CI01000004_07945349_07952716


Basic Information

Item Value
gene id CI01000004_07945349_07952716
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7945056 ~ 7952716 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_07945349_07952716.mRNA
GTATAAAAACAGCATTAAAAACACTGAATGATGAAATTCCCACACTCCCTTTGATGGAGGATGTCTTAAAATGGCAACATGGAAATGTGTGGGTGGATAGATGTGTGGGCTAAAAATAGCACAGTAGAAATCTCCATAAATATTCATGAATGGGGGGAAGAATCTGAGGCTACCTGCAGCTCTAAATATAACGCTTCTGCTCGGATCCCTCGCACAGGGACGAGCTATTTATAGCAGCAGCAGTGCCTCGCTCTGAGTGTGCACAGGGACCCATAGGAGATACAGCAGTAAAGATGAGGGACGGAAGCAGAAACGAAGTGGAAGCGACAGCCTCTGCCCCAAGCACAGTCCATTCAGAAGAGTGCTGCTTCTCTCTCTCTTTCTGTGTCTGTATGTCTCTCACTCCTGTATGTGGGCACATGAATAGGGTGTACCGAGTTGATTATATAATACAGTGTAAGAGACATCTGTCTTGTCCTCATGCAACATCTGTGAAAGATGTGAATGAGGACATGCAGAAGAGACGCAGATTGTACTTAATTCAGCAGGACGAGTACTACACCTTACAAATTCACATGTGCTTTGCCAGTTTTGATGTTGAGAATGGGCTGTCGGTGGGCCGCAGTCCTCTGGAGTCCCAGGCCAGTCCAGGCTCCGGCCTTGTGCTGCAGGCCAATTTCCCTCACAGCCAGCGACGGGAGTCCTTCCTGTATCGCTCTGATTCCGACTTTGACCTTTCACCGAAGGCCATGTCCCGAAACTCATCCACGGCCAGACGATGTGAACTAGTGTGTCTAATTAATCGCAGGTCACCAACTCTTGTTGTCTTTTCAAAGGGAAGAGAGTTTGAAGCACTGGGAAGTCAACTGGCTAAATCGACATGGAGAAGACATGATAGTTACACCATTTGCACAGGTCCTTGCCAGCTTGAGGACTGTGCGGAGCAACTTTGCCGTATTGACCCATCAGCAAGACCGTATCCCGAGCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_07945349_07952716.mRNA True 989 mRNA 0.48 6 7945056 7952716

Neighbor

gene id symbol gene type direction distance location
CI01000004_07911608_07916117 NA coding upstream 28901 7911608 ~ 7916155 (+)
CI01000004_07907663_07910335 MPV17L2 coding upstream 34578 7907663 ~ 7910478 (+)
CI01000004_07903583_07906667 NA coding upstream 38386 7903583 ~ 7906670 (+)
CI01000004_07868939_07899539 PIK3R2 coding upstream 44850 7868620 ~ 7900206 (+)
CI01000004_07843003_07860951 NA coding upstream 82632 7843003 ~ 7862424 (+)
CI01000004_07954612_07959231 PDE4C, PDE4CA coding downstream 1520 7954236 ~ 7959726 (+)
CI01000004_07962260_07967751 RAB3A.L, RAB3A, RAB3AA, RAB3AB coding downstream 9544 7962260 ~ 7968607 (+)
CI01000004_07971396_07974484 NA coding downstream 18608 7971324 ~ 7974503 (+)
CI01000004_07987968_07989044 AGTR1A coding downstream 32651 7985367 ~ 7989529 (+)
CI01000004_07993172_07997413 GYG1A coding downstream 40456 7993172 ~ 7997413 (+)
G28791 NA non-coding upstream 117374 7827368 ~ 7827682 (+)
G28790 NA non-coding upstream 123039 7821817 ~ 7822017 (+)
G28784 NA non-coding upstream 140403 7804266 ~ 7804653 (+)
G28780 NA non-coding upstream 178667 7765563 ~ 7766389 (+)
G28779 NA non-coding upstream 180345 7764512 ~ 7764711 (+)
G28797 NA non-coding downstream 30765 7983481 ~ 7983777 (+)
G28800 NA non-coding downstream 72775 8025491 ~ 8025898 (+)
G28801 NA non-coding downstream 75534 8028250 ~ 8033712 (+)
G28819 NA non-coding downstream 324486 8277202 ~ 8284097 (+)
G28834 NA non-coding downstream 412979 8365695 ~ 8365921 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 288673 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 1370635 6570771 ~ 6572667 (+)
G28302 NA other upstream 1442969 6470028 ~ 6502087 (+)
G28165 NA other upstream 2212055 5732589 ~ 5733001 (+)
G27805 NA other upstream 2571253 5372825 ~ 5373803 (+)
CI01000004_08414451_08436256 NA other downstream 480989 8414316 ~ 8439933 (+)
G28859 NA other downstream 646519 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 1023722 8976254 ~ 8980984 (+)
G30797 NA other downstream 2544660 10497376 ~ 10497788 (+)
G31710 NA other downstream 3684535 11637251 ~ 11642400 (+)

Expression


Co-expression Network