G20253


Basic Information

Item Value
gene id G20253
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 14988277 ~ 14989991 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU30157
tgtgacgggaggagccaacgacagacacagtgggcgtggcgtcaggcctcggagaggctttttattaacaaaaatagtacaaaataaagtgtccaaggggaaaagtgtccaaataaaaggggaaactggtgccctcgttgtgcttctgggattgtggaaggtcaggtagtgttccaggggggcagggtccaggtaaggggcggagtccggcggtcgcacgcgctcccctctcctgttcgggggcgcgaggggcggcggcttcttccgcggcatctccgtcgcttctttcctccggtcgtcagagatttaggggatttaacggctcggcatcctggcccgtcagccgtatccgggtgcagtcgtcgcctggactgtacggggtcccacgacgcgcttgtctagcggcgggacgagctccttcacgcacccttcctggacccacgaggacaccagcgtgcatgcacgggggaagagaccggtctcccgaggagagacgcggtcaggtatttaacggcgacggtgacaaggctaatccccttcaggtgcgcctcgtcacacgccgccagacctgaccgataccacgcccctcctctcgaacacacccactcccgtcgggagcctggtgaagggcggcgaataaaggacggggtgatggtgacaataaagaggaggggcagccgactcgtcaca
>TU30158
tgtgacgggaggagccaacgacagacacagtgggcgtggcgtcaggcctcggagaggctttttattaacaaaaatagtacaaaataaagtgtccaaggggaaaagtgtccaaataaaaggggaaactggtgccctcgttgtgcttctgggattgtggaaggtcaggtagtgttccaggggggcagggtccaggtaaggggcggagtccggcggtcgcacgcgctcccctctcctgttcgggggcgcgaggggcggcggcttcttccgcggcatctccgtcgcttctttcctccggtcgtcagagatttaggggatttaacggctcggcatcctggcccgtcagccgtatccgggtgcagtcgtcgcctggactgtacggggtcccacgacgcgcttgtctagcggcgggacgagctccttcacgcacccttcctggacccacgaggacaccagcgtgcatgcacgggggaagagaccggtctcccgaggagagacgcggtcaggtatttaacggcgacggtgacaaggctaatccccttcaggtgcgcctcgtcacacgccgccagacctgaccgataccacgcccctcctctcgaacacacccactcccgtcgggagcctggtgaagggcggcgaataaaggacggggtgatggtgacaataaagaggaggggcagccgactcgtcaca

Function

GO:

id name namespace
GO:0051704 multi-organism process biological_process
GO:0003006 developmental process involved in reproduction biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30157 True 690 lncRNA 0.61 2 14988277 14989991
TU30158 False 690 lncRNA 0.61 2 14988277 14989991

Neighbor

gene id symbol gene type direction distance location
mpp3a mpp3a,mpp3,LOC107654527,LOC107737916,LOC107720025,LOC107674727,LOC107591370 coding downstream 1137 14967925 ~ 14987140 (-)
baxa baxa,LOC107601305,LOC107721480,LOC107674732,LOC107720019 coding downstream 323444 14657730 ~ 14664833 (-)
gpatch8 LOC107721478,LOC107654521,LOC107674594,LOC107601302,LOC107720016 coding downstream 347149 14610261 ~ 14641128 (-)
arf2a arf2a,arf2b,LOC103045652,LOC108427419,LOC105013206,LOC107554546 coding downstream 406514 14573762 ~ 14581763 (-)
LOC122341419 LOC107601299,LOC107721482,LOC107654457,LOC107688136,LOC107720081,LOC107590425 coding downstream 432192 14462247 ~ 14556085 (-)
si:ch211-198m17.1 LOC107581740,LOC107654530,LOC107737902,LOC107674687,LOC107720027 coding upstream 2052 14992043 ~ 15009115 (-)
znf281a znf281a,LOC107581742,LOC107654531,LOC107674693,LOC107591442,LOC107720029 coding upstream 24954 15014945 ~ 15026960 (-)
svilc LOC107581739,LOC107654532,LOC107591458,LOC107674723 coding upstream 107928 15097919 ~ 15121776 (-)
cdk21 cdk21,LOC107581773,LOC107591488,LOC107674697,LOC107720098,LOC107738149,LOC107654471 coding upstream 132555 15122546 ~ 15126368 (-)
retsat.2 retsat,zgc:154169,LOC107737865,LOC107720034,LOC107674695 coding upstream 136510 15126501 ~ 15130587 (-)
G20248 NA non-coding downstream 28990 14956739 ~ 14959287 (-)
G20245 asic2,LOC107674665,LOC107737939,LOC107590420,LOC107654528,LOC102794937 non-coding downstream 136415 14849717 ~ 14851862 (-)
G20233 asic2,LOC107720021,LOC107654528,LOC107601227,LOC107674665,LOC107720082,LOC107590422 non-coding downstream 300841 14632214 ~ 14687436 (-)
G20225 NA non-coding downstream 316708 14665914 ~ 14671569 (-)
G20230 LOC107674595,LOC107720017,LOC107721479,LOC107601304,LOC107654524,LOC107590367 non-coding downstream 330796 14605029 ~ 14657481 (-)
G20344 LOC107581796,LOC107738142,LOC107654462,LOC107591562,LOC107674600,LOC107720100 non-coding upstream 262104 15252095 ~ 15254617 (-)
G20338 aldoaa,LOC107581735,LOC107720037,LOC107674678,LOC102778271,LOC103381979 non-coding upstream 290356 15280347 ~ 15333486 (-)
G20352 epn2,LOC107674690,LOC107720043,LOC107654543 non-coding upstream 329719 15319710 ~ 15324611 (-)
G20363 NA non-coding upstream 376145 15366136 ~ 15366451 (-)
G20546 NA non-coding upstream 645081 15635072 ~ 15637612 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other downstream 548736 14435147 ~ 14439541 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other downstream 783927 14202930 ~ 14204350 (-)
G19933 NA other downstream 1182299 13805368 ~ 13805978 (-)
gng13b NA other downstream 1195675 13786009 ~ 13792602 (-)
G19700 NA other downstream 1940783 13047041 ~ 13047494 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other upstream 130815 15120806 ~ 15179359 (-)
LOC122341947 NA other upstream 151826 15141817 ~ 15145608 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other upstream 608779 15598770 ~ 15600348 (-)
G20680 LOC101886504,LOC101886427 other upstream 1461149 16451140 ~ 16451800 (-)
LOC122341847 NA other upstream 1463083 16453074 ~ 16455479 (-)

Expression


Co-expression Network