G36937 (LOC107680951,LOC107553567,LOC107746860,LOC107552540,LOC107718342,LOC107676644)


Basic Information

Item Value
gene id G36937
gene name LOC107680951,LOC107553567,LOC107746860,LOC107552540,LOC107718342,LOC107676644
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15621825 ~ 15623293 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU54436
CGTTCTTCTCTTCTCTTAGGGCTGGAGAGTTAGCTGGGCTGATCACCTCAATTCCACCCTGAGCATCATAACGACTGGATGACACTGAAAAACTGCTGCTGGAGGAGTCTGAGCTCTGTGAGCCTCTCTCACGGGAGTCCTTATCTGGGGCAATCTGGCGCGTGATGATGACATCAATAAAGTTTGCAGCCGTTATGGTGGTCTTCCCATGTGTACGTAGCTCCTCCTCCATGCGTGACTTGGCTTGACTGGCTTTCTCTTTGCTCCCCGCAGCTCCTCCACCCTCTGCATACACAGGATGGGAAGGTTTCCCACTAGGAAGTGACACGTCCCCATATGGTGACTGCATGGAACGGCGCTCCATCTCTTGTGCCTCCTGCGCTGCCCGTCGTGATGTCATCATGTCATCATCCCGGGAGCTACTGTTATTATGCTTGCCCTCCTTGACTTTCCCAACATCCATCTGCGGGGCAGAGACAGCAGCATCTACCAGAGCAGCGAGGGCGTCAGCTGCATTGTTGTATCGGCTGGCTTGAGCTGCAGCTGCTTGTGAGGGCATTT

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: nuclear receptor corepressor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54436 True 561 lncRNA 0.54 2 15621825 15623293

Neighbor

gene id symbol gene type direction distance location
bcl7a LOC107552594,LOC107746817,LOC107680981,LOC107708648,LOC107553587,LOC107676671 coding upstream 53579 15564146 ~ 15568246 (+)
cfap251 LOC107746856,LOC107681387,LOC107577995 coding upstream 58067 15555922 ~ 15563758 (+)
LOC122344704 NA coding upstream 117219 15500502 ~ 15504606 (+)
LOC122345300 vcp,LOC107681079,LOC107708640,LOC103357444 coding upstream 150408 15463434 ~ 15471417 (+)
fancg fancg,LOC107552563,LOC107746873,LOC107602006,LOC107708626,LOC107681392 coding upstream 158870 15457352 ~ 15462955 (+)
pigl pigl,LOC107746821,LOC107680910,LOC107552588,LOC107718344,LOC107676669,LOC107575753 coding downstream 61510 15684803 ~ 15705172 (+)
ubb ubb,UBC,LOC107553588 coding downstream 86686 15709979 ~ 15712715 (+)
p2rx5 LOC107680863,LOC107746824,LOC107552584,LOC107676654,LOC107718329,LOC107553591 coding downstream 94573 15717866 ~ 15726181 (+)
shpk shpk,LOC107680869,LOC107553593,LOC107718345,LOC107736096 coding downstream 105138 15728431 ~ 15732835 (+)
LOC122344749 LOC107680837,LOC107552580,LOC107746822,LOC107680853,LOC107552581,LOC107746861,LOC107718347,LOC107676666 coding downstream 110643 15733936 ~ 15755185 (+)
G36918 LOC107746818,LOC107680961,LOC107552589 non-coding upstream 21664 15595448 ~ 15600161 (+)
G36926 NA non-coding upstream 38163 15578118 ~ 15583662 (+)
G36852 NA non-coding upstream 116072 15505174 ~ 15505753 (+)
G36847 NA non-coding upstream 126875 15494658 ~ 15494950 (+)
G36830 eef2l2,LOC108414462,LOC107708620,LOC107676651,LOC108255789,LOC107681082,LOC107746808,LOC107552597,LOC107601997,LOC107708638 non-coding upstream 144793 15454480 ~ 15477032 (+)
G36948 NA non-coding downstream 20002 15643295 ~ 15647107 (+)
G36984 NA non-coding downstream 89684 15712977 ~ 15713194 (+)
G37023 NA non-coding downstream 189810 15813103 ~ 15814248 (+)
G37024 NA non-coding downstream 191560 15814853 ~ 15815065 (+)
G36993 NA non-coding downstream 198599 15821892 ~ 15823751 (+)
G36640 NA other upstream 901338 14718532 ~ 14720487 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other upstream 968914 14645945 ~ 14652911 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 1271834 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 1284060 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 1316521 14300043 ~ 14305304 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 768504 16391797 ~ 16395562 (+)
G37227 NA other downstream 851415 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 863327 16486620 ~ 16561741 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other downstream 1741556 17364849 ~ 17372859 (+)
LOC122345691 NA other downstream 1902731 17526024 ~ 17527444 (+)

Expression


Co-expression Network