063 9577679 ~ 9580151 (+)
G151620 NA other downstream 597267 10806052 ~ 10837365 (+)
onecut3a onecut3,onecut3a,LOC107596910,LOC107676954,LOC107586457,LOC107719659,LOC107655183,LOC105938949 other downstream 665643 10874428 ~ 10892023 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other downstream 709304 10918089 ~ 10922031 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other downstream 726250 10935035 ~ 10994944 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other downstream 1109322 11318107 ~ 11328230 (+)

Expression


Co-expression Network