G34418


Basic Information

Item Value
gene id G34418
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 8564645 ~ 8565496 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU50715
CCTGCCGAGGTTGTCTGAGATAGTACCGAATCAGCTGTGTGGAGATTGGTGACCATGGTGCTGGCAGCTGTGTCAGAGAGGGTGGCAGGATAGTAATATTGAGTCTCAGACGTCTCTCCCTCCAGACTCTCAGACTGAGAGATTACGGCCTATGAATACACGCATATGAGTACCTACTAACGCAACCACGTCTTTCACATAAAAAGCCTTCAGCAACAAACTCAAGCTTCTATTGCAGTTCTATTGCGAACAATTAAATACCTGTGTTACAGGCGGTGTGGCTGCCTGAGTTACTGTGGGAAACCCAGTCACCACGCTGACCGCTGCAGCCCCATCCGCCTGCCCTTCTACCTGCCCGTCAGCCAAGTGGATCACTCGGTATGTCACCTGCCCCCTGTTCCTTCCGTTTTTAAAAGATGATACTTAATTTGTGGATCTGCGGAGAATGCGGCAGCAGACTGGATGGCTGTGATAGCCAGTGGGTCGTCTGCGGTTTCGGCAACACCTGGTAAAGCAGCACATGCAGGTTATTGTTTGGCAAATTTCCAAATCTCACTGATGTCGACTAGTTTTTCCAGGCATGCCCTGGATAGGATTTCGCGTTTTGCCTAATATGTCAGggaattgtctttttttccctaTTTACGTGCTCTGCAGCCCTCATacctcatttgcatttcatttattgaaGATGCATGCAACTATTGATcgattatgtatttatttatgatttaacgcCATGCCTGCAACAGTGGCTACATTCATGGCAAGAGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50715 True 776 lncRNA 0.47 2 8564645 8565496

Neighbor

gene id symbol gene type direction distance location
bco2a bco2a,bco2,LOC107597692,LOC107709687,LOC107677445,LOC107587333 coding upstream 119734 8436564 ~ 8444911 (+)
sdhda LOC107681256,LOC107598448,LOC107717883 coding upstream 129262 8432779 ~ 8435383 (+)
zbtb44 zbtb44,LOC107717865,LOC107597664,LOC107587334,LOC107722796 coding upstream 150567 8400980 ~ 8414078 (+)
adamts8a adamts8a,LOC107681254,LOC107717867,LOC107587335,LOC107722779,LOC107677441,LOC107598150 coding upstream 164153 8387887 ~ 8400492 (+)
gig2o LOC107597653,LOC107717871,LOC107722791,LOC107677423,LOC107587339 coding upstream 275076 8288285 ~ 8289569 (+)
cfap77 cfap77,LOC107677414,LOC107598460,LOC107587433,LOC107741446,LOC107681220 coding downstream 9515 8575011 ~ 8589177 (+)
barhl1a barhl1,barhl1a,LOC107598469,LOC107741447,LOC107677415,LOC107681223,LOC107587471 coding downstream 23938 8589434 ~ 8593532 (+)
spaca9 spaca9,LOC107598478,LOC107681227 coding downstream 65895 8631391 ~ 8632797 (+)
grin1b grin1b,grin1,LOC107597863,LOC107757976,LOC107709703,LOC107681230 coding downstream 82251 8647747 ~ 8673117 (+)
LOC122345092 LOC107597885,LOC107681245,LOC107757974,LOC107690669,LOC107587326 coding downstream 112005 8677501 ~ 8685223 (+)
G34409 NA non-coding upstream 24927 8532539 ~ 8539718 (+)
G34398 NA non-coding upstream 91300 8472435 ~ 8473345 (+)
G34387 NA non-coding upstream 104406 8456788 ~ 8460239 (+)
G34384 NA non-coding upstream 116367 8447852 ~ 8448278 (+)
G34383 NA non-coding upstream 117624 8446798 ~ 8447021 (+)
G34449 NA non-coding downstream 76695 8642191 ~ 8642681 (+)
G34466 NA non-coding downstream 297350 8862846 ~ 8864201 (+)
G34470 NA non-coding downstream 308599 8874095 ~ 8874695 (+)
G34472 NA non-coding downstream 372769 8938265 ~ 8939370 (+)
G34480 LOC107560223,LOC107711009,LOC107681213 non-coding downstream 428400 8993896 ~ 9001220 (+)
snx19a snx19a,LOC107597619,LOC107681657 other upstream 259199 8289720 ~ 8305446 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other upstream 554046 8001578 ~ 8010599 (+)
p2rx1 p2rx1,LOC107598068,LOC107712377,LOC107664512,LOC107587372 other upstream 766677 7754074 ~ 7797968 (+)
dpm2 dpm2,LOC107664400,LOC107712384,LOC107681851,LOC107598396,LOC107587395 other upstream 890009 7672827 ~ 7674636 (+)
tmem119b LOC107681861,LOC107597286,LOC107587378,LOC107735096 other upstream 967125 7592963 ~ 7597520 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other downstream 298706 8864202 ~ 8871518 (+)
si:ch211-102c2.4 NA other downstream 1230885 9796381 ~ 9799358 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other downstream 1498721 10064217 ~ 10139733 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other downstream 2152035 10717531 ~ 10736059 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other downstream 2361327 10926823 ~ 10933753 (+)

Expression


Co-expression Network