G34747 (LOC105896809,LOC106958509,LOC107671222,LOC107690788)


Basic Information

Item Value
gene id G34747
gene name LOC105896809,LOC106958509,LOC107671222,LOC107690788
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 9478605 ~ 9565907 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU51186
tttttttttttttttttttataaacattaattttctcttttaattgaACGTTTGGGCggctcttaaaagagcctttgttttttgaaaatctggtCCGGGTGAAATTTAACCGCCAAAACCATACAGCGTGCGGCCTTGACGCTTCAGAGCGTAAACTACGTCCATAGCGGTCACAGTCTTGCGCTTGGCGTGCTCGGTGTAGGTCACGGCGTCACGAATAACGTTTTCAAGAAACACTTTTAGTACACCTCGCGTCTCTTCATAGATCAGGCCAGAAATACGCTTGACGCCACCACGACGCGCTAAACGACGAATAGCAGGCTTCGTGATTCCTTGGATGTTATCTCTCAAAACTTTGCGGTGACGCTTTGCGCCACCTTTCCCAAGCCCCTTCCCGCCTTTTCCTCGACCAGACATGATAGCGAACGGAAAACTCTGACACGCG

Function

NR:

description
PREDICTED: uncharacterized protein LOC105896809

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51186 True 445 lncRNA 0.47 2 9478605 9565907

Neighbor

gene id symbol gene type direction distance location
tcima zgc:110340,LOC107587466,LOC107594995,LOC107709856,LOC107673427,LOC107656486 coding upstream 76945 9400659 ~ 9401660 (+)
ppp3cca ppp3cca,LOC107709853,LOC107673394,LOC107656499,LOC107721549 coding upstream 106683 9341465 ~ 9371922 (+)
vps37ba vps37b,LOC107673398,LOC107594993,LOC107709855,LOC107656485,LOC107587312,LOC107721558 coding upstream 138242 9330333 ~ 9340363 (+)
abcb9 abcb9,LOC107709851,LOC107721545,LOC107656484,LOC107587418 coding upstream 148761 9324220 ~ 9329844 (+)
zgc:113436 zgc:113436,LOC107656483 coding upstream 155067 9319497 ~ 9323538 (+)
htra4 htra4,LOC107750178,LOC107672779,LOC108434275 coding downstream 175244 9741151 ~ 9750443 (+)
lman2lb LOC107709866,LOC107673435,LOC107595003,LOC107672798,LOC107592340 coding downstream 202348 9768255 ~ 9772485 (+)
zgc:64051 NA coding downstream 210723 9776630 ~ 9779888 (+)
ccdc117 LOC107673415,LOC107709873,LOC107595009,LOC107750174,LOC107672783,LOC107592335 coding downstream 247289 9813196 ~ 9816869 (+)
rnf181 rnf181,LOC107595010,LOC107750183,LOC107672715,LOC107592411 coding downstream 263210 9829117 ~ 9831937 (+)
G34725 NA non-coding upstream 45098 9360859 ~ 9433507 (+)
G34688 NA non-coding upstream 226815 9248259 ~ 9251790 (+)
G34689 NA non-coding upstream 230592 9246910 ~ 9248013 (+)
G34480 LOC107560223,LOC107711009,LOC107681213 non-coding upstream 477385 8993896 ~ 9001220 (+)
G34472 NA non-coding upstream 539235 8938265 ~ 8939370 (+)
G34840 NA non-coding downstream 199229 9765136 ~ 9765347 (+)
G34841 NA non-coding downstream 200063 9765970 ~ 9766349 (+)
G34842 NA non-coding downstream 201387 9767294 ~ 9767821 (+)
G34861 LOC107709872,LOC107595007,LOC107673413 non-coding downstream 242542 9808449 ~ 9810850 (+)
G34905 NA non-coding downstream 442140 10008047 ~ 10028821 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other upstream 607087 8864202 ~ 8871518 (+)
snx19a snx19a,LOC107597619,LOC107681657 other upstream 1173159 8289720 ~ 8305446 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other upstream 1468006 8001578 ~ 8010599 (+)
p2rx1 p2rx1,LOC107598068,LOC107712377,LOC107664512,LOC107587372 other upstream 1680637 7754074 ~ 7797968 (+)
dpm2 dpm2,LOC107664400,LOC107712384,LOC107681851,LOC107598396,LOC107587395 other upstream 1803969 7672827 ~ 7674636 (+)
si:ch211-102c2.4 NA other downstream 230474 9796381 ~ 9799358 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other downstream 498310 10064217 ~ 10139733 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other downstream 1151624 10717531 ~ 10736059 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other downstream 1360916 10926823 ~ 10933753 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other downstream 1480572 11046479 ~ 11064446 (+)

Expression


Co-expression Network