G33903 (LOC107723325,LOC107598017,LOC107740964,LOC107587450,LOC107681865,LOC107660777)


Basic Information

Item Value
gene id G33903
gene name LOC107723325,LOC107598017,LOC107740964,LOC107587450,LOC107681865,LOC107660777
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7464371 ~ 7482987 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU49970
CTTAAGGTTCCTGGGCTGCTGTCGGCGTTCCAGTGCATGCTTTCTGTGTAGCTCCCTCTGGCGTCGACTGTTGTACTCCTCCTGGTTCTCCAACTCGGTTTGATGCTGGTGTCGCATCAGTTCAAAGCGTAGCCTTTGTAAGGTTTGTAGTTGCCGCTGTTCCAGTTCTTGGGTGGACTCATCCTGCCTGATCATCAATGCATGCTCCATTTCTTTTTGTGTCTTCTTCTTGTTAAGCTCCTTTAACACAAAGAGTCATTTACGATTAATACTTAAATcgtttttaaaaggtttttaaaaagaactttGTGATTTCAAACAGATTTCATAGCAGAAGATAGTGTGATCAACACCATATATCGCTGTATATTGCATACACACTGCATGTCAACAGTTGGGGTGagtaagatttgtttttgaaggaaattagtatttgtttttcagcaagggtgcattaattcacttattaaaagtatttgtatAGGCtttaactttttcaaataaatgctgttctgatCGTTTATGAATAGTCTTACATTTCAAGCAgcacagctttttttaatatggataataataatgttatttaagcACCAAATTggcatattagaacgatttcttaaagatcatgtgacaatgaaaaatgaaaaggatGGATAAAAATTCGGCCTTGCCACCAAAggaataaaatctattttaaatatattaaaatacaaaactgtacTTTTCAAATAACGCGAATCCAAATCGCACAcacccaaacttttaaaaaggaactacgtgtgtatatgtttttgtcAGACAGCAATCTGGATATCACTCAGATGTCTAAATGAAACCTCAGAAttcacaacaacaaaacaatgtgCTTGAGACGTTCTTTGTTGTGACTCATATTATTTCTTGCCTCCCGCATTTGCTCTTGTTCAAACTCGTGCTTCTTGATAAGGCTTCTTCTTTTTAGAGCACGGCAGCTCCTTTCGTAAACCAGTCTTTGCTGGTTCAACagctgggcctcctcctcggcCTGGGAGCGCTGCATTGTTTCTTTATGCCGTGACAAGCGCTCCTGTTTCTCCTCTTTTGGTGTATCGGAGTCTTCATTCATTTCCTCTGTTGTCTG

Function

NR:

description
PREDICTED: serine/threonine-protein kinase TAO3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49970 True 1120 lncRNA 0.38 2 7464371 7482987

Neighbor

gene id symbol gene type direction distance location
LOC122345181 ns:zf-e68,myhz1.2,myhz1.1,myhz2,myhc4,LOC107598006 coding upstream 94003 7360279 ~ 7370368 (+)
hspb15 hspb15,LOC107587387,LOC107740946,LOC107723340,LOC107691052,LOC107693867 coding upstream 104311 7355694 ~ 7360060 (+)
dab2 LOC107723357,LOC107597220,LOC107691042,LOC107693866,LOC107587364,LOC107740939 coding upstream 109136 7345990 ~ 7355235 (+)
gas1b LOC107691047,LOC107597997,LOC107723329,LOC107740940,LOC107693835,LOC107587379 coding upstream 127824 7334377 ~ 7336547 (+)
fbxw2 fbxw2,LOC107723354,LOC107587370,LOC107691038,LOC107597196,LOC107740938 coding upstream 138342 7320999 ~ 7326029 (+)
cabp7b cabp7b,cabp7,LOC107587385,LOC107681866,LOC108270594 coding downstream 11227 7494214 ~ 7501569 (+)
arpc5lb arpc5lb,arpc5la,LOC107598357,LOC107681842,LOC107723334,LOC107740947,LOC107587390 coding downstream 22436 7505423 ~ 7511508 (+)
ssh1b LOC107597252,LOC107681862,LOC107723353,LOC107660766,LOC107740951 coding downstream 84786 7567773 ~ 7578212 (+)
coro1cb LOC107723343,LOC107597269,LOC107681860,LOC107587361,LOC107740952 coding downstream 98543 7581530 ~ 7591624 (+)
pkn3 LOC107681845,LOC107737478,LOC107587363,LOC107597294,LOC107712357,LOC107664395 coding downstream 116515 7599502 ~ 7613888 (+)
G33888 NA non-coding upstream 130593 7333469 ~ 7333778 (+)
G33887 NA non-coding upstream 134752 7329347 ~ 7329619 (+)
LOC122344649 NA non-coding upstream 223661 7222397 ~ 7240710 (+)
G33857 NA non-coding upstream 296229 7166608 ~ 7168142 (+)
G33853 LOC107723360,LOC107740932,LOC107691030,LOC107597084,LOC107587366 non-coding upstream 316755 7147035 ~ 7147616 (+)
G34064 NA non-coding downstream 157389 7640376 ~ 7640732 (+)
G34071 NA non-coding downstream 227316 7710303 ~ 7711178 (+)
LOC122345618 NA non-coding downstream 230627 7713614 ~ 7725823 (+)
G34075 LOC107664520,LOC107748505,LOC107597375,LOC107712354,LOC107664410 non-coding downstream 234986 7717973 ~ 7780924 (+)
G34104 NA non-coding downstream 382180 7865167 ~ 7934699 (+)
LOC122345182 ns:zf-e68,myhz1.2,myhz1.1,myhz2,myhc4,LOC107598006,LOC103370545,LOC107723326 other upstream 14874 7373608 ~ 7449497 (+)
G33890 myhc4,myhz2,ns:zf-e68,myhz1.1,myhz1.2,LOC107723326,LOC107660779,LOC108415768 other upstream 18155 7425705 ~ 7446216 (+)
G33878 c9,LOC107691041 other upstream 120293 7338468 ~ 7344078 (+)
gpr107 LOC107723348,LOC107691037,LOC107597176,LOC107693862,LOC107740935 other upstream 163642 7286568 ~ 7300729 (+)
kank1b kank1b,LOC107730999,LOC107691025,LOC107597012,LOC107587402 other upstream 475599 6978548 ~ 6988772 (+)
svopb LOC107723362,LOC107681854,LOC107598053 other downstream 75953 7558940 ~ 7567263 (+)
tmem119b LOC107681861,LOC107597286,LOC107587378,LOC107735096 other downstream 109976 7592963 ~ 7597520 (+)
dpm2 dpm2,LOC107664400,LOC107712384,LOC107681851,LOC107598396,LOC107587395 other downstream 189840 7672827 ~ 7674636 (+)
p2rx1 p2rx1,LOC107598068,LOC107712377,LOC107664512,LOC107587372 other downstream 271087 7754074 ~ 7797968 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other downstream 518591 8001578 ~ 8010599 (+)

Expression


Co-expression Network