zgc:113090 (LOC107729437,LOC107658438,LOC107577287,LOC107737781)


Basic Information

Item Value
gene id zgc:113090
gene name LOC107729437,LOC107658438,LOC107577287,LOC107737781
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12276835 ~ 12279429 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234746.1
aaaaaaaaaaaaaagacgtgaGATTGAGCCGTTTCCTCCAGGATTGATTAATCAAGTGATAAACaccattaacatattttaaggTTCATTGTTTGTAACCCTAGAAACAGTCGAATCTTTGACAGGGTACACAGGAAGCAGTTCGCGCGCGTAGTAAAGGAAGTAGAACGTCACTAACATGCGTTTCCACAACACGGCCACTAGAAACGTCATTATCACACAGTCAGCATTGACATTTCCTGAAAGAAAACAACTACATACCCTAAAGATACAAATATCATGAGACACTTCTTATTTTCTGGCATTAGTTCACGGTTTACCTTTCTGACATTGTTGCCTCGTTATATTTGCGCTTGAGAACAGAAAGGTCCTGTCAGAATGTCTCAGATGGAGCTCCTTGTCACAAATGTAGCTGAGCTCCTCACTGCTGCTGTACAGGAAGTGTTGCAGCTCATGGGTCAGGCTGTGTTCGAGTATCAGAAAGAGTCTGCCAGAACACGCCTGGAGAATCAGACCCTCCAGCAGAAGCTCAAACAGCTCCAGCAGGCGATGACTGGGGATTCAAatgaagTGCTGAAAGCCTCTCTACCCATTGAGAAGCCTCATTTAGAGGAGGATCACGCCCAAGAAGATCTAATTTATCTCGGAGATTCAGCTGTGAACGAGCAGTCAGAGCAGCCACAATGTCCGAATGACAATCCTGTTCACATGAAGATGGTTTTAGATGAGATTACTTTAGACAGCAGGCATCATACTCTGCAAGGCACCTGTGACTATTCTTTGAAGAAGCAGAGACCCCTCTCCGGGGTAAAGAGAAGCCCTCCAAAAAGAATCCCAAACTCTTTCAGCGGAGAGAGTCCAGCGACCAGCAACGCTGAAACACCACCGGGCTCAAACAGAATCAAAGACGAATCTAAACCAGAGCCTCTGGACTGTTCTGTTACAGAAGAGACAGATGCTGTGAGAACACAAGCTCCTGTAGTTCTCCCGCAGGACGTTCCTCCAGCAAACGAACACAACCAGCTGCCTGTCTTGTCCTTTCCCAACAGCGTCGTCCACTATGACCAACTAGGCAAATTACTTACTTCTGCTTCCAAACACATTCTCAGGTCAAGGGTGGAGAATATGGTCCAAACGGGGGGCGTCCACGGCACCCCCAGCGTCAGCGAAAGCAGGGAGATTCTGCACAGCTGCCACGTGTGCGGCAAGAGCTTCGCTACGCCCTCCAGCCTCGGAGCGCACTTCGTGTGCCATTCAAACGAGAGACCTTTCGTTTGCAAGTGCTGCAAGTTCAGGTTCAGTCGTTTAGCCGATCTGAAAAAGCACGAGCGCATTCATACAGGAGAAAGGCCATATAACTGTTCACTCTGTGGACGGAGATTTAACCGAACAGAGAATCTCAGAAGACACTTGAGGAAGATTCACTATGGAGCAGTGctgtgagctttagatcccttcatttattttagcatgttGACTTGGGATCTTTCAAAGTCATGGCTTATTCATATCTTAAATGTTACTATAGTCATTTCATGCATTAGGCCTGTTTTCTAATATAGGATGTTGCcatcaaattaaattcaaataaatattaatcaatatCAGTGATGTAGCTGAAATATGATTACCGTGTATTACCCTATATTTTTCTGATGAGAATACATATTTGGTCAAATTCTCACCAAAGTGCAGCATTCCACTGGattcttgtttttaatattgtttgcCTTTAAAGCAGTGTTCTTTTATtccatttgtgtgtttttgtcagttttttatatattaaaaaaagtacaaaaatgtatacactaccatttaaaaaaaaactaaagtaaatgtTATTGAAAGCAGAATAAAATCTCGCCAAGGCTGCacttattacagaaaaatacagtaaaacagtaatatggtGAAACAGTATTACAATTagttttagtgctgtcaaattattcaTTGCGATTAaccgcatccaaaataaaagtttttgtttgca

Function

NR:

description
PREDICTED: zinc finger protein Gfi-1b-like

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234746.1 True 1996 mRNA 0.42 3 12276835 12279429

Neighbor

gene id symbol gene type direction distance location
pheta2 zgc:153733,LOC107658512,LOC107729468,LOC107582989,LOC107554091,LOC107689645 coding downstream 21057 12251917 ~ 12255778 (-)
mylpfa mylpf,mylpfa,LOC107582990,LOC108249004,LOC108274226 coding downstream 26905 12246754 ~ 12249930 (-)
si:ch73-248e21.5 NA coding downstream 136069 12136718 ~ 12140766 (-)
si:ch73-248e21.7 NA coding downstream 140622 12132596 ~ 12136213 (-)
tspan4b tspan4b,LOC107729542,LOC107658498,LOC107554115,LOC107730770,LOC108427360,LOC107583081 coding downstream 145036 12127010 ~ 12131799 (-)
kat7a LOC107689642,LOC107554133,LOC107737751,LOC107729527,LOC107582986,LOC107658517,LOC108437993 coding upstream 279 12279708 ~ 12287876 (-)
g6pc1b g6pcb,LOC107582985,LOC107729528,LOC107658515,LOC107554093 coding upstream 8993 12288422 ~ 12290984 (-)
aoc2 aoc2,LOC107658518,LOC107729559,LOC107582984,LOC107689706 coding upstream 17625 12297054 ~ 12300573 (-)
LOC122336412 LOC107658520,LOC107554095,LOC107582983,LOC107729569,LOC107689640,LOC107737779 coding upstream 36021 12315450 ~ 12320066 (-)
LOC122342092 LOC107758479 coding upstream 42815 12322244 ~ 12332841 (-)
LOC122341243 LOC107729463,LOC107658509,LOC107582987 non-coding downstream 5899 12265845 ~ 12270936 (-)
G19518 LOC107729456,LOC107658501,LOC107582995,LOC107554123,LOC107689649,LOC107737759 non-coding downstream 46456 12226575 ~ 12230379 (-)
G19503 NA non-coding downstream 94351 12182258 ~ 12182484 (-)
G19463 NA non-coding downstream 179473 12092899 ~ 12097362 (-)
G19453 LOC107583009,LOC107729419,LOC107658421,LOC107730751,LOC107554101,LOC107689664 non-coding downstream 190614 12085329 ~ 12086221 (-)
LOC122332655 NA non-coding upstream 14711 12294140 ~ 12295423 (-)
G19677 LOC107737766 non-coding upstream 584881 12864310 ~ 12886954 (-)
G19672 alkbh7,LOC107723204,LOC107690706 non-coding upstream 621352 12900781 ~ 12902910 (-)
LOC122332187 NA non-coding upstream 793131 13072560 ~ 13072828 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding upstream 800641 13080070 ~ 13080621 (-)
LOC122341756 NA other downstream 356068 11909775 ~ 11920767 (-)
G19383 NA other downstream 395876 11853748 ~ 11880959 (-)
limd2 limd2,LOC107674139,LOC107658411,LOC107721965 other downstream 548834 11712820 ~ 11728001 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other downstream 562116 11694272 ~ 11714719 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other downstream 847656 11411985 ~ 11429179 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other upstream 59758 12339187 ~ 12343872 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other upstream 343354 12622783 ~ 12679800 (-)
cacna1aa LOC107690704,LOC107571502 other upstream 402561 12681990 ~ 12763090 (-)
G19676 LOC107690708 other upstream 726567 13005996 ~ 13068190 (-)
G19700 NA other upstream 767612 13047041 ~ 13047494 (-)

Expression


Co-expression Network