G34688


Basic Information

Item Value
gene id G34688
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 9248259 ~ 9251790 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU51096
tgaaaaattacacttgattttttgaatatatttttagtgtttttaaaagattaaatgtaaaaataagacaTACTGTGCATCcctaaataatgaataattctaTAAGCATAtagaatacaaataatacaaatataatattcaattaaactttaaaatctagtttgaaatgaatacttttaagtGTTAATGCAGAACACAAAGTCAACTACAGCACTGAATACATAACAATGAATTCTTCAGAGATTTGGCCCAAGTCTCCAAAACCTTCTTAAGAAAAGAGGGCGGCAAAACAGATTGACTTAGAGTAACTCTTTTTGACAGCGTTTGTAGGAGCAACAAAGATCAACCCTGCTTCTCAGACGGGGCACAGCTCAACATCTAACCAGATAAACTGAGTGGAATTTCAACAAGACATAGCTAGCTCTACTCTTTACTGTGAGACACAGacttttgtctttctctctgcttaTTAACTTCAATGGCTCATTTCGTGCGTCACAATTGATTAATGTGATCTGTTTTAACTAGCTGAACCTGCATGATTTGCTTCACGGCTTCTAATACCGAATGGAGATCTTCAAACTTTTCCCTTTAGAGCACACACAGGCCTGAATACAGATATTTTAGACAAAGCATACAGAAGCATATGCATACAAAAGCATACATAAATGAGAGCAAGCCAGCACaacattaaaagcaaaagtGGATTATTTTAGTAACAACTTGGCCACTGGTAGCCATATCATTTTGTTGATGTACGTTCAgtcataaaacataataaactcttttataattgaatacaaacacatatttgGGAACCACTGCCAAAAGCATATAAGAAATATTAACAGACAAGTTAGCTCATTAACAGGCAACATAAGGTTAAATTTTCATTAATAAGTCATTAACAATTATATTCATAACTGATCATTTTTTATGTACTTCcaaatatgaatatacataagaaaaaatataaatcaaagttTCATTACGTACATAGACATAAAATAATGATCTGTACAACATTTCGTAATATCATAATGTCTGGTTAAGGGGTCAAATTAATCTAATGAAAAAGTTTGATGTAGAAAGTAAATATAAaggcataaaaaaatcaatgataAAAGGCATAAAACACATGATAAAAGATGTGGGGTGGCATCTGAGACTCTGCACGACCTCCTAAAGGAACTAAAGTTCTGTTTTACCAAGGTCCCAATCATTTCAGCCTGACCTTACATATAAGTGCGCAGATGTTGTTTTGTGAACCTGACACATTGTAATGCAGGCTTTGCAAAGAGAGTGTTTCTGAAAGATGGAGCAGCGCCAACTCTATTAAACAACAAATTCCCAACACACAAGTAAGCGCTGGTGCTCTTTTTGCAAAAAACAGAGAAAGCACACGCAGAAAGGTGCAGCAGCAAAATGGCTTGATAAATTCAAAATGTCGGAAAAAGGTCGTAAGATCTAAATTGCGACTATGATTGAtgcaagaaagagaaaaatgactttaaaaaatgatgtcATGACCCCTTGAAAGCTAATGAAAGCATTGCCAAGAATTCTTGTGATCAGAGTCTTAAAGGACATTTCAAGTCAGTGGAAGCAGCAGTCCAGGCCTCCTGTGCTGGATGGAAATCAAAGCACATCTTTCTTTCTGAATAACTGATGAACTATACCAGCTGGACTCATGTAGAAGTATGTTTAAACAcgcacactctcactcacactcgcTATGTTTACGTACAAACACGAATAATAACTTTGAGTGAAATTAAGCAGCCATGCAGAATGGCCTTGGGAGGGATGTGAGGAATGCTGGAGGGTGGatgagtctgtgtgtgaatGCTTTCATACACAGCTGTTGTCCTCCCCTCTGTGTTCTCTTCTCTTGGGTAATTACTCTGATTATAGAGAGATAGAGCTGATGAGAGCAAATCCTCCTGTGCTCACAATCACATAGATAAATATGGTCCACAGAGGTGCCACAAAACCCAAACTGGCAgatgtgctttttttgtatatgaTCACCTATATGCCTTTCTCAACTGACGCTCCTTATGTTCAACTTAAAAGGATGGTctagtcaaaaataaaacttctgtcatcatttactcacacttaCGTGGTTCCAAATCCGTATGTCTCGCTTTTTATCCACtgatgatgaaataaaatattcttaaaaagtGGCTTCTGGCATTGGGGCTTTTACGTATAGACCTctaaaacattcttcaaaatttgCATTCTACAtatcataaaacatttcatttttaattacatgacCATAAATAAGAACCAAATTTTCCCTTTTGGGTGCAGATGTATACTGTAGGATATACTACTGGTCATAATTCTGAAAAGATActgatattttaatgtttttaagtctCTTATGCGTCCAAGGCGGTAAGTGTTTGATACAGTTTGTAccttaatattgtgaaatattattacagtttttacttctgtgatggcaaagaaTCATTTTAGCAGCCAGTACTCTAGACTTCAATgtaaatgctgatttggtgagcataaattacttctttcaaaaacattaaaaaagctaaattattcCAAATGtttagtgtgtatatatctaaTGCAATTCAGCATAAGCATCACATGCTGTTCTGTATTTCTGAAAAAGATCAGGAACAGAGTGTGGCTCATTTATTCCTGGAATGAGCTGTCAGCACCTGCCAACCAGTCAGGCACATTCAGATCAGAGTCATTTACCGTCTGAAATATTCGGAACATATTGCCGCATAAAATGTCTGCTGCCGCTGTGTGAGCAATAAAAGCTCAGACCCACAATCATGTGACGAGCCGATCTGTTATAAGTCATACTTAAGAACAGCACGGACCTCCATTTTGGAAAATGGACACCACTATCACAATCTCAGTCATAAACAGCAGCAGGTGGTCACTTCAACCTCCCCTTTTGTCCTATAATCCTGTGTACCTCAGTATCATATTGCAGTGACTGTATCGAGGGAGGTGCCTGAAGGGCTAATTTTACTCTGGCCTTGTCCAGTGTGAGAGGAATGTGGGCACGTGAATGCTTGTACAACAGAAGAACTAGAGATTGGCACTTAGCTAAGCTCCGCCTCATGACTAATCATACCTCAGCAGTCAGCAACTGTTGTGTCCCTCCAGAGGTGCAAAAATTTGAGAATGCATCATACGGAGCCACAGCTCGAAATTCGCCCCTCAAATCTCAACTGGTACCTGTAGGCATCGGTCAGCTATCCCACACTCCACATTCCCCAACCTCATGGTCTGGGATATTCTTACATATAAGCGCAGAATGATCAGTGCATGACAGCAAAGTACAGCGAGATCGATTCGAAAGCATAAGGGTTTGGTCAAAAGTTATGTGAATCCTAATTTTGAGTTTACTcatagaaatgtaatttttggctttagtagtagtagtagtagtaattaaaaaatagtaGTAATTTTCAATACTACTTAGGGCAGACAGGGTGGATAGTATGAtagattttatatgaaataattt

Function

NR:

description
palmitoyltransferase ZDHHC6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51096 True 3532 lncRNA 0.37 1 9248259 9251790

Neighbor

gene id symbol gene type direction distance location
zgc:162952 zgc:162952,LOC107681237,LOC107709843,LOC107715755,LOC107690681 coding upstream 124382 9107949 ~ 9123877 (+)
b3galt8 LOC107709844,LOC107681239,LOC107560227,LOC107754785,LOC107587317,LOC107690696 coding upstream 141055 9105500 ~ 9107204 (+)
tncb tnc,LOC107715756,LOC107681236,LOC107690680,LOC107709842,LOC107560216 coding upstream 143393 9072780 ~ 9104866 (+)
traf2a traf2a,LOC107587320,LOC107690679,LOC107715757,LOC107560229,LOC107709841,LOC103036375,LOC108423724 coding upstream 231878 9008526 ~ 9016381 (+)
npdc1b LOC107709839,LOC107560231,LOC107690676,LOC107681258 coding upstream 257236 8972917 ~ 8991023 (+)
zgc:110329 zgc:110329,LOC107673367,LOC107709832,LOC107594991,LOC107587313,LOC107721550,LOC107656494,LOC108434515 coding downstream 27327 9279117 ~ 9287528 (+)
slc4a5a slc4a5,LOC107709849,LOC107721547,LOC108434517,LOC107656495 coding downstream 43406 9295196 ~ 9316541 (+)
zgc:113436 zgc:113436,LOC107656483 coding downstream 67707 9319497 ~ 9323538 (+)
abcb9 abcb9,LOC107709851,LOC107721545,LOC107656484,LOC107587418 coding downstream 72430 9324220 ~ 9329844 (+)
vps37ba vps37b,LOC107673398,LOC107594993,LOC107709855,LOC107656485,LOC107587312,LOC107721558 coding downstream 78543 9330333 ~ 9340363 (+)
G34689 NA non-coding upstream 246 9246910 ~ 9248013 (+)
G34480 LOC107560223,LOC107711009,LOC107681213 non-coding upstream 247039 8993896 ~ 9001220 (+)
G34472 NA non-coding upstream 308889 8938265 ~ 8939370 (+)
G34470 NA non-coding upstream 373564 8874095 ~ 8874695 (+)
G34466 NA non-coding upstream 384058 8862846 ~ 8864201 (+)
G34725 NA non-coding downstream 109069 9360859 ~ 9433507 (+)
G34747 LOC105896809,LOC106958509,LOC107671222,LOC107690788 non-coding downstream 226815 9478605 ~ 9565907 (+)
G34840 NA non-coding downstream 513346 9765136 ~ 9765347 (+)
G34841 NA non-coding downstream 514180 9765970 ~ 9766349 (+)
G34842 NA non-coding downstream 515504 9767294 ~ 9767821 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other upstream 376741 8864202 ~ 8871518 (+)
snx19a snx19a,LOC107597619,LOC107681657 other upstream 942813 8289720 ~ 8305446 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other upstream 1237660 8001578 ~ 8010599 (+)
p2rx1 p2rx1,LOC107598068,LOC107712377,LOC107664512,LOC107587372 other upstream 1450291 7754074 ~ 7797968 (+)
dpm2 dpm2,LOC107664400,LOC107712384,LOC107681851,LOC107598396,LOC107587395 other upstream 1573623 7672827 ~ 7674636 (+)
si:ch211-102c2.4 NA other downstream 544591 9796381 ~ 9799358 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other downstream 812427 10064217 ~ 10139733 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other downstream 1465741 10717531 ~ 10736059 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other downstream 1675033 10926823 ~ 10933753 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other downstream 1794689 11046479 ~ 11064446 (+)

Expression


Co-expression Network