G35040


Basic Information

Item Value
gene id G35040
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10325866 ~ 10326714 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU51629
ctggtgtgcatcttaagacaaaacaaaggcacagaCATCTTTTAAGATCAGTGAGTGCAAGCttctttcagttgaaaaagttcatatttacatttaatcaaagaCTAGGTTCAAGCCTTGCCTGTGAAACTGTGCTGTCATTAACTTTTTAAGTTCTCACATGAGTGAGGTGAGAGTTTCGTCCAGGTTGCAGTCAGAGGGAGAGATGTTGAGGAACATGAGGGTCTTGGCATTGCCGCCCAGCGAGTCCTGCATGAGCTGGGTCAGCTTGTTGTTGCGATAGGGCACATGAGGCTGCTCCATTGACAGAGCTGAAATTACATCTCCAAGGGCACTCAGAGATTTGTTAATAGAGTTTGCCTCCTGGggaaaaacatacacaaaatgtgGGACAAACTGATTGTTGTGAGAGGCGTTAGAAAAAGTCCAAGACAGAAGTTGGGagtgaataaaaaagaataattaagaaaatgtcTTTGCCTTAGCAAAATATGTTAAGAAAATAGCAGAAAAACTTttcaaagtaaacatttttaaatgacaaaacaacagtCAAGCATTTGGACACTTTCTGATTCTCAaactttgtaaaacattttaataatcatgttCGGGTTGACGCgaagtgtccaaatactttcTGGGACCACTTTAAAtcagcttttatattttatttgttccgAACAACCTTCAGCTGGTCATCTTTGGCACCAGTTTTTGCTGCTCGTTCACTTCCAGCCAGGTCCACCAGACTGAGCTTCCCGAAACTCACGCTCCCATTGGTCAGGTTCCGGCTCTCAATCATGATGCCAATGATCAGGTGAGAACGGGAGCTCTCTACATTCATCT

Function

GO:

id name namespace
GO:0048732 gland development biological_process
GO:0009063 cellular amino acid catabolic process biological_process
GO:0009078 pyruvate family amino acid metabolic process biological_process
GO:0009080 pyruvate family amino acid catabolic process biological_process
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901606 alpha-amino acid catabolic process biological_process
GO:0046395 carboxylic acid catabolic process biological_process
GO:0042851 L-alanine metabolic process biological_process
GO:0042853 L-alanine catabolic process biological_process
GO:0061008 hepaticobiliary system development biological_process
GO:0044282 small molecule catabolic process biological_process
GO:0001889 liver development biological_process
GO:0006520 cellular amino acid metabolic process biological_process
GO:0006522 alanine metabolic process biological_process
GO:0006524 alanine catabolic process biological_process
GO:0016054 organic acid catabolic process biological_process
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU51629 True 849 lncRNA 0.41 1 10325866 10326714

Neighbor

gene id symbol gene type direction distance location
LOC122346143 cyp1d1,LOC107599971,LOC107673361 coding upstream 1231 10319660 ~ 10324635 (+)
tmc2b tmc2b,LOC107744486,LOC108255389,LOC108434469,LOC103356627 coding upstream 7262 10309609 ~ 10318604 (+)
tmc1 tmc1,LOC107672717,LOC107738298,LOC107592401,LOC107599958,LOC107744426 coding upstream 19173 10297132 ~ 10306693 (+)
gda gda,LOC107673426,LOC107672768 coding upstream 43837 10276867 ~ 10282029 (+)
c5h9orf85 zgc:101016,LOC107599915,LOC107744485,LOC107673354,LOC103371459,LOC101078288 coding upstream 50669 10273023 ~ 10275197 (+)
anxa1a LOC107744429,LOC107599917,LOC107673431,LOC107738289,LOC107592317,LOC107672753 coding downstream 10509 10337223 ~ 10341120 (+)
mfsd3 si:dkey-229d2.4,mfsd3,LOC107744428,LOC107672752,LOC107673419,LOC107599916,LOC107592373 coding downstream 15483 10342197 ~ 10361067 (+)
rorb rorb,LOC107744430,LOC107730723,LOC107599920,LOC107592316 coding downstream 81921 10408635 ~ 10433693 (+)
abca2 abca2,LOC107730718 coding downstream 142962 10469676 ~ 10524790 (+)
dph7 dph7,LOC107730721,LOC107672791,LOC107744432 coding downstream 200376 10527090 ~ 10531080 (+)
G34959 NA non-coding upstream 34005 10288424 ~ 10291861 (+)
G34956 LOC107672769,LOC107592318,LOC107599914,LOC107738291,LOC107673406 non-coding upstream 38493 10285767 ~ 10287373 (+)
G34957 abhd17b,LOC102776450,LOC107592319,LOC107672759 non-coding upstream 61425 10261612 ~ 10264441 (+)
G34941 NA non-coding upstream 219425 10102885 ~ 10106441 (+)
G34911 NA non-coding upstream 291911 10032439 ~ 10033955 (+)
G35041 NA non-coding downstream 317 10327031 ~ 10327461 (+)
G35042 NA non-coding downstream 3175 10329889 ~ 10330322 (+)
G35043 NA non-coding downstream 6505 10333219 ~ 10333808 (+)
G35081 NA non-coding downstream 220507 10547221 ~ 10547625 (+)
G35197 NA non-coding downstream 486743 10813457 ~ 10816301 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other upstream 186133 10064217 ~ 10139733 (+)
si:ch211-102c2.4 NA other upstream 526508 9796381 ~ 9799358 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other upstream 1454348 8864202 ~ 8871518 (+)
snx19a snx19a,LOC107597619,LOC107681657 other upstream 2020420 8289720 ~ 8305446 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other upstream 2315267 8001578 ~ 8010599 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other downstream 390817 10717531 ~ 10736059 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other downstream 600109 10926823 ~ 10933753 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other downstream 719765 11046479 ~ 11064446 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other downstream 809509 11136223 ~ 11150225 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other downstream 939928 11266642 ~ 11303431 (+)

Expression


Co-expression Network