baxa (baxa,LOC107601305,LOC107721480,LOC107674732,LOC107720019)


Basic Information

Item Value
gene id baxa
gene name baxa,LOC107601305,LOC107721480,LOC107674732,LOC107720019
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 14657730 ~ 14664833 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043233826.1
CTTGAGTTCAACCAGAATGTTAGTTAGAGGCCTGTTATCCgtgattatttaattacatttaaacaactgTACAATCTTTGTAACGACACGAGCGCGTCATGTGGCTGGTTGCCGTCTAATTTGAGTGTTTTAAGAAGtgTGCCGCATGAGAATCTTTAGCGACTTCCTTCCTGTCCAAAAATCGACGTCACGCAGCGGAAGAGTTTTCACTTATTTTCAGGCTAATATGGCAGCGCCGTCGGGTGGAGGCGATACGGGCATTGGCAATGACCAGATAATTTCCTTGGGAGCCGCTCTTCTCAATAACTTCGTCTACGAACGAGTTCGTCGCCATGGAGACAGTGAAGCTGAATTAACCCGGAGTCAGCTGGGTGGTGTTGAGCTGTGCGACCCCAGCCATAAACGCCTCGCGCAGTGTTTGCAGCAGATTGGAGATGAGCTGGATGGAAATGTGCAGCTGCAAAGTATGTTGAATGACTCCACTCTCCAACCCACCCAAGAAGTCTTCATGAAAGTGGCGCGGGAAATTTTCTCTGATGGGAAGTTCAACTGGGGCAGAGTGGTAGCGCTTTTCTACTTTGCGTGTCGGCTTGTTATCAAGGCTATTATAACCAGAATTCCTGACATCATCAGAACCATCATAAACTGGACTATGTCTTACATTCAGGAACACGTTATTAATTGGATCAGGGAACAGGGTGGATGGGAGGGAATCCGCTCCTATTTTGGAACCCCGACATGGCAGACTATCGGCGTTTTCCTGGCTGGGGTGCTCACCACAGTGCTGGTGATCCGCAAAATGTGAACAGACTGGCAGGAaggtggagagaaagagaagcgaGAGTTGAGACGATGAACAGAGGGTGAAACAGACCAGCAAAAGAGAACAGAAAGATGAGGGGGAAGAGGAAGGGATTTGGAGAAGAGATACAAAGAAAAAGACAGTTAAAGAGCGTTAAAAATGGCCTCAGCTAATCAAAAACAATGAGGgagggaggaggaagaggaaagagCGAGAGTCAAGAATGATGCAGATGTCTTGAGCCAGTCTTGTTGCTCCTGAGCTTGTGCTCTTTCAATTTTGACAACATTTGCACTGAAAATCAGAGATTAATGCGTAAGTTCAGGTTTAGGCTTTATTtgagctatttatttttaatttgggcTTATAGGTGTGTAGGTTATATACAGGACTGTAGTGGTATTTGATTTAATCTGTTGAAATGCTGAAATTTCACATTAAGTTAAgttctttttattatgttatttttagtttttcctcTACAGTCAAAACGACATATGATAAATAGATGCATTACCTTATAaatggaattattattattactattattaatatattattcttaGCATTAAGATAAAAGCATAATTGTATCTGTCCTTTTTTAGTGCACTGTCATTTGAAAGAGTGGGAATGGGCTCAGACTGTATTCTGCTGATATTTTAATTTCCTATCTCTTCCTCGTCCTCctcgtctttttttttcactgtctCTAGTTCTTCACGGTAGGGACTATGAAATAACTGTAAAGGTTATTGTACTTGAAGGTTGAGCCTCTTAAGAGTTCATGAAATGTTTGCAACAGCGTTTTGAGAAGTGCAGCCAACCAATCATCACTCTGGTTGTGGTGTGTGGGTGTGTCTTCGTCAGTAAGCCCCTCCCACGAAAGGGATGGATAAAACTAGTGACTCTTAAACACATTGAATTTCTCTGAGCCATGATGATCTCGTTTTTTGCAGAAccaaatattttccttttcaaattCCTTTTGGATTCGACAATCCAAAGACTTCAGATGCAGGTGCAGACTCTCTGACAAAAAAGCAGTTTGTTTGGCTTGAGCTGGTGCAAACATACGCTCTTGCAGGACTTACAGGCCGATTAGTTGAGCTTCTTTTCTCAGCAAGGTCTTCtcagtactgtatttttaagatggTTAGCCAGACCCACAATCCTACTTTTACATGCaattgttctttctttcttttttttaatatacttgtTTCTTTATCTTTTGGCTGTTTGGATACAGTTtcataatcttttatttttggttcTTTCGTTGACAGTGCCTTGGCCTTTTTATGATATTAGCCACcactttttcatctttttctacATCTTTGTAAACTGGTATAAAATTGTGCACCCTAAGGCAGTTTGTCTGCTGTGTGAGCCCATGAGTTTGTTTTGTAAGTcgtaaaattaaacaataaattgtttttatggATTTCAA

Function

symbol description
baxa Predicted to enable channel activity; protein heterodimerization activity; and protein homodimerization activity. Acts upstream of or within several processes, including positive regulation of cysteine-type endopeptidase activity involved in apoptotic process; response to cadmium ion; and response to methylmercury. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrial outer membrane. Is expressed in several structures, including digestive system; female organism; heart; immune system; and male organism. Human ortholog(s) of this gene implicated in acute lymphoblastic leukemia; ataxia telangiectasia; colon adenocarcinoma; and colorectal cancer. Orthologous to human BAX (BCL2 associated X, apoptosis regulator).

NR:

description
PREDICTED: apoptosis regulator BAX-like

GO:

id name namespace
GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0001836 release of cytochrome c from mitochondria biological_process
GO:0097192 extrinsic apoptotic signaling pathway in absence of ligand biological_process
GO:0046686 response to cadmium ion biological_process
GO:0051597 response to methylmercury biological_process
GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage biological_process
GO:0008053 mitochondrial fusion biological_process
GO:0005741 mitochondrial outer membrane cellular_component
GO:0015267 channel activity molecular_function
GO:0042803 protein homodimerization activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K02159 BAX; apoptosis regulator BAX

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043233826.1 True 2255 mRNA 0.41 7 14657730 14664833

Neighbor

gene id symbol gene type direction distance location
gpatch8 LOC107721478,LOC107654521,LOC107674594,LOC107601302,LOC107720016 coding downstream 16602 14610261 ~ 14641128 (-)
arf2a arf2a,arf2b,LOC103045652,LOC108427419,LOC105013206,LOC107554546 coding downstream 75967 14573762 ~ 14581763 (-)
LOC122341419 LOC107601299,LOC107721482,LOC107654457,LOC107688136,LOC107720081,LOC107590425 coding downstream 101645 14462247 ~ 14556085 (-)
LOC122341422 LOC107654457,LOC107601299,LOC107720081,LOC107688136,LOC107721482 coding downstream 195483 14459822 ~ 14462247 (-)
tubg1 tubg1,LOC107721485 coding downstream 242133 14404974 ~ 14415597 (-)
mpp3a mpp3a,mpp3,LOC107654527,LOC107737916,LOC107720025,LOC107674727,LOC107591370 coding upstream 303092 14967925 ~ 14987140 (-)
si:ch211-198m17.1 LOC107581740,LOC107654530,LOC107737902,LOC107674687,LOC107720027 coding upstream 327210 14992043 ~ 15009115 (-)
znf281a znf281a,LOC107581742,LOC107654531,LOC107674693,LOC107591442,LOC107720029 coding upstream 350112 15014945 ~ 15026960 (-)
svilc LOC107581739,LOC107654532,LOC107591458,LOC107674723 coding upstream 433086 15097919 ~ 15121776 (-)
cdk21 cdk21,LOC107581773,LOC107591488,LOC107674697,LOC107720098,LOC107738149,LOC107654471 coding upstream 457713 15122546 ~ 15126368 (-)
G20230 LOC107674595,LOC107720017,LOC107721479,LOC107601304,LOC107654524,LOC107590367 non-coding downstream 249 14605029 ~ 14657481 (-)
G20231 NA non-coding downstream 53516 14603194 ~ 14604214 (-)
G20212 NA non-coding downstream 198176 14433705 ~ 14459554 (-)
G20217 LOC107601298,LOC107721528,LOC107590427,LOC107720013,LOC107688135,LOC107654518 non-coding downstream 206702 14449475 ~ 14451028 (-)
G20202 NA non-coding downstream 269332 14385361 ~ 14388398 (-)
G20225 NA non-coding upstream 1081 14665914 ~ 14671569 (-)
G20245 asic2,LOC107674665,LOC107737939,LOC107590420,LOC107654528,LOC102794937 non-coding upstream 184884 14849717 ~ 14851862 (-)
G20248 NA non-coding upstream 291906 14956739 ~ 14959287 (-)
G20253 NA non-coding upstream 323444 14988277 ~ 14989991 (-)
G20344 LOC107581796,LOC107738142,LOC107654462,LOC107591562,LOC107674600,LOC107720100 non-coding upstream 587262 15252095 ~ 15254617 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other downstream 218189 14435147 ~ 14439541 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other downstream 453380 14202930 ~ 14204350 (-)
G19933 NA other downstream 851752 13805368 ~ 13805978 (-)
gng13b NA other downstream 865128 13786009 ~ 13792602 (-)
G19700 NA other downstream 1610236 13047041 ~ 13047494 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other upstream 455973 15120806 ~ 15179359 (-)
LOC122341947 NA other upstream 476984 15141817 ~ 15145608 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other upstream 933937 15598770 ~ 15600348 (-)
G20680 LOC101886504,LOC101886427 other upstream 1786307 16451140 ~ 16451800 (-)
LOC122341847 NA other upstream 1788241 16453074 ~ 16455479 (-)

Expression


Co-expression Network