CI01000004_07903583_07906667


Basic Information

Item Value
gene id CI01000004_07903583_07906667
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7903583 ~ 7906670 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_07903583_07906667.mRNA
GTACACAAGCATTACAGAGATATGGCTCTTTAATAGTGTCGCTGAGTAAATGTAGCGGTAGGTTTGTTTACCCCTGTAAGTATCCACCCTCAAAGTGGTGCGACTCTGAAGACATTGCAGCCGAATGTGGGGTGCTGGAGCAATGCGCGAAGTTTAATGTCACAAAGCCCAACGCTGACAAAGTGAATGTGAGCCTGTACTATGAGTCTTTGTGTCCTGGATGCAGAAGTTTTCTTGTATTGCAGCTCGTGCCAACCTTCATTATGTTGTCAGACATCATGAACATTGATCTGGTTCCATATGGAAATGCACAGGAGAAAGAAGATCAGGGGAAGTACACCTACGTCTGTCAGCACGGAGAGGATGAATGTCTAGGTAACATGATTGAGACCTGCCTGATGAATAAATTAGGCATCAACGCTTTTCCAGTCATTTTTTGCATGGAGTCAGGAGCAGATGTGCTGAAAGCAGCCCAGCCTTGTCTTGGAGTCTATTTTCCTGAAGTGACATGGGATTCAGTCATGGAGTGTGTGAAGGGAGACCAGGGCAATAAATTAATGCATGAAAATGCAGTGAAAACAAGTTCTCTGAAGCCCCCTCATGAGTATGTGCCTTGGATAACCATTAATGGAGAACACACAGAGGACCTTCAAGATAAAGCAATGAATTCTCTCTTCAGTCTTGTGTGCAGTTTGTACAAGGGTGAAAAAACACCTGCTTGTGGTCAAGGGTTGAAGAAAACCAGCAGTTACTGCATGAAGTAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_07903583_07906667.mRNA True 767 mRNA 0.44 8 7903583 7906670

Neighbor

gene id symbol gene type direction distance location
CI01000004_07868939_07899539 PIK3R2 coding upstream 3377 7868620 ~ 7900206 (+)
CI01000004_07843003_07860951 NA coding upstream 41159 7843003 ~ 7862424 (+)
CI01000004_07823292_07824588 NA coding upstream 77380 7822836 ~ 7826203 (+)
CI01000004_07775338_07780352 ANGPTL4 coding upstream 122265 7775242 ~ 7781318 (+)
CI01000004_07759670_07760529 RPS28P9, RPS28 coding upstream 142586 7759509 ~ 7761023 (+)
CI01000004_07907663_07910335 MPV17L2 coding downstream 993 7907663 ~ 7910478 (+)
CI01000004_07911608_07916117 NA coding downstream 4938 7911608 ~ 7916155 (+)
CI01000004_07945349_07952716 NA coding downstream 38386 7945056 ~ 7952716 (+)
CI01000004_07954612_07959231 PDE4C, PDE4CA coding downstream 47566 7954236 ~ 7959726 (+)
CI01000004_07962260_07967751 RAB3A.L, RAB3A, RAB3AA, RAB3AB coding downstream 55590 7962260 ~ 7968607 (+)
G28791 NA non-coding upstream 75901 7827368 ~ 7827682 (+)
G28790 NA non-coding upstream 81566 7821817 ~ 7822017 (+)
G28784 NA non-coding upstream 98930 7804266 ~ 7804653 (+)
G28780 NA non-coding upstream 137194 7765563 ~ 7766389 (+)
G28779 NA non-coding upstream 138872 7764512 ~ 7764711 (+)
G28797 NA non-coding downstream 76811 7983481 ~ 7983777 (+)
G28800 NA non-coding downstream 118821 8025491 ~ 8025898 (+)
G28801 NA non-coding downstream 121580 8028250 ~ 8033712 (+)
G28819 NA non-coding downstream 370532 8277202 ~ 8284097 (+)
G28834 NA non-coding downstream 459025 8365695 ~ 8365921 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 247200 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 1329162 6570771 ~ 6572667 (+)
G28302 NA other upstream 1401496 6470028 ~ 6502087 (+)
G28165 NA other upstream 2170582 5732589 ~ 5733001 (+)
G27805 NA other upstream 2529780 5372825 ~ 5373803 (+)
CI01000004_08414451_08436256 NA other downstream 527035 8414316 ~ 8439933 (+)
G28859 NA other downstream 692565 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 1069768 8976254 ~ 8980984 (+)
G30797 NA other downstream 2590706 10497376 ~ 10497788 (+)
G31710 NA other downstream 3730581 11637251 ~ 11642400 (+)

Expression


Co-expression Network