si:ch211-102c2.4


Basic Information

Item Value
gene id si:ch211-102c2.4
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 9796381 ~ 9799358 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU51316
ATTTAAGAGCAGTCCCTCCTTGCAGATTCAAAGAAATATCTGTTGTCCATCAGTCATCATGCATCTAATAACCACATTTCTGTTAATGATCCTAATAGGTCACGGCACATCTGAATATCTACAGCAACTCATCTGTCCCTATGGGAACAAGAATACAACTCTGAACAGGGTGTGGTGCAAAAGAGATACCCATGATGAAAACTGCTGTACGGGCTTCTCTTTCCAGAAAGGCATCAACGTTTTAGAGGAAGGCAACATAGTTGTGACAGATAATGGAAAGTCCTTTACCATCTCGGTGAAGAGACTCACGCAAGGAGATGGAGTCTACTGGTGTGGGTTCATGACTGCAAACAATATCATTGTTAAACTGGCCGAGAATTACTTTACTAACACCCCATTTAACTTCGTTTGGTCCATCTTCCGctggattttattcattttgctcCCGGTGACGACCATTTCAACCCACATTTATATAAACCGCAATCATAGAGATACGAAGATAACATAACAAATTACAGGAAGTCACACGCCAAAGAAAAGTGGCTGAAGAATGAGGCAATCATCTGCCAGTAAATGTAAACGTAGTTCGTTATTTTAACTCATGGTAATATTTTTAGTACAAAAATGCTCAGTGACAACAACAGCATGACAATattatgtttcatttgttttgtaacaaCAGCGTAAAGTTTGGCGTTTATAAATAATCTTATTATTGTGTACATCTGATAGGGATATATGTTTTCTTCCTTCAAATATGCATAAATTTATCaaattttctttatataaatatgtgtcaACGTAACGAAGCATCAATGAAAACACAATTGAACACAATTTTGATGTAAGGATGCATATGTAACaaccatttctttctttcttttaatcttGAAGCTGAAGTGTCAAACAAAAGTTGAACATTGTCATTGTTGCTCGCTTGCTTTCGTTattaatacaaaagaaaaaataaacaaacttacaaaaatgcaaTATAgatattttcttgtaatttACCATCATGAAACAATAAGGTAGACAAATACGATGGAGTGCAAAAATTCAGAATggcataattacaaataaaaaaactctaaaacacaattttgcaTAATTACACAGTAGATAGATCTCATTGTTTTTATACAAGCATATTTCAACTAGTCTATTTGAGCTCTATAAAGTCTTGCATTTTCACTATGGTTTCTTTTAAGGCATTTCCTGATTTGAAGATGCGAAAACAACGTCTGTTATGTCGTAACTACTCAGCATCACGAGTGCATTTATTGACCAAaatcttttacatttctaaaatagttttctttatatatttttgcaaaaaacgAATAATCCTACCGtgaaatacagtatatttatttcaaacactaAACACACGGCAAAACTACACAAAGCCAAGCACTCAGTACATCTATTGAGCATAAATACCAATTCATCCACATACACAAGGCAACTAATGAAGCAATAAAATCGACGAAAAACATTGTATCTGAGTGGTAGTGGTTCACACGTGTGATGACAAAAATATTGCAACCATATAAAAGCCAGCATGTAAACATTCAGAAAACACAATGTTGTGACTGAAAATGGTCCATTTCAATCCGAAAGAAAAACGTAAAAGGTCTAAATACGTGCAAGTAACAATTTTGCATGGCTTTTCCACTTATTGCAGTTTGAGCCCAAAGAGTACGAACTACGGCGGCCATAATTTGGCAAGTTTGTAGGACACGGAAAACCAGTGTGAAGCGTTTCATAATCTGTCTCTCAGATCAACACACCATCACATTTCGGGCTGCTGAAGaaagcatgtgtttttgtgggTTTTGATGAGAAAGTTTTCATGCTTGTGGTTATCGATGCACAAACATTTCTTTAGCAGAGAGGGAGTTACAGTTCCTCATAGTCGCCCTCCTCTCTTTTTGCTGAGCCTTCTTCTCCAGCCAGAAAAGCTTCAAGATCATCGGTTTTCTTGCTTCgtgactttctttttctcttctccttTTCATCTGCAGTCACACCTGCCTCatctctttcctttttcttgtgtttgtgttttttcttgccGCTTTTGTCGT
>XM_043239069.1
TTTTACAACATTTAAGAGCAGTCCCTCCTTGCAGATTCAAAGAAATATCTGTTGTCCATCAGTCATCATGCATCTAATAACCACATTTCTGTTAATGATCCTAATAGGTCACGGCACATCTGAATATCTACAGCAACTCATCTGTCCCTATGGGAACAAGAATACAACTCTGAACAGGGTGTGGTGCAAAAGAGATACCCATGATGAAAACTGCTGTACGGGCTTCTCTTTCCAGAAAGGCATCAACGTTTTAGAGGAAGGCAACATAGTTGTGACAGATAATGGAAAGTCCTTTACCATCTCGGTGAAGAGACTCACGCAAGGAGATGGAGTCTACTGGTGTGGGTTCATGACTGCAAACAATATCATTGTTAAACTGGCCGAGAATTACTTTACTAACACCCCATTTAACTTCGTTTGGTCCATCTTCCGctggattttattcattttgctcCCGGTGACGACCATTTCAACCCACATTTATATAAACCGCAATCATAGAGATACGAAGATAACATAACAAATTACAGGAAGTCACACGCCAAAGAAAAGTGGCTGAAGAATGAGGCAATCATCTGCCAGTAAATGTAAACGTAGTTCGTTATTTTAACTCATGGTAATATTTTTAGTACAAAAATGCTCAGTGACAACAACAGCATGACAATattatgtttcatttgttttgtaacaaCAGCGTAAAGTTTGGCGTTTATAAATAATCTTATTATTGTGTACATCTGATAGGGATATATGTTTTCTTCCTTCAAATATGCATAAATTTATCaaattttctttatataaatatgtgtcaACGTAACGAAGCATCAATGAAAACACAATTGAACACAATTTTGATGTAAGGATGCATATGTAACaaccatttctttctttcttttaatcttGAAGCTGAAGTGTCAAACAAAAGTTGAACATTGTCATTGTTGCTCGCTTGCTTTCGTTattaatacaaaagaaaaaataaacaaacttacaaaaatgcaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106585141 isoform X1

GO:

id name namespace
GO:0006955 immune response biological_process

KEGG:

id description
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU51316 True 2093 TUCP 0.36 6 9796390 9799358
XM_043239069.1 False 1002 mRNA 0.36 5 9796381 9798127

Neighbor

gene id symbol gene type direction distance location
zgc:64051 NA coding upstream 16493 9776630 ~ 9779888 (+)
lman2lb LOC107709866,LOC107673435,LOC107595003,LOC107672798,LOC107592340 coding upstream 23896 9768255 ~ 9772485 (+)
htra4 htra4,LOC107750178,LOC107672779,LOC108434275 coding upstream 45938 9741151 ~ 9750443 (+)
drd7 drd7,LOC107709833,LOC107594998,LOC107673378,LOC107721546,LOC107659284 coding upstream 234749 9559613 ~ 9561632 (+)
tcima zgc:110340,LOC107587466,LOC107594995,LOC107709856,LOC107673427,LOC107656486 coding upstream 394721 9400659 ~ 9401660 (+)
ccdc117 LOC107673415,LOC107709873,LOC107595009,LOC107750174,LOC107672783,LOC107592335 coding downstream 13838 9813196 ~ 9816869 (+)
rnf181 rnf181,LOC107595010,LOC107750183,LOC107672715,LOC107592411 coding downstream 29759 9829117 ~ 9831937 (+)
arvcfb arvcfb,LOC107595013,LOC107744414,LOC107673389,LOC107672748 coding downstream 64272 9863630 ~ 10028037 (+)
erap1b erap1b,LOC107752503,LOC107744480,LOC107673365,LOC107592380 coding downstream 235595 10034953 ~ 10042310 (+)
rad17 rad17,LOC107672793,LOC107673420,LOC107595018,LOC107592326,LOC107752497 coding downstream 261056 10060414 ~ 10065563 (+)
G34842 NA non-coding upstream 28560 9767294 ~ 9767821 (+)
G34841 NA non-coding upstream 30032 9765970 ~ 9766349 (+)
G34840 NA non-coding upstream 31034 9765136 ~ 9765347 (+)
G34747 LOC105896809,LOC106958509,LOC107671222,LOC107690788 non-coding upstream 230474 9478605 ~ 9565907 (+)
G34725 NA non-coding upstream 362874 9360859 ~ 9433507 (+)
G34861 LOC107709872,LOC107595007,LOC107673413 non-coding downstream 9091 9808449 ~ 9810850 (+)
G34905 NA non-coding downstream 208689 10008047 ~ 10028821 (+)
G34911 NA non-coding downstream 233081 10032439 ~ 10033955 (+)
G34941 NA non-coding downstream 303527 10102885 ~ 10106441 (+)
G34957 abhd17b,LOC102776450,LOC107592319,LOC107672759 non-coding downstream 462254 10261612 ~ 10264441 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other upstream 924863 8864202 ~ 8871518 (+)
snx19a snx19a,LOC107597619,LOC107681657 other upstream 1490935 8289720 ~ 8305446 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other upstream 1785782 8001578 ~ 8010599 (+)
p2rx1 p2rx1,LOC107598068,LOC107712377,LOC107664512,LOC107587372 other upstream 1998413 7754074 ~ 7797968 (+)
dpm2 dpm2,LOC107664400,LOC107712384,LOC107681851,LOC107598396,LOC107587395 other upstream 2121745 7672827 ~ 7674636 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other downstream 264859 10064217 ~ 10139733 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other downstream 918173 10717531 ~ 10736059 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other downstream 1127465 10926823 ~ 10933753 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other downstream 1247121 11046479 ~ 11064446 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other downstream 1336865 11136223 ~ 11150225 (+)

Expression


Co-expression Network