G36984


Basic Information

Item Value
gene id G36984
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15712977 ~ 15713194 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU54542
ATAATTTCTTACTCCTACTTGGTGAGACGCTAGGGTGAAAATCGCTATAAATCTATTTAGGTGCAGTCCATAATGTGCCGCTGTAATGGCTGCTGCCATACATTAAAAAAGGGTAAGATGGTGCCACCAAGTGTCTGCTCTTGTAACCTTGATGAAATTCCAATAGCCTGAAGAAGTCGCTGACAAATTATATAAGCCTGTACACTGCATTGCTTATA

Function

GO:

id name namespace
GO:0009063 cellular amino acid catabolic process biological_process
GO:0009078 pyruvate family amino acid metabolic process biological_process
GO:0009080 pyruvate family amino acid catabolic process biological_process
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901606 alpha-amino acid catabolic process biological_process
GO:0046395 carboxylic acid catabolic process biological_process
GO:0042851 L-alanine metabolic process biological_process
GO:0042853 L-alanine catabolic process biological_process
GO:0044282 small molecule catabolic process biological_process
GO:0006522 alanine metabolic process biological_process
GO:0006524 alanine catabolic process biological_process
GO:0016054 organic acid catabolic process biological_process
GO:0005179 hormone activity molecular_function
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54542 True 218 lncRNA 0.40 1 15712977 15713194

Neighbor

gene id symbol gene type direction distance location
ubb ubb,UBC,LOC107553588 coding upstream 262 15709979 ~ 15712715 (+)
pigl pigl,LOC107746821,LOC107680910,LOC107552588,LOC107718344,LOC107676669,LOC107575753 coding upstream 7805 15684803 ~ 15705172 (+)
bcl7a LOC107552594,LOC107746817,LOC107680981,LOC107708648,LOC107553587,LOC107676671 coding upstream 144731 15564146 ~ 15568246 (+)
cfap251 LOC107746856,LOC107681387,LOC107577995 coding upstream 149219 15555922 ~ 15563758 (+)
LOC122344704 NA coding upstream 208371 15500502 ~ 15504606 (+)
p2rx5 LOC107680863,LOC107746824,LOC107552584,LOC107676654,LOC107718329,LOC107553591 coding downstream 4672 15717866 ~ 15726181 (+)
shpk shpk,LOC107680869,LOC107553593,LOC107718345,LOC107736096 coding downstream 15237 15728431 ~ 15732835 (+)
LOC122344749 LOC107680837,LOC107552580,LOC107746822,LOC107680853,LOC107552581,LOC107746861,LOC107718347,LOC107676666 coding downstream 20742 15733936 ~ 15755185 (+)
trpv1 LOC107680853,LOC107552581,LOC107680837,LOC107552580,LOC107746822,LOC107746861,LOC107676666 coding downstream 35773 15748967 ~ 15755185 (+)
eral1 LOC107553595,LOC107676670,LOC107746830,LOC107680814,LOC107718331,LOC107552539 coding downstream 94617 15807811 ~ 15812017 (+)
G36948 NA non-coding upstream 65870 15643295 ~ 15647107 (+)
G36937 LOC107680951,LOC107553567,LOC107746860,LOC107552540,LOC107718342,LOC107676644 non-coding upstream 89684 15621825 ~ 15623293 (+)
G36918 LOC107746818,LOC107680961,LOC107552589 non-coding upstream 112816 15595448 ~ 15600161 (+)
G36926 NA non-coding upstream 129315 15578118 ~ 15583662 (+)
G36852 NA non-coding upstream 207224 15505174 ~ 15505753 (+)
G37023 NA non-coding downstream 99909 15813103 ~ 15814248 (+)
G37024 NA non-coding downstream 101659 15814853 ~ 15815065 (+)
G36993 NA non-coding downstream 108698 15821892 ~ 15823751 (+)
G37038 NA non-coding downstream 146565 15859759 ~ 15860103 (+)
G37047 NA non-coding downstream 205312 15918506 ~ 15919285 (+)
G36640 NA other upstream 992490 14718532 ~ 14720487 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other upstream 1060066 14645945 ~ 14652911 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 1362986 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 1375212 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 1407673 14300043 ~ 14305304 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 678603 16391797 ~ 16395562 (+)
G37227 NA other downstream 761514 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 773426 16486620 ~ 16561741 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other downstream 1651655 17364849 ~ 17372859 (+)
LOC122345691 NA other downstream 1812830 17526024 ~ 17527444 (+)

Expression


Co-expression Network