gpatch8 (LOC107721478,LOC107654521,LOC107674594,LOC107601302,LOC107720016)


Basic Information

Item Value
gene id gpatch8
gene name LOC107721478,LOC107654521,LOC107674594,LOC107601302,LOC107720016
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 14610261 ~ 14641128 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234931.1
TCAGTCAACAGAGGAACAAGTCGGAACGCAGGAGACGAGGCGAGCAGGAGAGAAAATGGCCGACAGATTTTCTAGATTCAACGAAGAACGTGATTTCCAGGGTGGAAATCACTTTGACCAGTATGAGGAAGGTCAGTTGGAGTTGGAACAGGCGTCTTTGGACAAGCCCATAGAATCGGATAACATTGGGCACCGGCTCCTTCAGAAACATGGCTGGAAGTTGGGTCAAGGCCTGGGCAAAACCATGCAGGGACGAACTGACCCTGTGCCCATCGTCCTCAAATATGATGTCATGGGAATGGGCCGCATGGAAATGGAGCTGGACTATGCAGAAGATGCCACAGAGAAGCGTCGGGTGTTGGAAGTGGAAAAAGAAGACACAGAGGAACAGCGGCAAAAATACAAGGATTATGCGGAGAAGGAAAAAGCCATAGCAAAAGCTTTAGAAGACCTGAGGGCCAATTTCTACTGTGAACTGTGTGATAAGCAATACCAGAAACATCAGGAGTTTGACAATCACATCAACTCCTATGATCATGCACACAAGCAGAGACTGAAGGAGTTGAAGCAGAGAGAGTTTGCCCGCAATGTGTCTTCTCGTTCCAGGAAGGATGGCAAGAAACAGGAGAAGATGTTGCGGCGGCTTCATGAACTGGcagaacagagaaaacagcaaGACCAtgtCTCTGGTAGTGGCCCTATGTTTAAAACTACCACAGTGGCAGTGGATGGAGAAAAGGGTGAGGACTCTATGGATGGAGTGCCTATGACAGTGGAAACCAACACGGAAGCTATTGAAGATAAAGGAATCTGTAGTGTTAGTGGTCAAGGCTCCCCTAGAACAGGGCCTGCCATCAGCTTTGGCTTTAACAAAGCTAGCTCTTCTCCTTCTGGAGGCTCACAGGCTCCCAAAGTGAGTGTCTCCTTCTCTTTTGCTAAGAAAGCACCAGTCAAGCTTGAGACGGCTGCTGCTGTGTTTGCAGACCATGGTGAGGAGATGGTGGAAGGAGAAGAAGGTCAGGAAGAAGGAGGAGAAAAGACTGGAGCAGAGGACATAGGTGTGGCTTCCACCACGGATATCCCtcaagcagcagcagcagcagcagcaggaggaggaggaggagaaggaggaggtggtggtggtggtggatGTGGTGGGGGGGAGGAAGACCAGTCACAGCCAGATGATGGAGGTGCCCTGGCCTCTACTTTGAACAAactgaagatgatgatgaaaaagGAGGAAGGTTACTCTGGACAGGAACCACAGTATTACCATTATGTACCACCTGCACATTGTCGGGTCAAGCCGCATTTCCAGTTTCTGCTTTTCATGAAGGCTTCAGACCAGTGTGATGGcaaggaagaggaggaagatggGACAAAAGATGATAAAGCAGTATCAGATAACGACGGAGAGCAAAAGCATATCAAAATCAGCATCTGCACATCTGAAAAAGACACTGAGAATGAACCACCACAGGCCCAAAATACAAATCCCACATCAGATACAGTGAAGGCAGAGGAAGAATCAGGAATCACACCTGCAGGGCAAAGTGATACAATAGTGGTGGATAGCTCATCCCAACAAACTGATACCAAGCAAGTAATGTCCGAGCATACAGACACAGGTCCCCGCATGCCAACTGGACCCTTCTTTCCTGTGCTAAGCAAGGATGAAAGCACCACACTGCAGTGGCCTTCTGAATTGTTGGAGTTTACTAAGGCTCAGCCATCCCTCTCCTACAGTTGTAATCCTCTTTACTTTGACTTCAAACTGTCAAGAAACAAAGGAAACTGGGCAAGCAAAAACAGCAAACCTGCCAAGCCAGTTAGCGCTGAAGGACAAGAGGGGTCTAAGCCTGAAAACACAGACAATACTCCTGCCACTAGTGGAGAGGCTTGCGCTGCTACAACGATTGCAGGATCCAGTACAGTTCAAAAAGAACAATCGTCCTTGAAAGAGGAGGGTGCTGAGAGTGAGAACAATGAGCAGAAATTACAAAGTAATGAAGATGTCTCTGCAGGGTctaagaaaaagaagaagaagaagaaacacaaGAAGTCAAGCAAGCGTTCCAAACGTAAAGAAAAAGCAGCCATGGAGGGGGAGTTAGAAAATGAGATTCCAGGAgagaaaactaaaaagaaaaagaaacacaaaagaaagaaaagcaaaaacaaaccacGTAGCACTGATGAAATTGAAGCCGAGGGAGGTGACAgcaaggaaaaagagaaagacaaggaTGACAAAGATGGAGTAGCCACTGCTCAGTCATCGGGAGTAAGCACGTCCCATGAAGGAGGAAAGAGAAAACGTTCCCACAAAATCTCTCAGTGGTCTGGAGTTGAGGAAAGCAGTGCAGGAAAGCCTAGCTCTACGGAGGAACACAATGGTACTAAACGTCTTAAACCTGACACTAACACACCTGCCGCCTCCTGCTCTGCCTCTGCCCAGAAGAGCATAAGTGGAGGTCGACCTCCAAGTAGTGACAGTGAGGAGGATGGTGGATCATCCTCTCAACGTTCTCGACCCCCTCGGCGTCGTTCTACGCCACCACGTGAGCAGCGAAGACATCGCAGTGATGATTCTGGGAGATCAGGACGTTCACGCAGTAGGTCATCTCGCCGAGGAGATCACAACCATAGACGCCACAGAGGTCAAAAGTCTCGCAGTCGATCCTACTCGAGTAGCTCTGAGCGGTCCTCAGCAGGGAGCAGTGCTTACAGTCGCCGTAGCCATAGCTATTCAGACAGTTACAGTGACTACAGCGATGAAGGACGTCGCCGCAGATCTAGAAGACCTTCCTCTGACTCGGATTATGAAAGGCGTGATAGTGGGCGATCCCACAGGCGACGTTACACCTCGTCTTCAGAGGAGGACTCCCGTTCCCGCTCCCGCTCACGCAGCCGCAGGAAGCATCATCGGCGGAGACACCAACGAAGCAGTAGTCGCAGCTCCAGTCGTAGTAGTAGGAGTAGCAGCGCTCGTTCTTACAGACGCAGCAGCTACAGTCGCAGTCGTAGCTCCGCTAGTCGCTCATCTAGCTCCACAAAGGGATCTCCACATCGGCACGGTCACAGTCGACGATCTGACAGCTCAACCCGGCGGAGAGATTTCAATCGGTCACGAATCTACCGTTCCCAGTCTCCAAGGTCCTCTTCCCGCACACAAACTCGAAACAGTAACTCGTCATCAGCGCAAGGAACAAGAAGTGGTGGTGGAGCTTCGTCAAAGGAGGGAGGAGGGGCAGCAGAGCATCGAAATTCATTCACAGCTCGACAACTCTTGGAGAAAATCCAGTCTAAAAAAGGAGGGGATGAATCTGGTACTGGCACCAAGACAGGCCTCAAAATCAAGGACCCTCCACAGGGATATTTTGGGCCCAAGCTCCCCCCTGCCCTtggaaataaaagcatgttGCCCCTTTTTGGCAAGCTCCAAGCAGGAAAGAAGCCATCGTTACTTCCTCTTACACGTTCAACCGATGGCGAAAAGTCAGAGCAAGGGAAAATTTCAGATAGTAATGAGGTTATCCTGGTAGAACCCATCCGTGAGTTtccaccaccacctcctccacctCAACCACCAGttcagcagcagcaacagcagcagcaacaacaaaagcAGCAATTGGAGGAGGCTGTATCAAGTGCAGCGGTGTCCGAGGAGACCAGACATCCACCCTCAGACCCTCCAGCCCTTCATGACTCTCAACCACAATATGAACAGGATCCAGCACTGATGATGTCTCAATACCAAGGTGAACCCAGACAAGACCCCAACAATCCCATGCTGGATGGACATTTAATGGGGCCAGAAATGGGTCCGCAGCCTACTATGCACGCCTACCCTGGTTACCCTCCCAACATGGAGGATGGGGAAATGGGCATGGAACCTGAAGAGGATGGTCTTGCACCTTtagaaagtcaaccaatcaccTTTACCCCAGAGGAAATGGAGAAATACAGCAAGTTGCAACAGGCAGCTCAACAGCACATTCAGCAGCAATTGTTAGCCAAGCAGGTGAAGACCTTCCCTTCAGCTGCAGCTGCTGCGGCAGCAGCTAATTTGGCAGCAGCGGCCAATCTTGCCCCTGCGCCTCCACCCCCACCAGCTGCACTGCAGCCTATCCACATTCAACAACCCTCAGTTTCTGCAGCTTCTGCTACCTCGATTACCACAGTCCAGCACGCAATCCTGCAGCACCATGCTGCTGCTATGGGCATCCATCCCCATACCCCACATCATCCTCACCCTGCCCATGCCCAGCTGGCCCAGGTGCACCACATACCTCAACATCATCTAACCCCTATCTCCTTGTCACCATTGGGCCATTCTTTGGGTCACTCACTGGGTCACTCTTTAGGACACACCGGCTTGATTCCAGCCCACCACACTGCCTTCCTTTCAGGCCAACCTATACATATTATACCAGCTTCAGCGCTCCATCACACCCCTCTCGCTCTACACCACGTCCCACACGCTGCCCTCTACCCAACTCTCTTTGCCCCCCGGCCAGCTACTGCTGCGGCAGCAGCTGCGCTTCAGCTACACCCACTACTTCACCCTATCTTCTCAGGACAGGACCTTCAGCACCCTCCAAACCATGGCTCCTGAAAATCCGTTTTCTCTCAAAGAGAGGGCCTGGCCCAGCCTGGCCCAGCAGTGAATAGCTAAAAAAGATTTAGCTACCGGTTGACACGATCTGGCGACACACTGTCCTCTACGTGCTCTGCTACATTAGACGGACCTCAACAGGGTTATTTAGGAGTACATTTGAATTGAGGACAGAATACGATCTTGGCTGGCATTTGAGATTGTAATGGACAGAACCAGAAGCTAGGCTGGCAGGTTGATGTATTTAAcatcatgtgtatatatatatattcacacaagGAGTATGAGTTGCAAGAATTGGTTCATAATCCAAGATGTGAATCTTATAATAACTAGGAAACCACTGGCATATTTAGTTTTCTATGGTATGTCATaaatctttgtttatttgtctaAAGCTCATTGGCTGAAGCCATAATCAAGATCTTTGTTGTAGGCTTTTAGCGTGCTTTGGTACAGTTGATATTGGGTGATATTGAGGGTCATTTTTGGAGACTTGTTTTCTGTGTACTAAGCATTCATGAAAGTTGCAGAATTTATTAACTCATtgtatgaatatgcaaatatacacTTCAGCCTGCTATACAAAAGCAGGGTGTGTTAAACTGATGATTGGTTTGCTgaaatgttgtaatattttatccTTTTCAGCTCATATCAATTATCAGAAACAGTTGTACCATACTCTAATCAAAAGGGTGTCACAAAACAACATGAACAAGATGATTCAAATAAAAGCCATACTCAGCACTCAACTGTGTTAAGCTATTTTTGCGGGTTGGTtgtaaatcaatataaattttcCAAAAATAGTGAATGGAACAGACATTGTACATGTTGATTTCAAAACTTTTATAATGTCACAGGCTGTTGAAACTACATAACAGGTTACACTTTGGGATTTGAAGGTTCCCATTCCTTGTTATTGAAATTGTGAAATCTTGcactgaaaaatgtacattttgagaTGCTGTTTTTGCATCTTGTAACAACTGTATGATTGTAGTATTCtgcaataattttattttctatttgattttaaattatttttcagatttttttgttttgttttgtttttcgaaaatgttttctttctgtacaattAGTTAAGTGTAAATAATGTTAACGTAGTGAAACTAtgtaaaataaaggtttgtaacacctgtttaaaaatgctaataaaaaaaattatgaaatggaAAA

Function

NR:

description
PREDICTED: G patch domain-containing protein 8-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234931.1 True 5827 mRNA 0.47 9 14610261 14641128

Neighbor

gene id symbol gene type direction distance location
arf2a arf2a,arf2b,LOC103045652,LOC108427419,LOC105013206,LOC107554546 coding downstream 28498 14573762 ~ 14581763 (-)
LOC122341419 LOC107601299,LOC107721482,LOC107654457,LOC107688136,LOC107720081,LOC107590425 coding downstream 54176 14462247 ~ 14556085 (-)
LOC122341422 LOC107654457,LOC107601299,LOC107720081,LOC107688136,LOC107721482 coding downstream 148014 14459822 ~ 14462247 (-)
tubg1 tubg1,LOC107721485 coding downstream 194664 14404974 ~ 14415597 (-)
cntnap1 cntnap1,LOC107721486,LOC107654512,LOC107720006,LOC107601289,LOC107590375,LOC107688128 coding downstream 254273 14328206 ~ 14355988 (-)
baxa baxa,LOC107601305,LOC107721480,LOC107674732,LOC107720019 coding upstream 16602 14657730 ~ 14664833 (-)
mpp3a mpp3a,mpp3,LOC107654527,LOC107737916,LOC107720025,LOC107674727,LOC107591370 coding upstream 326797 14967925 ~ 14987140 (-)
si:ch211-198m17.1 LOC107581740,LOC107654530,LOC107737902,LOC107674687,LOC107720027 coding upstream 350915 14992043 ~ 15009115 (-)
znf281a znf281a,LOC107581742,LOC107654531,LOC107674693,LOC107591442,LOC107720029 coding upstream 373817 15014945 ~ 15026960 (-)
svilc LOC107581739,LOC107654532,LOC107591458,LOC107674723 coding upstream 456791 15097919 ~ 15121776 (-)
G20231 NA non-coding downstream 6047 14603194 ~ 14604214 (-)
G20212 NA non-coding downstream 150707 14433705 ~ 14459554 (-)
G20217 LOC107601298,LOC107721528,LOC107590427,LOC107720013,LOC107688135,LOC107654518 non-coding downstream 159233 14449475 ~ 14451028 (-)
G20202 NA non-coding downstream 221863 14385361 ~ 14388398 (-)
G20095 LOC107719998,LOC107601286,LOC107688145,LOC107590379 non-coding downstream 388464 14220085 ~ 14221797 (-)
G20225 NA non-coding upstream 24786 14665914 ~ 14671569 (-)
G20245 asic2,LOC107674665,LOC107737939,LOC107590420,LOC107654528,LOC102794937 non-coding upstream 208589 14849717 ~ 14851862 (-)
G20248 NA non-coding upstream 315611 14956739 ~ 14959287 (-)
G20253 NA non-coding upstream 347149 14988277 ~ 14989991 (-)
G20344 LOC107581796,LOC107738142,LOC107654462,LOC107591562,LOC107674600,LOC107720100 non-coding upstream 610967 15252095 ~ 15254617 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other downstream 170720 14435147 ~ 14439541 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other downstream 405911 14202930 ~ 14204350 (-)
G19933 NA other downstream 804283 13805368 ~ 13805978 (-)
gng13b NA other downstream 817659 13786009 ~ 13792602 (-)
G19700 NA other downstream 1562767 13047041 ~ 13047494 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other upstream 479678 15120806 ~ 15179359 (-)
LOC122341947 NA other upstream 500689 15141817 ~ 15145608 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other upstream 957642 15598770 ~ 15600348 (-)
G20680 LOC101886504,LOC101886427 other upstream 1810012 16451140 ~ 16451800 (-)
LOC122341847 NA other upstream 1811946 16453074 ~ 16455479 (-)

Expression


Co-expression Network