G33887


Basic Information

Item Value
gene id G33887
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7329347 ~ 7329619 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU49918
GACAGATACAGGCTACAATAGGCAATAGAGACCTTATTTACATCTCATATCCCCTCCCCAAACAAATCAACAACACGGGCCTAATGAGAAAGTGATAGAGCTGCTAAGCTGAAGCTAATGACTACTTTAGTGTCTCTGCATATGTGATGTATACACGCGCTTAAACATGAATGCAGTTCGAggtacaaaatataaaacatttttgtcagtgTTGTAATGCTCATGAGAGTTGTTACTATTGTACTTTTTAGTTGATGAGAACGAGAACCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49918 True 273 lncRNA 0.39 1 7329347 7329619

Neighbor

gene id symbol gene type direction distance location
fbxw2 fbxw2,LOC107723354,LOC107587370,LOC107691038,LOC107597196,LOC107740938 coding upstream 3318 7320999 ~ 7326029 (+)
ncs1a ncs1,ncs1a,LOC107693863,LOC107691040,LOC107740936 coding upstream 10699 7304216 ~ 7318648 (+)
ntmt1 ntmt1,LOC107723349,LOC107691051,LOC107597156,LOC107693833,LOC107740971,LOC107587381 coding upstream 49204 7276985 ~ 7280143 (+)
ptpa ptpa,ppp2r4,LOC107723355,LOC107597098,LOC107693860,LOC107587375,LOC107691031 coding upstream 172112 7149158 ~ 7157235 (+)
lrsam1 lrsam1,LOC107597066,LOC107587365,LOC107723333,LOC107740956 coding upstream 195414 7124060 ~ 7133933 (+)
gas1b LOC107691047,LOC107597997,LOC107723329,LOC107740940,LOC107693835,LOC107587379 coding downstream 4758 7334377 ~ 7336547 (+)
dab2 LOC107723357,LOC107597220,LOC107691042,LOC107693866,LOC107587364,LOC107740939 coding downstream 16371 7345990 ~ 7355235 (+)
hspb15 hspb15,LOC107587387,LOC107740946,LOC107723340,LOC107691052,LOC107693867 coding downstream 26075 7355694 ~ 7360060 (+)
LOC122345181 ns:zf-e68,myhz1.2,myhz1.1,myhz2,myhc4,LOC107598006 coding downstream 30660 7360279 ~ 7370368 (+)
m17 LOC107681844,LOC107598316,LOC107723338,LOC107660776,LOC107740965,LOC107587449 coding downstream 141576 7471195 ~ 7473590 (+)
LOC122344649 NA non-coding upstream 88637 7222397 ~ 7240710 (+)
G33857 NA non-coding upstream 161205 7166608 ~ 7168142 (+)
G33853 LOC107723360,LOC107740932,LOC107691030,LOC107597084,LOC107587366 non-coding upstream 181731 7147035 ~ 7147616 (+)
G33852 NA non-coding upstream 183341 7145060 ~ 7146006 (+)
G33850 NA non-coding upstream 194225 7134907 ~ 7135122 (+)
G33888 NA non-coding downstream 3850 7333469 ~ 7333778 (+)
G33899 NA non-coding downstream 118157 7447776 ~ 7488963 (+)
G33903 LOC107723325,LOC107598017,LOC107740964,LOC107587450,LOC107681865,LOC107660777 non-coding downstream 134752 7464371 ~ 7482987 (+)
G34064 NA non-coding downstream 310757 7640376 ~ 7640732 (+)
G34071 NA non-coding downstream 380684 7710303 ~ 7711178 (+)
gpr107 LOC107723348,LOC107691037,LOC107597176,LOC107693862,LOC107740935 other upstream 28618 7286568 ~ 7300729 (+)
kank1b kank1b,LOC107730999,LOC107691025,LOC107597012,LOC107587402 other upstream 340575 6978548 ~ 6988772 (+)
si:dkey-34e4.1 si:dkey-34e4.1,LOC107700938,LOC107596916,LOC107710760,LOC107587412 other upstream 503981 6793365 ~ 6825366 (+)
dab2ipb dab2ipb,LOC107693836,LOC107710761,LOC107700936,LOC107726296 other upstream 566539 6617276 ~ 6762808 (+)
G33664 NA other upstream 837361 6473347 ~ 6491986 (+)
G33878 c9,LOC107691041 other downstream 8849 7338468 ~ 7344078 (+)
LOC122345182 ns:zf-e68,myhz1.2,myhz1.1,myhz2,myhc4,LOC107598006,LOC103370545,LOC107723326 other downstream 43989 7373608 ~ 7449497 (+)
G33891 myhz1.2,myhz2,myhz1.1,ns:zf-e68,myhc4,mmyhl1,myhb,mmyhl2,LOC107723326,LOC105016875,LOC105016873,LOC106565367,LOC107088603,LOC107384188,LOC107093413,LOC103461378,LOC108241321,LOC107083053,LOC107083052,LOC107378336,LOC106938339,LOC106596646,LOC106596400,LOC106585883,LOC106597527,LOC106594844,LOC108261437,LOC106595486,LOC106598139,LOC108261508,LOC103379498,LOC103379499,LOC108444093,LOC101482140,LOC107660779,LOC108443910,LOC108415768 other downstream 90521 7420140 ~ 7520241 (+)
G33890 myhc4,myhz2,ns:zf-e68,myhz1.1,myhz1.2,LOC107723326,LOC107660779,LOC108415768 other downstream 96086 7425705 ~ 7446216 (+)
svopb LOC107723362,LOC107681854,LOC107598053 other downstream 229321 7558940 ~ 7567263 (+)

Expression


Co-expression Network