G36746


Basic Information

Item Value
gene id G36746
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15174397 ~ 15176947 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU54153
ggcaaatctgaatttaatGAACATAAACAGATACATAAGCTACTATTTCCATAACTTGTAAAAAGCCAAAACCTTGATCCGTTCGCAAAAtaaggaaaaagtaaaaatgtactaCAGAAAATATTTGGCCTCCATGTTGCTGTGGCATTATTTAcactatatacagtattttcatATATGACAGTACTGTCATGTTTGCCATTAAATCCTTATCGATAAGGCACCAAATGCTAAGTAGcatgatcctttttttttttaccaaattgtgcggaaaatgtacaaaactatACAAATAGACCTATCACATATGAACATTGTCCATCACaatggaaaaatataaacaaataaaaataagctgcTGTTAGTTGCAACAGTTATGAGTGTACATGCATGTAGGAACTACCCCATCTTaaaagatatttgaaaaatatctttgaaagatatttaaacaatttattaactGATTGTAGACTTGAAAGAATAATCAATATAATTAATCTGATTACCACATTTTTtagtaatgacagaattgacaATGCATAATGATTATGtaaactttaaatttaatgtaataagcTGTTGCCATTCAATTCAAACTATAATGTCAATGGTCAAATGGAATATATTGCAGGTGAACATTATGTGAATTTACCAGTATTTCAGAGCCCcatggaaaaatacaaaatacttttcTGCACACAAAATAATCAATACCACATATTTAATGTGcccatattttaataaaacccaTAATTCGGCCCataagtgagaaaaaaaacgttGCGGTGCTACATCTTGACTTAAAAGTTGCTTTTAgacatagtattttttttatacaatttaattttaaccaaaCGTGTTACCTTTATGCACATATTCCTAATACCTATATTGGGTGATCATtctcaaacaaaaaagatttagtGATTTCAATGATCGAACAATTTAATGTTTCGAAAGTAAAGTTAACAACCACACAGGTGTCTAAACATCACTATAAAGAATTCCAAAAATTGAACAGAAAACTCACacatttgaactttctgttaATACATTACAATGTATAAACAACAAGCAGCAAACACTTATTCTGCCTTAAAATCACCTTACAAAAAAGATTTATACTGAAGTATTCAAAGACATTTTACAATTGGGTGCCGATTTTTGTCCATTATCAAAATATCTGAAAACGTGAGGAAAGCAGCATGCATCTTATGTTTAGTTGTCGCTGCCGAATATATAAAGtcttttagggtttttttgtatttttaaatcgtgtttttttttttcatagttgGTATAGTCACTCATAAATGAAAACGTAACAGCGATACTGTCCGTTTAAAATGACGGTGTTAATGAAGTGGCAGGTTCGGTACATCTGGGCAAATTCTAAACTGAGGCCTTTAGAAATTGTAAACCGACGGCTACTTTTTTAAGTAGCAGAAAATATTAGCTGTAGCACagggattttgtttttaaaactccACTTGTCGAAGCTCTCCATCAGCTGTAAATGCAGTCAACATCAGGAGTTGCTTGCTTGTGTTCAGCActgtcaaacaataaatatgtcCGTCTCTCAAAAGGCATTTAAGATTATATGGAAGTTTGAAACAGCtatcatacattaaaaaaaataaagtgcatataCAGTAGACACCTTTTGTATACACAAATTAATGTACTTTAACAAGTACAACTCTTAGTAAACAAGGTCAGATGGCGCATATCCTCACAGGAATATTGTATTTTCTCCAGGAAAGTCTCAAAATACTGTATTCTTCAAAGAGTTtcattttttgtattctttacaaaaaataagtaGTCTATCAGCTGAGCTGAGAGACATACCATGCTCTTTCAAAATGTACCTTGTATTTATAAACTTAGCAAAATGGTAATAGTTTGAATAGCCAgtgtaaatatgcatgtatcCCAGGGGAACAGTAGAAATAGTGTATTCTGAAGATTGCGAATAtacttgttgttgttttttgtgtgtgtgtgtatttgtggttACCAAAAATACATGTGGTATTGGCCTCCTACGCTCAAATGTCCAGCTTTGGGAAAGAGGTCAAGGCAGCGGTATTGTGTTCAAACTCTTTCATCCAGTAGCCGTTTGATTGCCGATGACTCGCAGGATCTCCCTGTGAATGCCAGGGTCCTGTGTGTTTATACTTGTGTCACCTACCTGTCCgtcttcttacacaaagaaaaagcGTGTGCAGACATGATCTGTATTTGGAACCACCCAGATGTCCCCATGCTTGTGCAGGTCTGGAGATGTAATAACTGTTATGTGCATACAAAAAGAAGTGATTATTAACATGATAAAGATTGCAGATGATTGTATAAtcttaattgtataattgtgtACCTTCACATAAGGCTATGCATTTCAGATTGCGGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54153 True 2418 lncRNA 0.33 2 15174397 15176947

Neighbor

gene id symbol gene type direction distance location
si:dkey-3h3.3 LOC107681178 coding upstream 560 15171061 ~ 15173837 (+)
ndufs4 ndufs4,LOC107708631,LOC107661235,LOC107602025,LOC107599174,LOC107746797 coding upstream 157644 15006607 ~ 15016753 (+)
arl15a arl15a,LOC107599176,LOC107681238,LOC107746795,LOC107661232,LOC107602028,LOC107708616 coding upstream 174980 14921572 ~ 14999417 (+)
cspg4ba si:dkey-193c22.2,LOC107746793,LOC107681276,LOC107744873,LOC107599179,LOC107602029 coding upstream 275572 14880875 ~ 14898825 (+)
tmem175 LOC107746789,LOC107663387,LOC107599180,LOC107661229,LOC107744865,LOC107602030 coding upstream 379738 14790866 ~ 14794659 (+)
sub1b sub1b,sub1,LOC107552599,LOC107602008,LOC107746806,LOC107661272 coding downstream 131892 15308839 ~ 15311666 (+)
arid3c arid3c,LOC107708619,LOC107681123,LOC107601998,LOC107746872,LOC103046366,LOC107552548 coding downstream 197190 15374137 ~ 15434869 (+)
pias2 LOC107681092,LOC107746809,LOC107676652 coding downstream 267419 15444366 ~ 15450522 (+)
fancg fancg,LOC107552563,LOC107746873,LOC107602006,LOC107708626,LOC107681392 coding downstream 280405 15457352 ~ 15462955 (+)
LOC122345300 vcp,LOC107681079,LOC107708640,LOC103357444 coding downstream 286487 15463434 ~ 15471417 (+)
G36744 NA non-coding upstream 4791 15169294 ~ 15169606 (+)
G36743 NA non-coding upstream 10530 15163638 ~ 15163867 (+)
G36742 NA non-coding upstream 13688 15160297 ~ 15160709 (+)
G36737 LOC107661270 non-coding upstream 46219 15126986 ~ 15128178 (+)
G36732 NA non-coding upstream 145264 15028857 ~ 15029133 (+)
G36739 NA non-coding downstream 18581 15195528 ~ 15207426 (+)
G36762 NA non-coding downstream 98710 15275657 ~ 15295556 (+)
G36765 NA non-coding downstream 118757 15295704 ~ 15300356 (+)
G36793 NA non-coding downstream 150152 15327099 ~ 15342864 (+)
G36830 eef2l2,LOC108414462,LOC107708620,LOC107676651,LOC108255789,LOC107681082,LOC107746808,LOC107552597,LOC107601997,LOC107708638 non-coding downstream 277533 15454480 ~ 15477032 (+)
G36640 NA other upstream 453910 14718532 ~ 14720487 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other upstream 521486 14645945 ~ 14652911 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 824406 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 836632 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 869093 14300043 ~ 14305304 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 1214850 16391797 ~ 16395562 (+)
G37227 NA other downstream 1297761 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 1309673 16486620 ~ 16561741 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other downstream 2187902 17364849 ~ 17372859 (+)
LOC122345691 NA other downstream 2349077 17526024 ~ 17527444 (+)

Expression


Co-expression Network