grapa (grapa,LOC107654542,LOC107720042,LOC107581733,LOC107737776,LOC107592716,LOC107674739,LOC108430571)


Basic Information

Item Value
gene id grapa
gene name grapa,LOC107654542,LOC107720042,LOC107581733,LOC107737776,LOC107592716,LOC107674739,LOC108430571
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 15309745 ~ 15316561 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235652.1
CTGCCACCCCTGCCTCCCTCCcacaagctctctctctctttctctctctctcttttagacCCACACACATTCTCATGCTTGTTCTCTCGGTTCATTTATCTCGGTGCGGTGTTTGACAGCGAGCGTGTGTGCCTCTGGACGGGCTGTTTCAGCGTGGATGCTCTCTGGGCTCATCTTTTCCTCACTTCTATATTCTGTATCTGGGGCGGGACGTCTACCCACATTGATCTTCTGGGATCTGGCTTCACCTCCAGCTCAGGATGGAAGCAGTAGCTCTTTACAACTTTTGTGCCACGGAAAGCGACGAGCTTAGCTTTCAGAAGGGAGATGTACTCAAGATCACTAATATGGAAGATGATCCTAACTGGTACACAGCAGAGTTGGTAAACAGGAAGGGCTATGTACCTAAAAATTACATCAGCTTAAGGCCGCACAAGTGGTTTGCGGGCCGTATTTCCAGACATGTGGCCGAGAATCGACTGCGCCAGCAGGAGTGTGGAAGCTTCTTAgtaagagagagcgagagcgcaCCTGGAGAATTCTCCATGTCTGTGAGCTATGGGGATCATGTACAGCATTTCAAAGTGTTAAAGGACAGAGATGGCTATTACTTTGTTTGGGAGGAGATCTTCCCTTCCTTAAATCAGCTTGTGGACTTCTACAAGGTCAACAGCATAGCAAAGGAAAGAACTGTGTTTCTGAGAGATGCAGATCACACACTAAAGAGGCCCCATCACGCACATGCCCTGTTTGACTTCAATCCAGAGCACAACTCCCAGCTGCACTTCCTGCGGGGTGATGTCATAGACCTGCTGGACTGCTCCGATTCTCAGCGATGGAAAGGTCGCTGCCGTGGCCGTGTGGGATTTTTCCCCCCTGAGTACGTCCAGCCCATCTATCACTGACCCCGAAGGACGATAACGACACAAAATGCAGCACAAATCAGAAACCGATTGTTAGCATCTTTTAGTAGTTTAATGCAAGTGGAAGGATCGAGCTGAGTAAGTTTGGAAATGACTTTGCAAACAGACAGAAATGAACGTACCCAGCCACATCTACTAAAGCAAAATCCTGCTGTTGACACTAAGATGACACCTGTTGGCTTTTTAGGAAAAACACCCTAAACTATCAagcaccattaaaaaaaaaatcttcaaacaTACACTGGTGCATTGAAATGCAAAAGGGGAATTTTAATAGTATTAGTAAAATCTCTTCACTGcactttgctttgaaatttgGATATTATCTCAAAAACCTCTTTAATCAATTGCTAtatttattgcacttttttctgtgtatatattgtTCAGAACTGTCATTGtcttattttgatttgattatgtaaatgttaccatatgatgacaaaaaatatatgtacaataaaataatagcgTGCATA

Function

symbol description
grapa Is expressed in several structures, including eye; optic vesicle; pronephric duct; pronephric mesoderm; and solid lens vesicle. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 114. Orthologous to human GRAP (GRB2 related adaptor protein).

NR:

description
PREDICTED: GRB2-related adapter protein-like

GO: NA

KEGG:

id description
K23694 GRAP; GRB2-related adapter protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235652.1 True 1402 mRNA 0.44 5 15309745 15316561

Neighbor

gene id symbol gene type direction distance location
fam83ga LOC107738115,LOC107654540,LOC107581794 coding downstream 138 15302248 ~ 15309607 (-)
arhgap23a LOC107581737,LOC107654534,LOC107591523 coding downstream 66623 15180602 ~ 15243122 (-)
nmt1a nmt1,nmt1a,LOC107737859,LOC102778525 coding downstream 151404 15149891 ~ 15158341 (-)
LOC122341310 LOC107674591 coding downstream 161600 15146294 ~ 15148145 (-)
LOC122341946 LOC107720104,LOC107592690,LOC107674628 coding downstream 168724 15138220 ~ 15141021 (-)
b9d1 b9d1,LOC107737762,LOC107674617,LOC107654544 coding upstream 22401 15338962 ~ 15341877 (-)
llgl1 llgl1,LOC107720045,LOC107674688,LOC107703430 coding upstream 145733 15462294 ~ 15491956 (-)
myo15aa myo15a,LOC107703324,LOC107581768,LOC107737980,LOC107720090,LOC107674587,LOC107592412 coding upstream 177839 15494400 ~ 15523417 (-)
drg2 drg2,LOC107581792,LOC107674714,LOC107720047,LOC107703348 coding upstream 218399 15534960 ~ 15538510 (-)
znf598 znf598,LOC107591665,LOC107703429,LOC107674691 coding upstream 232792 15549353 ~ 15557114 (-)
G20344 LOC107581796,LOC107738142,LOC107654462,LOC107591562,LOC107674600,LOC107720100 non-coding downstream 55128 15252095 ~ 15254617 (-)
G20253 NA non-coding downstream 319754 14988277 ~ 14989991 (-)
G20248 NA non-coding downstream 350458 14956739 ~ 14959287 (-)
G20245 asic2,LOC107674665,LOC107737939,LOC107590420,LOC107654528,LOC102794937 non-coding downstream 457883 14849717 ~ 14851862 (-)
G20225 NA non-coding downstream 638176 14665914 ~ 14671569 (-)
G20352 epn2,LOC107674690,LOC107720043,LOC107654543 non-coding upstream 3149 15319710 ~ 15324611 (-)
G20363 NA non-coding upstream 49575 15366136 ~ 15366451 (-)
G20546 NA non-coding upstream 318511 15635072 ~ 15637612 (-)
G20571 NA non-coding upstream 504658 15821219 ~ 15821945 (-)
G20624 gna12,LOC107703403,LOC107758336,LOC107753491,LOC107592501,LOC107674729 non-coding upstream 888808 16205369 ~ 16207819 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other downstream 130386 15120806 ~ 15179359 (-)
LOC122341947 NA other downstream 164137 15141817 ~ 15145608 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other downstream 870204 14435147 ~ 14439541 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other downstream 1105395 14202930 ~ 14204350 (-)
G19933 NA other downstream 1503767 13805368 ~ 13805978 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other upstream 282209 15598770 ~ 15600348 (-)
G20680 LOC101886504,LOC101886427 other upstream 1134579 16451140 ~ 16451800 (-)
LOC122341847 NA other upstream 1136513 16453074 ~ 16455479 (-)
mafk mafk,LOC107703391,LOC107674662 other upstream 1399160 16715721 ~ 16729689 (-)
uncx uncx,LOC107703385,LOC107674712,LOC107568937,LOC107745590 other upstream 1546164 16862725 ~ 16873987 (-)

Expression


Co-expression Network