znf281a (znf281a,LOC107581742,LOC107654531,LOC107674693,LOC107591442,LOC107720029)


Basic Information

Item Value
gene id znf281a
gene name znf281a,LOC107581742,LOC107654531,LOC107674693,LOC107591442,LOC107720029
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 15014945 ~ 15026960 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235008.1
GGACCCGTCGGCGCTACCCACAGTTCCCCGCGCTCAGACAAGATGGAGGAACGCAGCAGCTGCGGGAGAACAATGTTTGGACTCTGAACGTTAAAAAGAAACGATCGAGGGGGGAAATACACAAAGAGAGAGCCAACGGTGGACATGCACTGGATGAGTGAGGTGGCCTTGCATTGAAGCAGACCCCGTCACCCCCGTTCCAGCATCAGCGTCAGTGTGATATCGCTCTGAGCCTTGCCCCTTCAACATGAGCCTGATCCAGGACAAACTTGGCAATGAGTTCCTCCGCTCTAACGGTGGCATGGAGCCAGGCTTCGGTCCAGGCATGCTCATGTTCAGTCACCTGCCCCCTGTTACTAGCTTCACCCGGCTGGCCAGTCAAACTGTTATGGCTGACCTGCAGCCCCACGAGATGATCTTGAAGAAGGAGAGGGACTCGCCGGACTGTGGAGGAGGAGGGCTGGGTGCTGGAGGCATGGGTGGTGGAGGAGGCATAGGAGGGATGATGGGAAGCGTGGGCGATTACGTTCATGCAATGGGCATTAAACAGGAGAAGGTCTCTGAACATGATTACAGGCTGCCTCTCTACCCCGGAGGTGGAGCTGGAACTGGAGTACGAAGTGGAGGAGAGTTGCTGGAGGTCTCGCTGGGCAACCATCAGAACCTGGTGGTGCACGACCTCAGCCTGGGAAATCTGTCAGGGCGGCTGGTAAAGGAATCCTCAGGGAGGAAAGGTCGAAGGTCAAACGGCGAGGGACAGGAGGGCAAGACACGGAGGAAACGTGGAGAGTCGAAgTCAATGATGCTGGATCCAGATGGAGGGAGCTTGTCTCCAAACTCCAAACCGCACATCTGTGAGCACTGCAATGCAGCGTTCCGGAGCTCCTATCATTTACGCAGACATGTGCTTATACACACAGGTGAGAGGCCTTTCCGCTGCACTCAGTGTAACATGAGCTTCATTCAGAAATACCTCTTACAGAGACACGAGAAGATCCACAGTGGAGAGAAGCCATTCAGCTGTGACCAGTGCAACATGCGTTTTATTCAGAAGTACCACATGGAAAGACACAAAAGAACTCACAGCGGAGAAAAGCCATATAAGTGTGACACCTGCCAACAGTATTTTTCCAGAACGGACCGGTTGCTGAAGCACAAGCGGACGTGTGGAGATGCCATTAAAAAGGGTGTGGATGGAGCAGAACTCGAGTTGGGCTCAGCAGGAGAACACGGCAGCTACGGAATCTCTCAGGGAAATGCAGCTACGCCCAGCCGCAAACGGGGCAAGACAAAAAATGCTGGTGAGGGGGGTGAGCGGAAGCGTAAAAAGTCATCTGGGTCTATGGGAGCGACACACAGTCAGGGGGCTGATGGTTACGGGGTGCATGACTTTGGGGTATCAACAACATCATCTTCAGCCCAGCCGGGCCCCAGCATGCACGGAGAACACGGCCGGGCTCCCAAGATGGCCTTTAAGAAGGGCAACAGAAAGTCCCTGGAGAAGAATTCTCACCACATGGATCAGTCCAAGTCAGGAGGCATGGAGTTGCCTGCAGGAGGAGGCTTGGACAGCCTTGGGCTTCTTCCAGGTCCAGGGGCCAAAGTCGGTCCCAGCAGCAGTAACTACGATGATGCCATGCAGTTTCTGAAGAAGAGGCGGTACCTCCATGTGCCCAACAATGGGGGCGCTGCTTCTGGAGCCTCAGACTACGATGTAGGCGTCAGTCACATGCAGTCTCAGCCGACGGTTATCCAGGGTGTCGTTTCTGGAGTCTTAGATGGCGACGCTGCACTGGGCCTCCTGGACTCGTCCCCTCTGGGAGATATAAAGCAGGACAAGTCTGGCATCCCAGATGAGGTTCTCCAGAGCTTGTTGGACCACTATGCTCACAAGCCTGACGTGACCTTCGACATCACCGACTCCCATCACGTCGAGCTCCAGCCAGCCGCCACAGATGCTGCAGACCCACTGGGACCCGAGGACGCCCCGTCGAGTCCCAACAGTGGCGACAAATCCGTAATCATGCACGAGTACTCGCGTTTTCTCCTGCAGGCGCTAGAGAGGACCAGTCACAGTGCAAGCTTCCCGTTGGGTTCCAGTCCTGGTTCGGCCGTGACTACCACGGGACCATTTACAGGCCCTAGCCCACTTTTGTCAGACAAGCATGTGTATACTTCCTCACCTCTCGAGTACTCGTTCTCTCAGCCGGTCTCATCTTCGCCCTCCCTTTCGTCTGTGCCAAAGTCCCACTTTGGTCTCCTCGAGGGCTCGTCGCCTCCAACGGGCTTCCACTTGAGCAGCCTGGAGCCGTCTGCGCACACGCAGCAGCTCACACCTTCCCAGGAGCTCACCGAGCAGCTGGACAAGCAGCACACCTCCCCTCCGCCACCTCCACACACCCCCAACACCAACGCCTACCAGATCACACCTCAGCCTCCCGACCTGGGGGGTCCGAAGGAACCGCAAGGGCCGAAAAACGGAGCCGCAGCCACTACTGGAGGGTTTTCTCTGGCTGCATCCCAGGACCTGGCCACTCTAGACCCAGCCAAGGCTCCTTATCAGATTGAGAACTTTGCCCAGGCTTTCGGGGCTCAGTTTAAAGGGGGTCGAGTGTCCCTGGCCTTCAGCAGTGACTCGGGGGGAGAGGTGACTCACCGCTTACAGACATCAGTCTCCGAATTCTCAGGGTATAGCAGTCTCTTGGCTGATGCCAGCGACCCAGTCAGCAGTGGCTCCAAAACCCCAACAAGCCAAAGCTACAGGTGAATGGGCTCCTGTGCCTAGATGCTCAGATGGAGGttctctatttttattttgtcatgctgtctttattttgtattgtcgttattgttgttgttgttattattattgttattattaatattgttattattattatttagttctCCTACTTCAATgaaattttcatgttttcaagtAATGTTTTTCTCACTGCCATTATGTTCGTATGAAATTTCACCCTCCTTTGGCCTGCGATGCATTTTCCATTATTACTTTCTCCGTAGACTTTTAGTTCTGCTCTGCTCATCAATAGACGAAAACGCAAGCAAAATTAGTTCAGCttacttttttccccaaaagTCATTCAAAGACACTTTAGCAATTGACTTCACAAGcgtgtaaaaataattatgaaaaagcaATGGCAGGGAGTTGCCCAGAACTGAAATCGTCTGTTACAATGATTCAAGTATTACTCAGGAAAACGTGTGGACGGCAAATCCAGAAGGGTAGCAAGCATTCATCCAAGAGGCAGACATTTTTGCAAATACAAAGAGCTTTTTCAAGAGAgagtttttggcttttttttttccttttgaaaaaGTGCAACAAGTAGAAGACAAAAGCGCTGCCTGTTAAATTACACTGACACCACTTTCCACTTAGCTGTATAGAGATTATGGTACTTTTATGTCAATGTGAAAAGCTCACATTCTCTTTCAGTAAgggccatatatatatatatataaatatatatttataagaatctgtatgtaaaataacatataCTCTTTCTTGAGACTGGCAGGTGACCTGGAGGGAGATAAAGAGGGATTGAGTTTGTGAAGGGAGGCCTGTGACTGACTGCACATAAACCCCCTTTGCCCtgtccttctttttttcccttggaTTGCGAAGCCAAGGGCTATACACTAGAGGGCGCTGCATGCGAGCGTGTAAGTGCCTCTCGGCACAGGCCAGATCGTGGGATTCTTCTGCGCCTGTCTGGCTTGCTCATCCCTCTTTCCCTCCGTCCACTCCTCCTTTCCCTTCTTCATCAAAAAGAATCCCATTTAGCACTTTTTGGTTCCTGTTTATTTTACACGGTGAATGAAACTACCCAGGCTGATCACACAGAATGTGAACTGTGTAACtgacatgctgttttttttaaaagggggCAGTGGACAGAAAAGGGGCGGGATTAATTTTAGAAAGCGTAGATTATGTTGAAAAGACCAACGATGAGGTCTTATGAAAAATGTTAGTTTCAACGGGGACGTGTTTGCTGGAATTAAGGGTGGGCTTTTTCTTGGGGTGGGAGCGCGGggtgtctttttttctattttattcccAGCTTCTCATGGACGTAGGGCAGGTTAAAGAGGGGgacttttcttctcctttttgttatatttcaaaGGTATTGGGTTGGGAAAATGTGCTTTGTGTTAAAATGGCCCCTGTTGTACCAAGCTTTTCACCAGAGGCGACTTGTAAAAAGTCCCGCTCTTAGTAATTTATATAGTATTGGTCCTAAATATACCGACTGAACAGTCCAAAAGGAATTCAGAAACCTTATCACAGTGTGCATGCAGGGCAAAGTATTACCTtgaactacatttttttatatgtttgatTTTGTACTGTACaagtattattgtatttttttttttaaaacgatcAATAACTGTCTTCCATCAGCACTGTTGGCTGCTGTTACACTGTCCTTGAATTACTGTCATCTAATGTTGTTCCTTCTTTCATGTGTTTTACCTACCGATCCCCCCAAAGGACAGAACCACATGCAAGATTGTTTGACAGGCGGACGGCTCTTAGGGAACACAAACTGACCACTAGGACTCATTTAGGAAGTTCGGGGTACTCCGTTCACAATAATGGTAGTAATAATAATCGCATTGATGAGGATTGTGATGACTAAAATGAAATCGTCACAGCTGATGTTTTTATACCTCATATCACTGGTCACACAAGCAGGGATATCAAAGAGTGACTGTATGTAGCATGACTGATGTGGCTACCGTCAAGAAACGCCTCAAATAGTCCCTTTGCCattaaaattgtcttttttttattgtaggaTTTCCTGTTTTTCAGAGACAATTTTCTGAAAGGTTCTTGAAGTCGGTCACTTTAGTATTGTTTCAATAACTAAGGTCGAGGAGATCCAAAGATGCTATGAATTGAAATCTAATTTTACTTAGATGCACACAGGCTGTCAATTccctttgcatttatttttttttgttttaaattcatccTGTGCCCTGCAGTTTTGACctgtaatttgttttatgatttgatGTGAAGCAcagctgaaatataatttctggTTCAATGTGTAAAGCCCCCGCAGACACTGTTAAGCCTTGAATGATATCCTGTGTGGCTTGAATAATGCCAGCCATCAATCTGTCAGTGGTTGCCAccataaggttttttttgtcatcttgcTGTATATTCccttaaagtatttattttgtttacatagttaataacactacatttttttttttttttgcatgtacatttttgatgttttctttttgcccCCTTTTTTTCACCATGCCAAATTTGTAGCTAATGATCTTTTTCTCTCCtgtcttattttattacagattcTTGTGATCTGATACACAGGGCTATACCTGTccattttgactttattattgattaggaaaaacaataaaaatgctgaGATAAG

Function

symbol description
znf281a Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in nucleus. Orthologous to human ZNF281 (zinc finger protein 281).

NR:

description
PREDICTED: zinc finger protein 281-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235008.1 True 5468 mRNA 0.47 7 15014945 15026960

Neighbor

gene id symbol gene type direction distance location
si:ch211-198m17.1 LOC107581740,LOC107654530,LOC107737902,LOC107674687,LOC107720027 coding downstream 5830 14992043 ~ 15009115 (-)
mpp3a mpp3a,mpp3,LOC107654527,LOC107737916,LOC107720025,LOC107674727,LOC107591370 coding downstream 27805 14967925 ~ 14987140 (-)
baxa baxa,LOC107601305,LOC107721480,LOC107674732,LOC107720019 coding downstream 350112 14657730 ~ 14664833 (-)
gpatch8 LOC107721478,LOC107654521,LOC107674594,LOC107601302,LOC107720016 coding downstream 373817 14610261 ~ 14641128 (-)
arf2a arf2a,arf2b,LOC103045652,LOC108427419,LOC105013206,LOC107554546 coding downstream 433182 14573762 ~ 14581763 (-)
svilc LOC107581739,LOC107654532,LOC107591458,LOC107674723 coding upstream 70959 15097919 ~ 15121776 (-)
cdk21 cdk21,LOC107581773,LOC107591488,LOC107674697,LOC107720098,LOC107738149,LOC107654471 coding upstream 95586 15122546 ~ 15126368 (-)
retsat.2 retsat,zgc:154169,LOC107737865,LOC107720034,LOC107674695 coding upstream 99541 15126501 ~ 15130587 (-)
LOC122341944 retsat,zgc:154169,LOC107737865,LOC107720034,LOC107674695 coding upstream 104455 15131415 ~ 15137894 (-)
LOC122341946 LOC107720104,LOC107592690,LOC107674628 coding upstream 111260 15138220 ~ 15141021 (-)
G20253 NA non-coding downstream 24954 14988277 ~ 14989991 (-)
G20248 NA non-coding downstream 55658 14956739 ~ 14959287 (-)
G20245 asic2,LOC107674665,LOC107737939,LOC107590420,LOC107654528,LOC102794937 non-coding downstream 163083 14849717 ~ 14851862 (-)
G20233 asic2,LOC107720021,LOC107654528,LOC107601227,LOC107674665,LOC107720082,LOC107590422 non-coding downstream 327509 14632214 ~ 14687436 (-)
G20344 LOC107581796,LOC107738142,LOC107654462,LOC107591562,LOC107674600,LOC107720100 non-coding upstream 225135 15252095 ~ 15254617 (-)
G20338 aldoaa,LOC107581735,LOC107720037,LOC107674678,LOC102778271,LOC103381979 non-coding upstream 253387 15280347 ~ 15333486 (-)
G20352 epn2,LOC107674690,LOC107720043,LOC107654543 non-coding upstream 292750 15319710 ~ 15324611 (-)
G20363 NA non-coding upstream 339176 15366136 ~ 15366451 (-)
G20546 NA non-coding upstream 608112 15635072 ~ 15637612 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other downstream 575404 14435147 ~ 14439541 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other downstream 810595 14202930 ~ 14204350 (-)
G19933 NA other downstream 1208967 13805368 ~ 13805978 (-)
gng13b NA other downstream 1222343 13786009 ~ 13792602 (-)
G19700 NA other downstream 1967451 13047041 ~ 13047494 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other upstream 93846 15120806 ~ 15179359 (-)
LOC122341947 NA other upstream 114857 15141817 ~ 15145608 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other upstream 571810 15598770 ~ 15600348 (-)
G20680 LOC101886504,LOC101886427 other upstream 1424180 16451140 ~ 16451800 (-)
LOC122341847 NA other upstream 1426114 16453074 ~ 16455479 (-)

Expression


Co-expression Network