G36847


Basic Information

Item Value
gene id G36847
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15494658 ~ 15494950 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU54300
GAAATGTAAATGATTGAGTGACTCAGAACCTCCCACAGGTGACAACTTAAGTGCAGTGACTTCAGTCATTTAACCCTTTATGTGCAGCATGAGAACTTGGCACAGAGTTaaatacttgtttttattagtatCTAATTGCAAGGTGTAACGGTAGTTAAAGATATAACACTAGTCACAAGCACATTTTCTGTCATGTTATAGACCCGGCCAGTCCAGGACTCCCCTAAAGGAGCCACATCATCCAGAAATCCCCCCTAACCTACTGCTATAAGCATCTTCATGGTAACTGGCCC

Function

GO:

id name namespace
GO:0046982 protein heterodimerization activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
ko05203 Viral carcinogenesis
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

RNA

RNA id representative length rna type GC content exon number start site end site
TU54300 True 293 lncRNA 0.42 1 15494658 15494950

Neighbor

gene id symbol gene type direction distance location
LOC122345300 vcp,LOC107681079,LOC107708640,LOC103357444 coding upstream 23241 15463434 ~ 15471417 (+)
fancg fancg,LOC107552563,LOC107746873,LOC107602006,LOC107708626,LOC107681392 coding upstream 31703 15457352 ~ 15462955 (+)
pias2 LOC107681092,LOC107746809,LOC107676652 coding upstream 44136 15444366 ~ 15450522 (+)
arid3c arid3c,LOC107708619,LOC107681123,LOC107601998,LOC107746872,LOC103046366,LOC107552548 coding upstream 59789 15374137 ~ 15434869 (+)
sub1b sub1b,sub1,LOC107552599,LOC107602008,LOC107746806,LOC107661272 coding upstream 182992 15308839 ~ 15311666 (+)
LOC122344704 NA coding downstream 5552 15500502 ~ 15504606 (+)
cfap251 LOC107746856,LOC107681387,LOC107577995 coding downstream 60972 15555922 ~ 15563758 (+)
bcl7a LOC107552594,LOC107746817,LOC107680981,LOC107708648,LOC107553587,LOC107676671 coding downstream 69196 15564146 ~ 15568246 (+)
pigl pigl,LOC107746821,LOC107680910,LOC107552588,LOC107718344,LOC107676669,LOC107575753 coding downstream 189853 15684803 ~ 15705172 (+)
ubb ubb,UBC,LOC107553588 coding downstream 215029 15709979 ~ 15712715 (+)
G36830 eef2l2,LOC108414462,LOC107708620,LOC107676651,LOC108255789,LOC107681082,LOC107746808,LOC107552597,LOC107601997,LOC107708638 non-coding upstream 17626 15454480 ~ 15477032 (+)
G36793 NA non-coding upstream 151794 15327099 ~ 15342864 (+)
G36765 NA non-coding upstream 194302 15295704 ~ 15300356 (+)
G36762 NA non-coding upstream 199102 15275657 ~ 15295556 (+)
G36739 NA non-coding upstream 287232 15195528 ~ 15207426 (+)
G36852 NA non-coding downstream 10224 15505174 ~ 15505753 (+)
G36926 NA non-coding downstream 83168 15578118 ~ 15583662 (+)
G36918 LOC107746818,LOC107680961,LOC107552589 non-coding downstream 100498 15595448 ~ 15600161 (+)
G36937 LOC107680951,LOC107553567,LOC107746860,LOC107552540,LOC107718342,LOC107676644 non-coding downstream 126875 15621825 ~ 15623293 (+)
G36948 NA non-coding downstream 148345 15643295 ~ 15647107 (+)
G36640 NA other upstream 774171 14718532 ~ 14720487 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other upstream 841747 14645945 ~ 14652911 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 1144667 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 1156893 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 1189354 14300043 ~ 14305304 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 896847 16391797 ~ 16395562 (+)
G37227 NA other downstream 979758 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 991670 16486620 ~ 16561741 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other downstream 1869899 17364849 ~ 17372859 (+)
LOC122345691 NA other downstream 2031074 17526024 ~ 17527444 (+)

Expression


Co-expression Network