LOC122329844 (LOC107563756,LOC107731666)


Basic Information

Item Value
gene id LOC122329844
gene name LOC107563756,LOC107731666
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1160237 ~ 1176071 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043226462.1
TTCCTTTGCGCGCGCGCGAGGAGACTCCGAGGGTGCACGCGCGCGCCATCTCCATCCGCGTTATTAATATTCATCTCTCTGACGGGAACGGAGGCGTTTCGATGCGATTTATAACGACACGCTTAACCTGATGATATCCTGCGGACTCGAGGGGGACATCTGAGGAGATCCTCACCTGCGCTCGTGACTAAGGTAGTGATGTCGTGATGGCTCCGCCCCAAGGGAGGCGTTCCCTCGGCCCCGTCTCACCTAAACGCATCTACAGGAGCCTGTCACTCAAGCTGAGGGGCGGGGCTTCACACAGTGAGGCGGAGCCTACTGACTGGAGGAGGAGACTGAGCAGAGGACCAGCTGAGtacTCTAGTCTGTGGGATGCTCTGGAGAATGAAGACACACTCGGGGTGCAGCATCTGTTATCCAGAGAAAGAGCGGCAGACGGTCGAGTGAACAGCGTCAGTGAGCTCGGGCTGGTGCCGCTGGACGTGGCCGCTCTTACCCATAATGCACCACTGCTGCAGGTGCTGGTGAAGGCTGGGGCCAAACACAACCCCACCTTGAGCTCTGCCTCTGATTGGTCGCTGAAGCTGGAAGAACTGGTGTCATTGGCTGAGCAGAAGGTGGAGGAGTGGAGGGCGGAGCTTCTGCTGAGAGAGAAGGCGGAGCTTCAgccacagacagacacacagaagaaTGTGGATCTCTGGACGCGTCGACTAGAACTTTACCAGAgtatgagagagagatttaACACCACCgCTCGCCCCGGGCCCCCCGCCGGAGCCGCTCTGCTGGTGACGGGCgacagctgtctgtgtgtgagagtcacTGAAGACCCCGCTCAGACACACGGCCTCGTCACCCGCTACAGAGttgagTGGAGCTCTTTGTCGAGTTTTCATCCTCTGTGTGGCACCGGATTCATCACAGACACCAGAAACCCTGAGTTCAGCATCACAGGCCTCCAGActggtgtCCAGTATTACGTGCGGGTCAGTGCGTATAACGTCAGAGGTTGGGGTTCTTTCGTGAGCAGCAGCCCGCCGTGTGTCGCTCCGTCCAGCTGGAGCTCGTGCTGCGGTGTGACTCTGAGACACAAGAACCCAGCCGCCGCTGTCAGGAGGATATCACAAGAGATCAGAGAACCAGCACTCagcgagagcAGGGTGTCAgtgaggagagtgtgtgtgtctcgtggTCTGAAGCAGCTCTTTCACTCCAGGGTGGTCCGTGTCTTACAGAGaggtGTGTACCTGGTCAGTGTGTTCTCTCAGAAGGACAGTGTTCTGGTGACGGCGGGTGATCATCTTCCTCTGGTGGAGATCCAGAGCTGCTCCACGTCTGTGTCTCAGGACTTCCTGTGGCTCTGTAAGctgTCCTGTGCGTGGACTCAGGTGCCGCAGCTGCTGCAGGTCCTGTCCTCTTCATCGTTCTCCTCGTCTTCATCTCTGCTGCAGAACAGACTCAGCTTCCTGCGGGCCGTCGCTCAGCTGCAGGCGTCGGTGGGCTGTGTGGATCTGGGTCAGCTGTACTTCGAGCCTCTGAAGGACCGGCAGGGGAACGTGCTGCTGGTGACCCTGAGAGAGGTCACGACCCCGCTGACCCCGGCTGACCCCCCGCTGCACTGGCTCCCGGTCAGCAGCCTGGAGAGGAACCAGAGCGAGACGCCGCTGCTGCCCGAACCCTCGGCCGTAGAGCAGCTCACACACCGACTCAAGgagatGCTGGCGTATCACCGGAGGAGTCAGCAGATGGCTCAGCCCGGTCTGTATGTGGGCGTCCTGAAGCTCTGCAGCTCAGTGGATCAGCTCCGGATCCTGGTTCCTCAGAAATTACCCAACATGCCCTGCCACAGCCGCGTCAGGAACCGGTCGCACGTCTCACGggagGAGTGGGCGTGGCTACAGGAGCATGCAGTGGGCGGGGCCTTTGGAGCTCGGGAGGGCGGGGATGAAGCTGTGATTGACAGCTCAGGTGTGCAGGACTTCGTGAAGGCCCTGAGATCCGCAGTGACGCACCTGCTGACCAAACTCAGCGTCCCGCTGGAGAGGgcgaGCGAGTACCGTGTTTACACACAGGAGCTGCTGCAGGTTGGAGATCAGGTGTCTGTGATTCTGCTGCTGCCGCCCTGTGAGGAGTTCAGATCCCGCCAGCGTCCGGCAGAGGGAGCTCAGCACACCTTCACCGTCCCGCTGCACTGCTTTGAGCTCGtgcacCTGTGGGTGTACGAGCAGGATCTTCTCTCTCAGTACTGTCAGCTGTGGCTCAGACTGGAGCTGGACGTCCGTCTTTCCCAGCAGGCTTTGAGAGAAGCGCTGGACACCGAGGAGCTGCAGGAGGCCACGGAGAGACTCGCACACGTCACACAGCTGGCACAGagTCTGTCTGCGCTGTGGAGTGAGAGCCGCTGGCTGATGGACGTCATTCACACGCTGCGCTCCAAAAACTCAGAGGGGGCGGTGCCTCTGGGGCGGGTCATGACCTCACGACCACCAATCAGATCAGCCGCTGATGAGGCCACGCCCACCGCTTTACATCCAGCAGAACAGACACAAACCGAGGTcacggggtcagaggtcagcacGCCTGTGGAGGTCACAGAGGTCACAGGCGGGGTCACGTGTCCGGAGTCGCCCCCTCGCACCACACCGACAGCCTCCAGCCGCCGTCTCCCGAGCTCGGCGAGGGTCAGGAGCTGCTGACGGAGATGATGGAGCTGTTCCAGAGCCTGGATCTGCTGGGAGGGGGCCTCACGGACCCCCAGGAGCCGGACTGGAGCGATCCAGAGCCCGACCTGCAGAGCCAGGAGCAGGACGATGGTGCCGTGACCCGCAGGGACCATCCGGTGCGGAGTCTGGTGGAGTGGGTCAAATCAACGGTTTAATCAAACCCAGGCCGGACTAGAGGTGGCCTTAAAGTGCCGTTATTATGGGTAACGAAGGGTTCATATTCTGGGTTCGGGAGTCccccaacaacaaaaaacacttgtatgcatttaatttcaccTTCTCTgctcaacgattcatttttaCAAACCCCTCCTTTTCTTTGTGATTCCACTCTGATTGGTCTCGCTGATCTCTTCAGGCCTGTAATGTctgataaagcagcgtttggGAGTTTATTTCAGCGCTcgaaagcggcacctagtggtgaagaattaCTTTGCATTTTCCTTCAGACCAACACGAAAGAGCGGTCATCAACATGAAGCCGATTCGTGAGAGTGGACTCTTTCTATCCAGACGATGAATCACGTGAGATCCACTGAACCTGACTCTCCGGTCTCAGAGCAAACTCATAAATGAATGAGAAACATGTCAAATctaattatacacacacttcacttttaatggtgttttagtattttgaatgcatttaatatattatagtttaaacAAAGCATTCGTGACGGGTTTGAAAGGGTTTGGTTCTCCCATCAATAGTTTGGACAGATGCTcatctcaaaaataaatatagtaaattattatattatgaaattgtattattatataattcagtaataatgttataaattaaataaaaatagtgcatatgtataatatattgtatcTTTTGTT
>XM_043226470.1
TTCCTTTGCGCGCGCGCGAGGAGACTCCGAGGGTGCACGCGCGCGCCATCTCCATCCGCGTTATTAATATTCATCTCTCTGACGGGAACGGAGGCGTTTCGATGCGATTTATAACGACACGCTTAACCTGATGATATCCTGCGGACTCGAGGGGGACATCTGAGGAGATCCTCACCTGCGCTCGTGACTAAGGTGATGTCGTGATGGCTCCGCCCCAAGGGAGGCGTTCCCTCGGCCCCGTCTCACCTAAACGCATCTACAGGAGCCTGTCACTCAAGCTGAGGGGCGGGGCTTCACACAGTGAGGCGGAGCCTACTGACTGGAGGAGGAGACTGAGCAGAGGACCAGCTGAGtacTCTAGTCTGTGGGATGCTCTGGAGAATGAAGACACACTCGGGGTGCAGCATCTGTTATCCAGAGAAAGAGCGGCAGACGGTCGAGTGAACAGCGTCAGTGAGCTCGGGCTGGTGCCGCTGGACGTGGCCGCTCTTACCCATAATGCACCACTGCTGCAGGTGCTGGTGAAGGCTGGGGCCAAACACAACCCCACCTTGAGCTCTGCCTCTGATTGGTCGCTGAAGCTGGAAGAACTGGTGTCATTGGCTGAGCAGAAGGTGGAGGAGTGGAGGGCGGAGCTTCTGCTGAGAGAGAAGGCGGAGCTTCAgccacagacagacacacagaagaaTGTGGATCTCTGGACGCGTCGACTAGAACTTTACCAGAgtatgagagagagatttaACACCACCgCTCGCCCCGGGCCCCCCGCCGGAGCCGCTCTGCTGGTGACGGGCgacagctgtctgtgtgtgagagtcacTGAAGACCCCGCTCAGACACACGGCCTCGTCACCCGCTACAGAGttgagTGGAGCTCTTTGTCGAGTTTTCATCCTCTGTGTGGCACCGGATTCATCACAGACACCAGAAACCCTGAGTTCAGCATCACAGGCCTCCAGActggtgtCCAGTATTACGTGCGGGTCAGTGCGTATAACGTCAGAGGTTGGGGTTCTTTCGTGAGCAGCAGCCCGCCGTGTGTCGCTCCGTCCAGCTGGAGCTCGTGCTGCGGTGTGACTCTGAGACACAAGAACCCAGCCGCCGCTGTCAGGAGGATATCACAAGAGATCAGAGAACCAGCACTCagcgagagcAGGGTGTCAgtgaggagagtgtgtgtgtctcgtggTCTGAAGCAGCTCTTTCACTCCAGGGTGGTCCGTGTCTTACAGAGaggtGTGTACCTGGTCAGTGTGTTCTCTCAGAAGGACAGTGTTCTGGTGACGGCGGGTGATCATCTTCCTCTGGTGGAGATCCAGAGCTGCTCCACGTCTGTGTCTCAGGACTTCCTGTGGCTCTGTAAGctgTCCTGTGCGTGGACTCAGGTGCCGCAGCTGCTGCAGGTCCTGTCCTCTTCATCGTTCTCCTCGTCTTCATCTCTGCTGCAGAACAGACTCAGCTTCCTGCGGGCCGTCGCTCAGCTGCAGGCGTCGGTGGGCTGTGTGGATCTGGGTCAGCTGTACTTCGAGCCTCTGAAGGACCGGCAGGGGAACGTGCTGCTGGTGACCCTGAGAGAGGTCACGACCCCGCTGACCCCGGCTGACCCCCCGCTGCACTGGCTCCCGGTCAGCAGCCTGGAGAGGAACCAGAGCGAGACGCCGCTGCTGCCCGAACCCTCGGCCGTAGAGCAGCTCACACACCGACTCAAGgagatGCTGGCGTATCACCGGAGGAGTCAGCAGATGGCTCAGCCCGGTCTGTATGTGGGCGTCCTGAAGCTCTGCAGCTCAGTGGATCAGCTCCGGATCCTGGTTCCTCAGAAATTACCCAACATGCCCTGCCACAGCCGCGTCAGGAACCGGTCGCACGTCTCACGggagGAGTGGGCGTGGCTACAGGAGCATGCAGTGGGCGGGGCCTTTGGAGCTCGGGAGGGCGGGGATGAAGCTGTGATTGACAGCTCAGGTGTGCAGGACTTCGTGAAGGCCCTGAGATCCGCAGTGACGCACCTGCTGACCAAACTCAGCGTCCCGCTGGAGAGGgcgaGCGAGTACCGTGTTTACACACAGGAGCTGCTGCAGGTTGGAGATCAGGTGTCTGTGATTCTGCTGCTGCCGCCCTGTGAGGAGTTCAGATCCCGCCAGCGTCCGGCAGAGGGAGCTCAGCACACCTTCACCGTCCCGCTGCACTGCTTTGAGCTCGtgcacCTGTGGGTGTACGAGCAGGATCTTCTCTCTCAGTACTGTCAGCTGTGGCTCAGACTGGAGCTGGACGTCCGTCTTTCCCAGCAGGCTTTGAGAGAAGCGCTGGACACCGAGGAGCTGCAGGAGGCCACGGAGAGACTCGCACACGTCACACAGCTGGCACAGagTCTGTCTGCGCTGTGGAGTGAGAGCCGCTGGCTGATGGACGTCATTCACACGCTGCGCTCCAAAAACTCAGAGGGGGCGGTGCCTCTGGGGCGGGTCATGACCTCACGACCACCAATCAGATCAGCCGCTGATGAGGCCACGCCCACCGCTTTACATCCAGCAGAACAGACACAAACCGAGGTcacggggtcagaggtcagcacGCCTGTGGAGGTCACAGAGGTCACAGGCGGGGTCACGTGTCCGGAGTCGCCCCCTCGCACCACACCGACAGCCTCCAGCCGCCGTCTCCCGAGCTCGGCGAGGGTCAGGAGCTGCTGACGGAGATGATGGAGCTGTTCCAGAGCCTGGATCTGCTGGGAGGGGGCCTCACGGACCCCCAGGAGCCGGACTGGAGCGATCCAGAGCCCGACCTGCAGAGCCAGGAGCAGGACGATGGTGCCGTGACCCGCAGGGACCATCCGGTGCGGAGTCTGGTGGAGTGGGTCAAATCAACGGTTTAATCAAACCCAGGCCGGACTAGAGGTGGCCTTAAAGTGCCGTTATTATGGGTAACGAAGGGTTCATATTCTGGGTTCGGGAGTCccccaacaacaaaaaacacttgtatgcatttaatttcaccTTCTCTgctcaacgattcatttttaCAAACCCCTCCTTTTCTTTGTGATTCCACTCTGATTGGTCTCGCTGATCTCTTCAGGCCTGTAATGTctgataaagcagcgtttggGAGTTTATTTCAGCGCTcgaaagcggcacctagtggtgaagaattaCTTTGCATTTTCCTTCAGACCAACACGAAAGAGCGGTCATCAACATGAAGCCGATTCGTGAGAGTGGACTCTTTCTATCCAGACGATGAATCACGTGAGATCCACTGAACCTGACTCTCCGGTCTCAGAGCAAACTCATAAATGAATGAGAAACATGTCAAATctaattatacacacacttcacttttaatggtgttttagtattttgaatgcatttaatatattatagtttaaacAAAGCATTCGTGACGGGTTTGAAAGGGTTTGGTTCTCCCATCAATAGTTTGGACAGATGCTcatctcaaaaataaatatagtaaattattatattatgaaattgtattattatataattcagtaataatgttataaattaaataaaaatagtgcatatgtataatatattgtatcTTTTGTT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107563756

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043226462.1 True 3578 mRNA 0.56 18 1160237 1176071
XM_043226470.1 False 3575 mRNA 0.56 18 1160237 1176071

Neighbor

gene id symbol gene type direction distance location
LOC122330224 NA coding upstream 2798 1154623 ~ 1157439 (+)
LOC122330518 NA coding upstream 55058 1102861 ~ 1105179 (+)
LOC122330159 NA coding upstream 58137 1090492 ~ 1102100 (+)
LOC122329984 NA coding upstream 70604 1085289 ~ 1089633 (+)
LOC122330011 NA coding upstream 75348 1078933 ~ 1084889 (+)
LOC122330304 LOC107561208,LOC107727047,LOC107679470 coding downstream 161 1176232 ~ 1179341 (+)
kcnj4 kcnj4,LOC107711802,LOC107679476,LOC107727044 coding downstream 11947 1188018 ~ 1198038 (+)
sox10 sox10,LOC107674484,LOC107711804,LOC107563722,LOC107727045,LOC107679477 coding downstream 41450 1217521 ~ 1224917 (+)
LOC122329817 LOC100537134 coding downstream 53930 1230001 ~ 1234904 (+)
LOC122332730 NA coding downstream 196461 1372532 ~ 1374290 (+)
G15911 NA non-coding upstream 7009 1152825 ~ 1153228 (+)
G15886 NA non-coding upstream 26445 1120640 ~ 1133792 (+)
G15887 NA non-coding upstream 28762 1129892 ~ 1131475 (+)
G15889 NA non-coding upstream 36937 1121340 ~ 1123300 (+)
G15883 NA non-coding upstream 42571 1117223 ~ 1117666 (+)
G15925 NA non-coding downstream 37254 1213325 ~ 1213628 (+)
G15927 NA non-coding downstream 39245 1215316 ~ 1215605 (+)
G15929 NA non-coding downstream 64275 1240346 ~ 1241047 (+)
LOC122330723 NA non-coding downstream 103192 1279263 ~ 1281171 (+)
LOC122330682 NA non-coding downstream 207177 1383248 ~ 1384894 (+)
LOC122330066 NA other upstream 109086 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 150806 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 384703 754430 ~ 775534 (+)
LOC122330407 NA other upstream 523998 625364 ~ 636239 (+)
G15563 NA other upstream 603156 553698 ~ 557081 (+)
G15939 NA other downstream 114898 1290969 ~ 1291564 (+)
G15955 NA other downstream 214668 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 219776 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 383316 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 443241 1619312 ~ 1865229 (+)

Expression


Co-expression Network