G36918 (LOC107746818,LOC107680961,LOC107552589)


Basic Information

Item Value
gene id G36918
gene name LOC107746818,LOC107680961,LOC107552589
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15595448 ~ 15600161 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU54414
GCTACATAGTAGTTATTGTTAAACCTAAAGTATGCAGTAACTTACGACAGAATGTTTTATTCCTCCAGATGTTGATTGATGTTCCAATCTCTTGACAGCTGGCAACATACCTTTGTATATGGCTACAATGAACTGTCTTGTCATTTGGTTGGGCTGCAACATCTTTGAcacattcatcaaagaatttctGAGGTGgaattttttcaaaacaaccAGAAAATGGTCCCTTCTCTGAGATTAGCATACTGCAAACTGTCTCCGCCTCTTTCTGTTTGTCTTTATCAGGATTTAAGCACTTGGAGCCACAGCTTGTTTGACACATCATTTTGTCTGATGGTGAAACCCAGGCATCTGCAAAATCTACCACGGAAATTGCCTGTATACCACCAGACAAAAGAAAATCATCTGCACTGTTTCCATTGTAGTTACCACAGAGAcctttgactgtatttttaaaagtggatGGGATCTCGATTTTGACCATGGAAATAGTATCATATGTCAGCTTCAATCCAAAGTTTGTTTCCACAACAATGTTAACACCGCTCTGATAGACTTGTACAAGTCTTTCATTTAGAGAAGCTGGGAGACTGGTTTGAACTTTGTccacctgtaaaaaaaacaacaccaccacAATACATTGTAGGTAGTGGTTTTTGATCTCCTAAAACTGTGGTCAGTAATCGGTACATTACCTGAACTTCCCAGATGTGACCAGGCAGCAAAGTAATTGTGGACTgttctatttgtatttcaacTCTTCGGGTTAAGACAATCTCAGAGGAGGACAGCTGTTTCACTAACACACTGAAAGAGTTCTTCTTATTGTTGCTCTCAGCCGTCTCTGCCAATCTATACTCACAGTCTCCTTCAACACTAAAGGATTTCCCATCAAATGACTGATAAAGCCCAAAGCCTGACACTGAGCAAACTGCTTTGCCATCAGGGAAACAGCCCTGAACTCCATTCAGGACCTGGCAGTTCTCGTTTGGTTTGCAGGAGAATCCATCATCACACTGAACTCTTCCGTTCTCTTTGCACACACATCTCTGCTTGCACTTGTCTTGTGGGAAGAACTCCTGGCCCAGCTGGTAGTAATGACCCTCATAAGAACAGCCACATCGTTCCATAGCTACACATTGACCATTGCTCAGGACAAAGCCTTCATCACATATACAGCCTTCAATACAAGGAATGCCTTCACATGCTTTGGGCTCAGTGAGGCCATGACAGGTCTGGGAACATCCTGTTTCACAAACTTCATAGTGACTGTTATCCATACAAGATGCA

Function

NR:

description
PREDICTED: IgGFc-binding protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54414 True 1290 lncRNA 0.42 2 15595448 15600161

Neighbor

gene id symbol gene type direction distance location
bcl7a LOC107552594,LOC107746817,LOC107680981,LOC107708648,LOC107553587,LOC107676671 coding upstream 27202 15564146 ~ 15568246 (+)
cfap251 LOC107746856,LOC107681387,LOC107577995 coding upstream 31690 15555922 ~ 15563758 (+)
LOC122344704 NA coding upstream 90842 15500502 ~ 15504606 (+)
LOC122345300 vcp,LOC107681079,LOC107708640,LOC103357444 coding upstream 124031 15463434 ~ 15471417 (+)
fancg fancg,LOC107552563,LOC107746873,LOC107602006,LOC107708626,LOC107681392 coding upstream 132493 15457352 ~ 15462955 (+)
pigl pigl,LOC107746821,LOC107680910,LOC107552588,LOC107718344,LOC107676669,LOC107575753 coding downstream 84642 15684803 ~ 15705172 (+)
ubb ubb,UBC,LOC107553588 coding downstream 109818 15709979 ~ 15712715 (+)
p2rx5 LOC107680863,LOC107746824,LOC107552584,LOC107676654,LOC107718329,LOC107553591 coding downstream 117705 15717866 ~ 15726181 (+)
shpk shpk,LOC107680869,LOC107553593,LOC107718345,LOC107736096 coding downstream 128270 15728431 ~ 15732835 (+)
LOC122344749 LOC107680837,LOC107552580,LOC107746822,LOC107680853,LOC107552581,LOC107746861,LOC107718347,LOC107676666 coding downstream 133775 15733936 ~ 15755185 (+)
G36926 NA non-coding upstream 11786 15578118 ~ 15583662 (+)
G36852 NA non-coding upstream 89695 15505174 ~ 15505753 (+)
G36847 NA non-coding upstream 100498 15494658 ~ 15494950 (+)
G36830 eef2l2,LOC108414462,LOC107708620,LOC107676651,LOC108255789,LOC107681082,LOC107746808,LOC107552597,LOC107601997,LOC107708638 non-coding upstream 118416 15454480 ~ 15477032 (+)
G36793 NA non-coding upstream 252584 15327099 ~ 15342864 (+)
G36937 LOC107680951,LOC107553567,LOC107746860,LOC107552540,LOC107718342,LOC107676644 non-coding downstream 21664 15621825 ~ 15623293 (+)
G36948 NA non-coding downstream 43134 15643295 ~ 15647107 (+)
G36984 NA non-coding downstream 112816 15712977 ~ 15713194 (+)
G37023 NA non-coding downstream 212942 15813103 ~ 15814248 (+)
G37024 NA non-coding downstream 214692 15814853 ~ 15815065 (+)
G36640 NA other upstream 874961 14718532 ~ 14720487 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other upstream 942537 14645945 ~ 14652911 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 1245457 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 1257683 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 1290144 14300043 ~ 14305304 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 791636 16391797 ~ 16395562 (+)
G37227 NA other downstream 874547 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 886459 16486620 ~ 16561741 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other downstream 1764688 17364849 ~ 17372859 (+)
LOC122345691 NA other downstream 1925863 17526024 ~ 17527444 (+)

Expression


Co-expression Network