rarab (rara,rarab,LOC108434941,LOC108276117,LOC108261354,LOC107737746,LOC107695008,LOC107554136,LOC107582978,LOC107689638)


Basic Information

Item Value
gene id rarab
gene name rara,rarab,LOC108434941,LOC108276117,LOC108261354,LOC107737746,LOC107695008,LOC107554136,LOC107582978,LOC107689638
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12345435 ~ 12447724 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235116.1
ACGGCGGCGTAGGCTGGCCGGTGTTCGGTTTCACCAGCTCACACGTGACCGCAATGGCTGCTTGTCTGCTCCGTGCAGTGCATCATTCCTCCGCCGCCCAGCGAATGTAGACTACATCAATTTTCTCGCTTCGCTGAACTGTCGGTGCGGATATTTGCCTCCCGCAGAGGCGAAACTCCCCTCCGCGTTCCGCCGAACATCTCCACCGGCGGAGAGCCACCACATTCGGGAGAGAAATTACAGCGTCTCGGGCTTCAACTTCCACCAACCAACACCGCGGTAGGAGGAGTCAACAGgtgTTTCTCTCTGGTGTGGTGCCGTTCCTCTGGCTGTCTGCAGAGATTTAAGACAGAGAAATCCAGCAGCAGGTCACCGTGTTGGACTGACTCGCTCTGACAGCTTTGACCCGAGAGCAGTTTGTCACCTCCGGAGCACTGCTTCTCATTTCCTCTTGCGTCACATGGCCCTAGTCCATCCTCCTGAGATCAGGCCCTTGTGAAGAGCAACTGGAATATACTGCCtcaacacacttttattctcaGAGAACTTTGGGATTGACTCCAGAGAGTTACATAACATCACAACAAAGAGCGCAATACCTGTGAGCCATACACTGTGATCGAATGGCGTCATAACCCCTCACACGCACCCTGGATCACAATCATTAACCTGTTTCTGTCTCAAGCCACAGTAACAAGTGCCCGCACGGACAATCGCAGACAAAGCTCTCCTAGTTGGATTACCAAAAGTAGCTCATGATGGGACAGTAGACTTCTGGCATCACGGATAGCCTGCACAGAGGTCTGGGACTCAGTGCTTTATCTGAGCGTGCTATGTCTGGAAACGGCAACCCCTGCCCCAGCCCCGGAGGTCTGGGCAACCCTTTAGGGGGCTTCCCCATGCCACACTACCCTTACTTCTTTCCTCATATGCTAGGAGGTCTCTCCCCTCCGGCGCTTCCAGGACTTCCTGTCAGTGGATACAGCACTCCGTCTCCTGCAACTGTGGAGACGCAGAGCACAAGCTCAGAAGAGATTGTACCCAGCCCACCttctccacctcctccaccGCGGGTCTACAAGCCCTGTTTCGTCTGCCAGGACAAGTCCTCGGGCTACCATTATGGAGTTAGTGCATGTGAAGGGTGCAAGGGCTTTTTCCGAAGAAGCATTCAGAAGAACATGGTGTACACCTGCCACAGAGAGAAGAGCTGTATCATCAACAAGGTGACCCGAAACCGCTGCCAGTACTGTCGGCTGCAGAAGTGCCTGGAAGTGGGCATGTCTAAAGAATCTGTGCGGAATGACCGGAACAAGAGGAAGAAGGAAGAGAAGAAGCAGGAGTGTTCGGAGAGTTATGTCTTAAGTCCTGATACGGAGCAGATGATCGAGCGGGTAAGGAAGGCCCATCAGGACACCTTCCCCTCCCTGTGTCAGCTGGGCAAATACACCACGAACAACAGTGCAGACCACAGGGTCGCTCTGGACGTTGACCTGTGGGACAAGTTCAGTGAACTCTCCAccaaatgcatcattaaaacgGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCACCACGCTCACTATCGCAGATCAGATCACCCTGTTAAAGGCCGCCTGTCTCGACATCCTGATTCTGCGGATATGTACGCGCTACACACCGGATCAGGACACCATGACGTTTTCAGACGGTCTGACACTGAACCGCACGCAGATGCACAACGCTGGCTTCGGTCCACTGACGGATCTGGTTTTCGCTTTCGCCAACCAGCTCCTGCCTCTGGAGATGGACGATGCAGAGACGGGGCTGCTCAGCGCCATCTGTCTGCTGTGTGGAGATCGGCAGGATCTGGAGCAGTCGGATAAGGTAGACGTGCTTCAGGAGCCGCTGCTGGAGGCTCTCAAGATCTACGTGAGGAAGAGGAGGCCTCATAAACCACACATGTTCCCCAAAATGCTGATGAAGATCACAGACCTGAGGAGCATCAGCGCTAAAGgAGCCGAGCGAGTAATAACGCTGAAAATGGAGATCCCCGGCTCCATGCCTCCGCTCATTCAGGAGATGCTGGAGAATTCAGAGGGTCTGGAGGGTGGCGGCGGGGCGAgggggggaggaggaggaggaggaggaggaggaggagcaccACCAGGAAGCTGCAGCCCCAGTTTGTCTCCCAGTTCGGCACACAGCAGCCCCTCTGCTCACTCCCCCTGAGTGTCATCTCCAGACAGGGAGCGAAACGAAACTGGTTCCAAACCAGAAATAAGCCTCAGCCGACCAGCGCCAGAAACCAGATTTCCGGTAGACTTTGACCCGGGCTGACCGGACCCGAACACTTAATCTGGCCGGCTTTCATTAGCTGAAGACCAATCGAGTCATACACAGGTCGAGCCTGCTCAAAACTCACGCTGTCATTAAAACCATTCAGTGACTACCAGAGCCCTGCAGCTTTTCACGTGACGGTGGTCTCCGAAGACGGCAGAACAAACGTCCCGTGCGTGCAGAAGCGGCTCTATACCGCGTCTTCCCAGCTCTGCTCCCATCACACAAACTGTGAAGGCCCAGACAAGCTCTCCCTCTCGTCTGAGGGACGCTTTCTCTTGAGcctgtgacttttattttataaatttcaaTCCCTTAAAAGCAAGCTAAAGGACATTAGGACGTCAAATGTCCGCAAGTCAGGGACATTTTGAACTTTCCAGCTGTTTTGgttctgtttctttgttttcttacaaaaagatatatgaatatatgaaatctatattgacagaaaaatgaGATTTGAATTTTGTGTCTTAGGTGGAATGCAGAACAGTTCTtatcttttctctctcacttttcTCTCAAGAGTTAAACACGGTTATGGTCGACCCACTGTTCCGCTCACTCCCAGACAGTCCCGTTCACGTCACGCACAAGGGCACGTCACGCTAGCACTGAAAATCATGCGATGGGCTTGAAACGCAATTTCGTCCAGTGAGGAAGTGATTTGGAGACGTATTCAGAATGATCAACTTGGCAGATTGATGCAAAGAAATGAAGGATCTCATGTAAACAAGCAGGTTGTGATTCATGGTGATGTGTATGAGATCTCGGAGCGGGAAATGCCTTTGTGTagctttttaatattgtttcttAATTTGctcttcatttttgtatttgtcgGAGATCCCCCACACACAAAGTATtagcagattttaaaataaaaagaggttTCCAAACCTAATGTGTCAAAAAGAATACAAGACGTATTTTTAACGAGAAGCCCACAAGAAAAACATGTCACTTCAGGAGTATGGAGAATGTTGTAATTGagtatttaaaacagaatttcatgccttcctccttttttttttttttttttttgcctgcacCTCAGTTTGTGATTAGATCTGTTTCTAAtcatctggtgtgtgtgtgtgtgtgtgtgtgtgctgagatGCTTCCACCGCCGCATCCTTCTCCTCTGTAACCTTACAACATCACTGCCTCTGCTCTCCTGCAACAATCATTGAACAATTGTCAACAACAACACTGCCTCTGTGTGACAATCACTTTAAGTAAAGCTCACAAACAACTCTGCCTCTGTAACACACACTGATCCGCACCAGACAtgttttgcttagttttttgggTCAGAAATCATCAAACAAGTACTGATTTCACAATTACGGTTGCCTAGAAATGCTTTAAGGTAATAATACATTGTATCAACGTTTCTGATAATGTAGCATTctttttgtttgaaaggaaattgtcattatttactcattttcttCCAAACCATGTGAACTTTCtgttgtgcgtgtgtgtgttcagcaaaagaaagtcaatcaggtttggaataacatgattttttttttttttttttttttttgggagaactGTACCTTTAAGTCAAACATTAGCTCgattaaaatgaatactttcAGAAAGCTCCATACAATCCAGTTCTGGCGGATCACTGTCAGCATATCATTATTGCACCAGTTTACAACAGCTCTGCCTCTGCATCACGTCTGCTTGAACCCGTTCTCACGTGCAGTGGGCCGCAACGACTTTAACATGTTCCTTTTGAGGGTGAAGTGAGCCGTTTCACTGCAACTATGCACACGACATGCACAGAGCTCGAGTCTGTTCACTTCTATCTACCTGTTGTGAAAATCACAAGCCTCTTCCAGCCGCTCAGTACTGTCCGTTTCATTTGATTCTGCATTCGAAGTTTCACCGCTTTCGAGCCATACTGCATCACAGACCTCGACGGGCCTCTTCTCTCACTCAAAGGATGACGGAGATCTACACGACATACAGCACAAACCCTGTACTGCTTTAACGGTTGTTATACAGTCAAACGCACAAATGTTTCTGTTGTATCAGGTCCCTGGATGATAaagtaatgtttaataaagacttctgttttgtgtgtttctgat
>XM_043235117.1
agtttttgtGGTGGCATGTACTGATGGGTGAATGTTACCCGGTGACCTGCCTTTTTGCATTGAGTCGCTATTCTTTTGTATGTTGGCGAAATCTGCATATGAAGTATTGTGGATATAAGACTATAAGAAAACTTAAGGGTGTCACCCTCTCTTCAGgtgTTTCTCTCTGGTGTGGTGCCGTTCCTCTGGCTGTCTGCAGAGATTTAAGACAGAGAAATCCAGCAGCAGGTCACCGTGTTGGACTGACTCGCTCTGACAGCTTTGACCCGAGAGCAGTTTGTCACCTCCGGAGCACTGCTTCTCATTTCCTCTTGCGTCACATGGCCCTAGTCCATCCTCCTGAGATCAGGCCCTTGTGAAGAGCAACTGGAATATACTGCCtcaacacacttttattctcaGAGAACTTTGGGATTGACTCCAGAGAGTTACATAACATCACAACAAAGAGCGCAATACCTGTGAGCCATACACTGTGATCGAATGGCGTCATAACCCCTCACACGCACCCTGGATCACAATCATTAACCTGTTTCTGTCTCAAGCCACAGTAACAAGTGCCCGCACGGACAATCGCAGACAAAGCTCTCCTAGTTGGATTACCAAAAGTAGCTCATGATGGGACAGTAGACTTCTGGCATCACGGATAGCCTGCACAGAGGTCTGGGACTCAGTGCTTTATCTGAGCGTGCTATGTCTGGAAACGGCAACCCCTGCCCCAGCCCCGGAGGTCTGGGCAACCCTTTAGGGGGCTTCCCCATGCCACACTACCCTTACTTCTTTCCTCATATGCTAGGAGGTCTCTCCCCTCCGGCGCTTCCAGGACTTCCTGTCAGTGGATACAGCACTCCGTCTCCTGCAACTGTGGAGACGCAGAGCACAAGCTCAGAAGAGATTGTACCCAGCCCACCttctccacctcctccaccGCGGGTCTACAAGCCCTGTTTCGTCTGCCAGGACAAGTCCTCGGGCTACCATTATGGAGTTAGTGCATGTGAAGGGTGCAAGGGCTTTTTCCGAAGAAGCATTCAGAAGAACATGGTGTACACCTGCCACAGAGAGAAGAGCTGTATCATCAACAAGGTGACCCGAAACCGCTGCCAGTACTGTCGGCTGCAGAAGTGCCTGGAAGTGGGCATGTCTAAAGAATCTGTGCGGAATGACCGGAACAAGAGGAAGAAGGAAGAGAAGAAGCAGGAGTGTTCGGAGAGTTATGTCTTAAGTCCTGATACGGAGCAGATGATCGAGCGGGTAAGGAAGGCCCATCAGGACACCTTCCCCTCCCTGTGTCAGCTGGGCAAATACACCACGAACAACAGTGCAGACCACAGGGTCGCTCTGGACGTTGACCTGTGGGACAAGTTCAGTGAACTCTCCAccaaatgcatcattaaaacgGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCACCACGCTCACTATCGCAGATCAGATCACCCTGTTAAAGGCCGCCTGTCTCGACATCCTGATTCTGCGGATATGTACGCGCTACACACCGGATCAGGACACCATGACGTTTTCAGACGGTCTGACACTGAACCGCACGCAGATGCACAACGCTGGCTTCGGTCCACTGACGGATCTGGTTTTCGCTTTCGCCAACCAGCTCCTGCCTCTGGAGATGGACGATGCAGAGACGGGGCTGCTCAGCGCCATCTGTCTGCTGTGTGGAGATCGGCAGGATCTGGAGCAGTCGGATAAGGTAGACGTGCTTCAGGAGCCGCTGCTGGAGGCTCTCAAGATCTACGTGAGGAAGAGGAGGCCTCATAAACCACACATGTTCCCCAAAATGCTGATGAAGATCACAGACCTGAGGAGCATCAGCGCTAAAGgAGCCGAGCGAGTAATAACGCTGAAAATGGAGATCCCCGGCTCCATGCCTCCGCTCATTCAGGAGATGCTGGAGAATTCAGAGGGTCTGGAGGGTGGCGGCGGGGCGAgggggggaggaggaggaggaggaggaggaggaggagcaccACCAGGAAGCTGCAGCCCCAGTTTGTCTCCCAGTTCGGCACACAGCAGCCCCTCTGCTCACTCCCCCTGAGTGTCATCTCCAGACAGGGAGCGAAACGAAACTGGTTCCAAACCAGAAATAAGCCTCAGCCGACCAGCGCCAGAAACCAGATTTCCGGTAGACTTTGACCCGGGCTGACCGGACCCGAACACTTAATCTGGCCGGCTTTCATTAGCTGAAGACCAATCGAGTCATACACAGGTCGAGCCTGCTCAAAACTCACGCTGTCATTAAAACCATTCAGTGACTACCAGAGCCCTGCAGCTTTTCACGTGACGGTGGTCTCCGAAGACGGCAGAACAAACGTCCCGTGCGTGCAGAAGCGGCTCTATACCGCGTCTTCCCAGCTCTGCTCCCATCACACAAACTGTGAAGGCCCAGACAAGCTCTCCCTCTCGTCTGAGGGACGCTTTCTCTTGAGcctgtgacttttattttataaatttcaaTCCCTTAAAAGCAAGCTAAAGGACATTAGGACGTCAAATGTCCGCAAGTCAGGGACATTTTGAACTTTCCAGCTGTTTTGgttctgtttctttgttttcttacaaaaagatatatgaatatatgaaatctatattgacagaaaaatgaGATTTGAATTTTGTGTCTTAGGTGGAATGCAGAACAGTTCTtatcttttctctctcacttttcTCTCAAGAGTTAAACACGGTTATGGTCGACCCACTGTTCCGCTCACTCCCAGACAGTCCCGTTCACGTCACGCACAAGGGCACGTCACGCTAGCACTGAAAATCATGCGATGGGCTTGAAACGCAATTTCGTCCAGTGAGGAAGTGATTTGGAGACGTATTCAGAATGATCAACTTGGCAGATTGATGCAAAGAAATGAAGGATCTCATGTAAACAAGCAGGTTGTGATTCATGGTGATGTGTATGAGATCTCGGAGCGGGAAATGCCTTTGTGTagctttttaatattgtttcttAATTTGctcttcatttttgtatttgtcgGAGATCCCCCACACACAAAGTATtagcagattttaaaataaaaagaggttTCCAAACCTAATGTGTCAAAAAGAATACAAGACGTATTTTTAACGAGAAGCCCACAAGAAAAACATGTCACTTCAGGAGTATGGAGAATGTTGTAATTGagtatttaaaacagaatttcatgccttcctccttttttttttttttttttttgcctgcacCTCAGTTTGTGATTAGATCTGTTTCTAAtcatctggtgtgtgtgtgtgtgtgtgtgtgtgctgagatGCTTCCACCGCCGCATCCTTCTCCTCTGTAACCTTACAACATCACTGCCTCTGCTCTCCTGCAACAATCATTGAACAATTGTCAACAACAACACTGCCTCTGTGTGACAATCACTTTAAGTAAAGCTCACAAACAACTCTGCCTCTGTAACACACACTGATCCGCACCAGACAtgttttgcttagttttttgggTCAGAAATCATCAAACAAGTACTGATTTCACAATTACGGTTGCCTAGAAATGCTTTAAGGTAATAATACATTGTATCAACGTTTCTGATAATGTAGCATTctttttgtttgaaaggaaattgtcattatttactcattttcttCCAAACCATGTGAACTTTCtgttgtgcgtgtgtgtgttcagcaaaagaaagtcaatcaggtttggaataacatgattttttttttttttttttttttttgggagaactGTACCTTTAAGTCAAACATTAGCTCgattaaaatgaatactttcAGAAAGCTCCATACAATCCAGTTCTGGCGGATCACTGTCAGCATATCATTATTGCACCAGTTTACAACAGCTCTGCCTCTGCATCACGTCTGCTTGAACCCGTTCTCACGTGCAGTGGGCCGCAACGACTTTAACATGTTCCTTTTGAGGGTGAAGTGAGCCGTTTCACTGCAACTATGCACACGACATGCACAGAGCTCGAGTCTGTTCACTTCTATCTACCTGTTGTGAAAATCACAAGCCTCTTCCAGCCGCTCAGTACTGTCCGTTTCATTTGATTCTGCATTCGAAGTTTCACCGCTTTCGAGCCATACTGCATCACAGACCTCGACGGGCCTCTTCTCTCACTCAAAGGATGACGGAGATCTACACGACATACAGCACAAACCCTGTACTGCTTTAACGGTTGTTATACAGTCAAACGCACAAATGTTTCTGTTGTATCAGGTCCCTGGATGATAaagtaatgtttaataaagacttctgttttgtgtgtttctgat
>XM_043235118.1
AGGATTGCGGTGTGGGATAGCCTGGAAAGTGCGTGGAGACCAGAGTTACCCTGTCGAGGAGCGCTTTGGTTTTTCAGGGAGAAATTTCCCACAAGTATGCGAGGGCTTCGACACAGGGCGCAAAAAGCATTACTTTGAGCTCGCGTCTGGAAACACCGGAGCAAGTTCGTCCCGCGTCTGATCGGCATCCTCCAGCGGGATTATTCACAACACCAAAccctctgtctatctctctcatCGATGCAAACGACCGGTTGTTTACAGTAAACACGCGCAAATGCGTCGACCCGTTAACGAGTAGCGTTTAGAAGACGTTTCGTTTGAGGCAAGGGGGAGGTTTTCGAGATAATCGGCGCTAACAGTTTTCGGAGGTTTCCGCGGACCGAGCGCGGGACTCTGCTGCTTCTAGTTACTCATGTAGCAGTTTCACATCGATCCCCGGGTCTCTTATAGAGCCACAGTTTCAACAGCACGCTGTGTTGCAACAACTGGCGCAGgattttaacatctgaagaatgTAGTTCATTCCCCGTGGACAGCTCGAGCTTCTGCTGAACTGATTTATACAACAAACGCGCCGAAAAGATCGAGCGTGAAATCGCACTTTCTGCTcgcgttttattgttttgatcggggtgtctttttaattttaacccgcTTGGTGTCTTTTGGTGCGACGGACAAGACGGAAGCATTTACTTTTGGAggttgtttgcttttatttcacgATGTACGAGAGTGTGGACGTTGTTGGGCTGACCCCTAGTCCGAACCCGTTTTTAAGCATGGATTACTACCACCAGAGCCGCGGCTGTCTGATCCCGGAGAAAGGCCTCGTGTCGGGAGCGGCCCGCGGTTTCAGGACCCCGCACTGGAGCGGCTCCAATCACTCTGTGGAGACGCAGAGCACAAGCTCAGAAGAGATTGTACCCAGCCCACCttctccacctcctccaccGCGGGTCTACAAGCCCTGTTTCGTCTGCCAGGACAAGTCCTCGGGCTACCATTATGGAGTTAGTGCATGTGAAGGGTGCAAGGGCTTTTTCCGAAGAAGCATTCAGAAGAACATGGTGTACACCTGCCACAGAGAGAAGAGCTGTATCATCAACAAGGTGACCCGAAACCGCTGCCAGTACTGTCGGCTGCAGAAGTGCCTGGAAGTGGGCATGTCTAAAGAATCTGTGCGGAATGACCGGAACAAGAGGAAGAAGGAAGAGAAGAAGCAGGAGTGTTCGGAGAGTTATGTCTTAAGTCCTGATACGGAGCAGATGATCGAGCGGGTAAGGAAGGCCCATCAGGACACCTTCCCCTCCCTGTGTCAGCTGGGCAAATACACCACGAACAACAGTGCAGACCACAGGGTCGCTCTGGACGTTGACCTGTGGGACAAGTTCAGTGAACTCTCCAccaaatgcatcattaaaacgGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCACCACGCTCACTATCGCAGATCAGATCACCCTGTTAAAGGCCGCCTGTCTCGACATCCTGATTCTGCGGATATGTACGCGCTACACACCGGATCAGGACACCATGACGTTTTCAGACGGTCTGACACTGAACCGCACGCAGATGCACAACGCTGGCTTCGGTCCACTGACGGATCTGGTTTTCGCTTTCGCCAACCAGCTCCTGCCTCTGGAGATGGACGATGCAGAGACGGGGCTGCTCAGCGCCATCTGTCTGCTGTGTGGAGATCGGCAGGATCTGGAGCAGTCGGATAAGGTAGACGTGCTTCAGGAGCCGCTGCTGGAGGCTCTCAAGATCTACGTGAGGAAGAGGAGGCCTCATAAACCACACATGTTCCCCAAAATGCTGATGAAGATCACAGACCTGAGGAGCATCAGCGCTAAAGgAGCCGAGCGAGTAATAACGCTGAAAATGGAGATCCCCGGCTCCATGCCTCCGCTCATTCAGGAGATGCTGGAGAATTCAGAGGGTCTGGAGGGTGGCGGCGGGGCGAgggggggaggaggaggaggaggaggaggaggaggagcaccACCAGGAAGCTGCAGCCCCAGTTTGTCTCCCAGTTCGGCACACAGCAGCCCCTCTGCTCACTCCCCCTGAGTGTCATCTCCAGACAGGGAGCGAAACGAAACTGGTTCCAAACCAGAAATAAGCCTCAGCCGACCAGCGCCAGAAACCAGATTTCCGGTAGACTTTGACCCGGGCTGACCGGACCCGAACACTTAATCTGGCCGGCTTTCATTAGCTGAAGACCAATCGAGTCATACACAGGTCGAGCCTGCTCAAAACTCACGCTGTCATTAAAACCATTCAGTGACTACCAGAGCCCTGCAGCTTTTCACGTGACGGTGGTCTCCGAAGACGGCAGAACAAACGTCCCGTGCGTGCAGAAGCGGCTCTATACCGCGTCTTCCCAGCTCTGCTCCCATCACACAAACTGTGAAGGCCCAGACAAGCTCTCCCTCTCGTCTGAGGGACGCTTTCTCTTGAGcctgtgacttttattttataaatttcaaTCCCTTAAAAGCAAGCTAAAGGACATTAGGACGTCAAATGTCCGCAAGTCAGGGACATTTTGAACTTTCCAGCTGTTTTGgttctgtttctttgttttcttacaaaaagatatatgaatatatgaaatctatattgacagaaaaatgaGATTTGAATTTTGTGTCTTAGGTGGAATGCAGAACAGTTCTtatcttttctctctcacttttcTCTCAAGAGTTAAACACGGTTATGGTCGACCCACTGTTCCGCTCACTCCCAGACAGTCCCGTTCACGTCACGCACAAGGGCACGTCACGCTAGCACTGAAAATCATGCGATGGGCTTGAAACGCAATTTCGTCCAGTGAGGAAGTGATTTGGAGACGTATTCAGAATGATCAACTTGGCAGATTGATGCAAAGAAATGAAGGATCTCATGTAAACAAGCAGGTTGTGATTCATGGTGATGTGTATGAGATCTCGGAGCGGGAAATGCCTTTGTGTagctttttaatattgtttcttAATTTGctcttcatttttgtatttgtcgGAGATCCCCCACACACAAAGTATtagcagattttaaaataaaaagaggttTCCAAACCTAATGTGTCAAAAAGAATACAAGACGTATTTTTAACGAGAAGCCCACAAGAAAAACATGTCACTTCAGGAGTATGGAGAATGTTGTAATTGagtatttaaaacagaatttcatgccttcctccttttttttttttttttttttgcctgcacCTCAGTTTGTGATTAGATCTGTTTCTAAtcatctggtgtgtgtgtgtgtgtgtgtgtgtgctgagatGCTTCCACCGCCGCATCCTTCTCCTCTGTAACCTTACAACATCACTGCCTCTGCTCTCCTGCAACAATCATTGAACAATTGTCAACAACAACACTGCCTCTGTGTGACAATCACTTTAAGTAAAGCTCACAAACAACTCTGCCTCTGTAACACACACTGATCCGCACCAGACAtgttttgcttagttttttgggTCAGAAATCATCAAACAAGTACTGATTTCACAATTACGGTTGCCTAGAAATGCTTTAAGGTAATAATACATTGTATCAACGTTTCTGATAATGTAGCATTctttttgtttgaaaggaaattgtcattatttactcattttcttCCAAACCATGTGAACTTTCtgttgtgcgtgtgtgtgttcagcaaaagaaagtcaatcaggtttggaataacatgattttttttttttttttttttttttgggagaactGTACCTTTAAGTCAAACATTAGCTCgattaaaatgaatactttcAGAAAGCTCCATACAATCCAGTTCTGGCGGATCACTGTCAGCATATCATTATTGCACCAGTTTACAACAGCTCTGCCTCTGCATCACGTCTGCTTGAACCCGTTCTCACGTGCAGTGGGCCGCAACGACTTTAACATGTTCCTTTTGAGGGTGAAGTGAGCCGTTTCACTGCAACTATGCACACGACATGCACAGAGCTCGAGTCTGTTCACTTCTATCTACCTGTTGTGAAAATCACAAGCCTCTTCCAGCCGCTCAGTACTGTCCGTTTCATTTGATTCTGCATTCGAAGTTTCACCGCTTTCGAGCCATACTGCATCACAGACCTCGACGGGCCTCTTCTCTCACTCAAAGGATGACGGAGATCTACACGACATACAGCACAAACCCTGTACTGCTTTAACGGTTGTTATACAGTCAAACGCACAAATGTTTCTGTTGTATCAGGTCCCTGGATGATAaagtaatgtttaataaagacttctgttttgtgtgtttctgat
>XM_043235119.1
CACAAGCTCAGAAGAGATTGTACCCAGCCCACCttctccacctcctccaccGCGGGTCTACAAGCCCTGTTTCGTCTGCCAGGACAAGTCCTCGGGCTACCATTATGGAGTTAGTGCATGTGAAGGGTGCAAGGCCACTGCTGCAGCCCCTAATCCGATGGAATTACCCAGCTGCCCCTCTGTTGCCAGAGCATTCTTCACACCTTGTGATGATATTGAGCTTCATTCCTGTGGCTTTCAGGCCCGACCAACAGCGGCACAGCGCAGAGCGAATGAAGCAGGACGAGGAAAAGGGGCCTTTTGATTGTGCGCTGGTGTGACTTTTGTCATGGGTTTGTTATCAATGATTCAGCTCTCCAGGTGAGACGGATCTCGGCTGTACAAAGGGTGCCTTCGCTCAGGATCCATGGGATATTTGGCTACCGACGTAAATGCGTTTTGTGAGGCAATGTAGAgctaatgctttattttcagctgaattgtgctacatttttttaggtAGGATCTGCAAAGTTGGtttaaatgtattgcttttattatCCAAGTGTTCGAGTTTTGAAACGGAGCAAGCGAAATTGCTGCCCACTGAAAAAGGAAATGTGCAAGAAGCAGCTTGCAACTTCACGTAGCGCGTCTACAGCAGTGACTGACCCGCTGATACTGGTCCAGAAAGAAGCGTTTCATCTGCATCTACCACAATGACCTCCAACGATGACCTCCAGAAGATCACAGCTggcatgaataaaacatgcccGATGAATGAGAGCTCCTCTGTAGGGAGATCAGGCCTTTGGGCAGCGCATTAGAAAACCATTTCGGCTCGGCTCGGCGAGCACACGTTCTGTCACACATCTGCCATGCTCACCTTTTCctttattactttttcataGCAGAGACCGAGTGTGAGAGGGACATGTCCTTGCAGCATGCGAGACATGTCCTTGGACACACGCTTTGGCTGAAATGACATGAGTGTTTTTAGATGGCAGCCGCTGGACAGACCTgtcaaaagcacacacatactAAAAGCTTCCCCTGGGTGGCCTGGCTGATATGCTGAAGGCTTTTCCACTAAAAGCCTTCGGGATAATTGTTTCTAAACCAGAGAGGGacgatgttgttgttgttgttgttttgtttttttactgtaggcTCGCTTTGAAAACGGTAGCATGACTGGGATGCTTATTTAGATGCCGTTCATTTGTAGGTGGCGTAACACCAATCACAGCAGATTCGCTTATCAGGCTTTTTCCGAAGAAGCATTCAGAAGAACATGGTGTACACCTGCCACAGAGAGAAGAGCTGTATCATCAACAAGGTGACCCGAAACCGCTGCCAGTACTGTCGGCTGCAGAAGTGCCTGGAAGTGGGCATGTCTAAAGAATCTGTGCGGAATGACCGGAACAAGAGGAAGAAGGAAGAGAAGAAGCAGGAGTGTTCGGAGAGTTATGTCTTAAGTCCTGATACGGAGCAGATGATCGAGCGGGTAAGGAAGGCCCATCAGGACACCTTCCCCTCCCTGTGTCAGCTGGGCAAATACACCACGAACAACAGTGCAGACCACAGGGTCGCTCTGGACGTTGACCTGTGGGACAAGTTCAGTGAACTCTCCAccaaatgcatcattaaaacgGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCACCACGCTCACTATCGCAGATCAGATCACCCTGTTAAAGGCCGCCTGTCTCGACATCCTGATTCTGCGGATATGTACGCGCTACACACCGGATCAGGACACCATGACGTTTTCAGACGGTCTGACACTGAACCGCACGCAGATGCACAACGCTGGCTTCGGTCCACTGACGGATCTGGTTTTCGCTTTCGCCAACCAGCTCCTGCCTCTGGAGATGGACGATGCAGAGACGGGGCTGCTCAGCGCCATCTGTCTGCTGTGTGGAGATCGGCAGGATCTGGAGCAGTCGGATAAGGTAGACGTGCTTCAGGAGCCGCTGCTGGAGGCTCTCAAGATCTACGTGAGGAAGAGGAGGCCTCATAAACCACACATGTTCCCCAAAATGCTGATGAAGATCACAGACCTGAGGAGCATCAGCGCTAAAGgAGCCGAGCGAGTAATAACGCTGAAAATGGAGATCCCCGGCTCCATGCCTCCGCTCATTCAGGAGATGCTGGAGAATTCAGAGGGTCTGGAGGGTGGCGGCGGGGCGAgggggggaggaggaggaggaggaggaggaggaggagcaccACCAGGAAGCTGCAGCCCCAGTTTGTCTCCCAGTTCGGCACACAGCAGCCCCTCTGCTCACTCCCCCTGAGTGTCATCTCCAGACAGGGAGCGAAACGAAACTGGTTCCAAACCAGAAATAAGCCTCAGCCGACCAGCGCCAGAAACCAGATTTCCGGTAGACTTTGACCCGGGCTGACCGGACCCGAACACTTAATCTGGCCGGCTTTCATTAGCTGAAGACCAATCGAGTCATACACAGGTCGAGCCTGCTCAAAACTCACGCTGTCATTAAAACCATTCAGTGACTACCAGAGCCCTGCAGCTTTTCACGTGACGGTGGTCTCCGAAGACGGCAGAACAAACGTCCCGTGCGTGCAGAAGCGGCTCTATACCGCGTCTTCCCAGCTCTGCTCCCATCACACAAACTGTGAAGGCCCAGACAAGCTCTCCCTCTCGTCTGAGGGACGCTTTCTCTTGAGcctgtgacttttattttataaatttcaaTCCCTTAAAAGCAAGCTAAAGGACATTAGGACGTCAAATGTCCGCAAGTCAGGGACATTTTGAACTTTCCAGCTGTTTTGgttctgtttctttgttttcttacaaaaagatatatgaatatatgaaatctatattgacagaaaaatgaGATTTGAATTTTGTGTCTTAGGTGGAATGCAGAACAGTTCTtatcttttctctctcacttttcTCTCAAGAGTTAAACACGGTTATGGTCGACCCACTGTTCCGCTCACTCCCAGACAGTCCCGTTCACGTCACGCACAAGGGCACGTCACGCTAGCACTGAAAATCATGCGATGGGCTTGAAACGCAATTTCGTCCAGTGAGGAAGTGATTTGGAGACGTATTCAGAATGATCAACTTGGCAGATTGATGCAAAGAAATGAAGGATCTCATGTAAACAAGCAGGTTGTGATTCATGGTGATGTGTATGAGATCTCGGAGCGGGAAATGCCTTTGTGTagctttttaatattgtttcttAATTTGctcttcatttttgtatttgtcgGAGATCCCCCACACACAAAGTATtagcagattttaaaataaaaagaggttTCCAAACCTAATGTGTCAAAAAGAATACAAGACGTATTTTTAACGAGAAGCCCACAAGAAAAACATGTCACTTCAGGAGTATGGAGAATGTTGTAATTGagtatttaaaacagaatttcatgccttcctccttttttttttttttttttttgcctgcacCTCAGTTTGTGATTAGATCTGTTTCTAAtcatctggtgtgtgtgtgtgtgtgtgtgtgtgctgagatGCTTCCACCGCCGCATCCTTCTCCTCTGTAACCTTACAACATCACTGCCTCTGCTCTCCTGCAACAATCATTGAACAATTGTCAACAACAACACTGCCTCTGTGTGACAATCACTTTAAGTAAAGCTCACAAACAACTCTGCCTCTGTAACACACACTGATCCGCACCAGACAtgttttgcttagttttttgggTCAGAAATCATCAAACAAGTACTGATTTCACAATTACGGTTGCCTAGAAATGCTTTAAGGTAATAATACATTGTATCAACGTTTCTGATAATGTAGCATTctttttgtttgaaaggaaattgtcattatttactcattttcttCCAAACCATGTGAACTTTCtgttgtgcgtgtgtgtgttcagcaaaagaaagtcaatcaggtttggaataacatgattttttttttttttttttttttttgggagaactGTACCTTTAAGTCAAACATTAGCTCgattaaaatgaatactttcAGAAAGCTCCATACAATCCAGTTCTGGCGGATCACTGTCAGCATATCATTATTGCACCAGTTTACAACAGCTCTGCCTCTGCATCACGTCTGCTTGAACCCGTTCTCACGTGCAGTGGGCCGCAACGACTTTAACATGTTCCTTTTGAGGGTGAAGTGAGCCGTTTCACTGCAACTATGCACACGACATGCACAGAGCTCGAGTCTGTTCACTTCTATCTACCTGTTGTGAAAATCACAAGCCTCTTCCAGCCGCTCAGTACTGTCCGTTTCATTTGATTCTGCATTCGAAGTTTCACCGCTTTCGAGCCATACTGCATCACAGACCTCGACGGGCCTCTTCTCTCACTCAAAGGATGACGGAGATCTACACGACATACAGCACAAACCCTGTACTGCTTTAACGGTTGTTATACAGTCAAACGCACAAATGTTTCTGTTGTATCAGGTCCCTGGATGATAaagtaatgtttaataaagacttctgttttgtgtgtttctgat

Function

symbol description
rarab Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II and pectoral fin development. Acts upstream of or within liver development; midbrain-hindbrain boundary development; and secondary heart field specification. Predicted to be located in nucleus. Is expressed in several structures, including endoderm; hindbrain neural keel; mesoderm; nervous system; and neural plate. Human ortholog(s) of this gene implicated in acute promyelocytic leukemia; lung carcinoma (multiple); and syndromic microphthalmia 12. Orthologous to several human genes including RARA (retinoic acid receptor alpha).
rara Enables several functions, including DNA binding activity; nuclear receptor activity; and protein kinase B binding activity. Involved in several processes, including cellular response to estrogen stimulus; regulation of gene expression; and regulation of leukocyte differentiation. Located in several cellular components, including actin cytoskeleton; chromatin; and nuclear lumen. Part of protein-containing complex. Implicated in acute promyelocytic leukemia. Biomarker of mood disorder.

NR:

description
PREDICTED: retinoic acid receptor alpha isoform X3

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0043401 steroid hormone mediated signaling pathway biological_process
GO:0001889 liver development biological_process
GO:0048384 retinoic acid receptor signaling pathway biological_process
GO:0033339 pectoral fin development biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003707 steroid hormone receptor activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235116.1 False 4435 mRNA 0.49 10 12345435 12438498
XM_043235117.1 False 4295 mRNA 0.48 10 12345435 12447724
XM_043235118.1 False 4324 mRNA 0.48 8 12345435 12373181
XM_043235119.1 True 4530 mRNA 0.47 8 12345435 12357369

Neighbor

gene id symbol gene type direction distance location
LOC122342092 LOC107758479 coding downstream 12594 12322244 ~ 12332841 (-)
LOC122336412 LOC107658520,LOC107554095,LOC107582983,LOC107729569,LOC107689640,LOC107737779 coding downstream 25369 12315450 ~ 12320066 (-)
aoc2 aoc2,LOC107658518,LOC107729559,LOC107582984,LOC107689706 coding downstream 44862 12297054 ~ 12300573 (-)
g6pc1b g6pcb,LOC107582985,LOC107729528,LOC107658515,LOC107554093 coding downstream 54451 12288422 ~ 12290984 (-)
kat7a LOC107689642,LOC107554133,LOC107737751,LOC107729527,LOC107582986,LOC107658517,LOC108437993 coding downstream 57559 12279708 ~ 12287876 (-)
si:dkey-283b1.6 NA coding upstream 45994 12493718 ~ 12498011 (-)
abi3a LOC107758490,LOC107583075,LOC107695026 coding upstream 51050 12498774 ~ 12508792 (-)
LOC122342135 LOC107695140,LOC107758481,LOC107583074 coding upstream 61467 12509191 ~ 12510507 (-)
ccdc103 LOC107758482,LOC107583073,LOC107695153 coding upstream 62885 12510609 ~ 12512465 (-)
rpl23 rpl23,RPL23,rl23 coding upstream 64879 12512603 ~ 12514795 (-)
LOC122332655 NA non-coding downstream 50012 12294140 ~ 12295423 (-)
LOC122341243 LOC107729463,LOC107658509,LOC107582987 non-coding downstream 74499 12265845 ~ 12270936 (-)
G19518 LOC107729456,LOC107658501,LOC107582995,LOC107554123,LOC107689649,LOC107737759 non-coding downstream 115056 12226575 ~ 12230379 (-)
G19503 NA non-coding downstream 162951 12182258 ~ 12182484 (-)
G19463 NA non-coding downstream 248073 12092899 ~ 12097362 (-)
G19677 LOC107737766 non-coding upstream 416586 12864310 ~ 12886954 (-)
G19672 alkbh7,LOC107723204,LOC107690706 non-coding upstream 453057 12900781 ~ 12902910 (-)
LOC122332187 NA non-coding upstream 624836 13072560 ~ 13072828 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding upstream 632346 13080070 ~ 13080621 (-)
G19703 ighv6-1 non-coding upstream 642947 13090671 ~ 13091152 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other downstream 1563 12339187 ~ 12343872 (-)
LOC122341756 NA other downstream 424668 11909775 ~ 11920767 (-)
G19383 NA other downstream 464476 11853748 ~ 11880959 (-)
limd2 limd2,LOC107674139,LOC107658411,LOC107721965 other downstream 617434 11712820 ~ 11728001 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other downstream 630716 11694272 ~ 11714719 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other upstream 175059 12622783 ~ 12679800 (-)
cacna1aa LOC107690704,LOC107571502 other upstream 234266 12681990 ~ 12763090 (-)
G19676 LOC107690708 other upstream 558272 13005996 ~ 13068190 (-)
G19700 NA other upstream 599317 13047041 ~ 13047494 (-)
gng13b NA other upstream 1338285 13786009 ~ 13792602 (-)

Expression


Co-expression Network