G35267


Basic Information

Item Value
gene id G35267
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11187254 ~ 11187694 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU51930
TATTGATAGATATTTTCATTAGTTGTTGTTTGGAATTTGAGATGTGCAAATTGAGCAGGGACAGTTACAGGTTTAAGTACAATCATTTATTGGAGAAGCATACAGCCCCAGAGAGTCAGCAAATTGGAGTTAgggtattttaattaaattaaaggtaaatagtactactactactaataataataataataataatattaataaaccgTATGCatgacttgtttaaaaaaaaaaaaaaaacatttagaaaatatggtGCATTTTCATCTTGTGTTAGTTTAAAGCAGAGGTTGTAGTCTCTTACTGGTCATAAAgcatttcaaaatgcaaaatactgTTTCAAAACTTTGGATACCACCTTGTTGgccatttgtaaatgtaataagcCTGGATTCATTAAACTGGGTGTTGTCTGCTTCAAGCTATTTTTATCTGTACAAT

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU51930 True 441 lncRNA 0.30 1 11187254 11187694

Neighbor

gene id symbol gene type direction distance location
tbc1d8b tbc1d8b,si:dkey-110k5.6 coding upstream 580 11170213 ~ 11186674 (+)
rnf128a rnf128a,LOC107592278,LOC107687662,LOC107732618,LOC107680400,LOC107747815 coding upstream 17702 11154539 ~ 11169552 (+)
LOC122346179 LOC107747816,LOC107597221,LOC107687664,LOC107592359,LOC107732598 coding upstream 51169 11127127 ~ 11136085 (+)
LOC122345519 LOC107747818,LOC107687663,LOC107599955,LOC107680407,LOC107726394 coding upstream 62905 11109781 ~ 11124349 (+)
LOC122345703 LOC107687703,LOC107599954,LOC107672740,LOC107747828,LOC107592360,LOC107599982,LOC107687702,LOC107747827 coding upstream 87917 11073890 ~ 11099337 (+)
mtmr2 mtmr2,LOC107747813,LOC107597225,LOC107592277,LOC107732604,LOC107680397,LOC107687656 coding downstream 10517 11198211 ~ 11204226 (+)
fam76b fam76b,LOC107680374,LOC107597227,LOC107687655,LOC107592275 coding downstream 22682 11210376 ~ 11217745 (+)
cwc15 cwc15,LOC107597228,LOC107592276,LOC107732607,LOC107747811 coding downstream 30829 11218523 ~ 11222820 (+)
acsl4b acsl4b,LOC107747809,LOC107687654,LOC107597230,LOC107732603,LOC107680372,LOC107592357 coding downstream 36260 11223954 ~ 11232994 (+)
stag2a stag2a,LOC107680370,LOC107732619,LOC107597229,LOC107687653,LOC107592356 coding downstream 45713 11233407 ~ 11249164 (+)
G35229 NA non-coding upstream 168062 10945056 ~ 11019192 (+)
G35202 NA non-coding upstream 348887 10838012 ~ 10838367 (+)
G35197 NA non-coding upstream 370953 10813457 ~ 10816301 (+)
G35081 NA non-coding upstream 639629 10547221 ~ 10547625 (+)
G35043 NA non-coding upstream 853446 10333219 ~ 10333808 (+)
G35274 kat5,LOC106563454,LOC107597226 non-coding downstream 16806 11204500 ~ 11209405 (+)
G35304 prps1a,LOC103031347,LOC107733231,LOC107597240,LOC107672505 non-coding downstream 194976 11382670 ~ 11387170 (+)
G35309 NA non-coding downstream 217834 11405528 ~ 11405761 (+)
G35311 NA non-coding downstream 226347 11414041 ~ 11414688 (+)
G35322 NA non-coding downstream 253845 11441539 ~ 11442411 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other upstream 37029 11136223 ~ 11150225 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other upstream 122808 11046479 ~ 11064446 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other upstream 253501 10926823 ~ 10933753 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other upstream 451195 10717531 ~ 10736059 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other upstream 1047521 10064217 ~ 10139733 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other downstream 78948 11266642 ~ 11303431 (+)
glra4b glra4b,LOC107741187,LOC107565418,LOC107680382,LOC108442052,LOC108259905 other downstream 450822 11638516 ~ 11652683 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other downstream 736534 11924228 ~ 11943110 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other downstream 1061444 12249138 ~ 12255672 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other downstream 1326319 12514013 ~ 12528790 (+)

Expression


Co-expression Network