G37475 (LOC107720216,LOC107575123,LOC107567414,LOC107756269,LOC107720179,LOC107699689)


Basic Information

Item Value
gene id G37475
gene name LOC107720216,LOC107575123,LOC107567414,LOC107756269,LOC107720179,LOC107699689
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 18038132 ~ 18044946 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU55299
AGTTCATACTGCACTTTTATAATTCTACAGTTTTCAATGGTGACAGTCAGGTCAGGAGGAAGGATCATGTCCAGTATGAATTTTGACTTTTCTCCAGAAGGGATGCGATCTCTGGTCTCTTTGACTATGTCCTTATGTCCTCTATTAGTGCTCCTGCCAGCGATGAACGTCTGTTGCTGCTTGAGGCTGTACTTTAGCTTGATGTCACGAGACGAAGAGTTGTCAATGTCAACAAAAACTCTGATTGTTTCACCTGcagaaattattacaattagagaaaacaataaaatcaaaaactaaataaaagaaagtgaCAGATTTCCATCCAAGTtgcaaatttaatttgtgtgaaaactATGTACAGATAAAGAACACGTGTATTTACATCTGGCAGAATTGAagtcaaattatttatatattagtctATAACATGTGATGCATGAAGCTCTGCTGTTATTTTCCTCTCCAAGGAAATTTAGTCCTAAGGCTTAAATAATGCAGATCAATCAGTCTATTCAGCAAATGTATTTTCCTCAAGTGagtgtatgtttttatgtgaaTTTGGGAAATCTGATTagcattttcttaattttttatgtagTATATTACAATGCGCATAGATATATGTTGATGGAAACCCGACAGCTGACACCGCAGGCCTTCAGTTTAGGCACTTCAGATGTTACATGTGACCTGATCACCTTGCACATAGCCAGTTTTTTCAGTTGTTACAGCCATTGACATTTTT
>TU55300
CGAAGAAAAGTGCTAAGCTTAAAAGGCACAATAATAGGCACTGAGCTTGCAGATAGAAGGCACGCAGACAACATTGTTTGGCTGGTGAAGGAGATTAATATGACACATCAGGAGATGATTTGCTTTGATTTGGATCATAGATTGGTGCAGAAGGAGCTGGATGGAAACCAGATTGAATGGGAATGGGATTTGGATTTGGATAGACCCCGGCAGCAGCTCCCGGATAGGGCAGCACTGAAGGATCATACAGATTGGGGTAAAGTCCTGCAGGTGGAGGAGGTTGTTCTCCAGGATAAGGCAGGTTAGGCTGAGGTGGTGGATATGGCTGGAATCCTTGCCACGGAGGACACTGTTGTTCAAAGGGAAGAATGACCACAGGAAATTTGACTTCTGGATCTGATGCAAAAGACACGTCCAGATAAACCTGAAAAACAatcatgtttttgctttactCTTCCATAGAAAGTCTTGTTAAGGGGaaacattgctttaaatatgGGAATAAATAGCACCTTAAGTTCATACTGCACTTTTATAATTCTACAGTTTTCAATGGTGACAGTCAGGTCAGGAGGAAGGATCATGTCCAGTATGAATTTTGACTTTTCTCCAGAAGGGATGCGATCTCTGGTCTCTTTGACTATGTCCTTATGTCCTCTATTAGTGCTCCTGCCAGCGATGAACGTCTGTTGCTGCTTGAGGCTGTACTTTAGCTTGATGTCACGAGACGAAGAGTTGTCAATGTCAACAAAAACTCTGATTGTTTCACCTGcagaaa

Function

NR:

description
PREDICTED: arrestin domain-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55299 False 748 lncRNA 0.36 2 18038648 18044946
TU55300 True 778 lncRNA 0.44 2 18038132 18044460

Neighbor

gene id symbol gene type direction distance location
adgrv1 adgrv1,LOC107660972,LOC107669515 coding upstream 25338 17907408 ~ 18012794 (+)
polr3g polr3g,LOC107669519,LOC107557435,LOC107756241 coding upstream 138510 17896074 ~ 17899622 (+)
LOC122345176 LOC107720189,LOC107660966 coding upstream 444446 17591913 ~ 17593686 (+)
rasa1a rasa1,rasa1a,LOC107720192,LOC107553923,LOC107669512,LOC107753180,LOC108443998 coding upstream 451780 17554410 ~ 17586352 (+)
LOC122344741 otpb,LOC107720233,LOC107587559,LOC107699682,LOC107682870 coding upstream 661123 17374852 ~ 17377009 (+)
nr2f1a nr2f1a,nr2f1,LOC107671052,LOC107567418,LOC107699709 coding downstream 316927 18361873 ~ 18369522 (+)
slf1 slf1,LOC107703243,LOC107756294 coding downstream 603819 18648765 ~ 18676675 (+)
fam81b fam81b,LOC107699714,LOC107703202,LOC107587521 coding downstream 761038 18805984 ~ 18814930 (+)
nol6 nol6,LOC107699715,LOC107587545,LOC107579382 coding downstream 787869 18832815 ~ 18842452 (+)
cert1a col4a3bpa,LOC107720288,LOC107587519,LOC107703248,LOC107555488 coding downstream 802990 18847936 ~ 18867441 (+)
G37449 NA non-coding upstream 18531 18019330 ~ 18019601 (+)
G37433 NA non-coding upstream 144859 17891951 ~ 17893273 (+)
LOC122345748 NA non-coding upstream 423136 17593868 ~ 17614996 (+)
G37331 LOC107720200,LOC107699749,LOC107756319,LOC107587493,LOC107703272,LOC107567144,LOC108423573 non-coding upstream 680373 17354606 ~ 17357759 (+)
G37333 NA non-coding upstream 685036 17351156 ~ 17353096 (+)
LOC122345897 NA non-coding downstream 60153 18105099 ~ 18120648 (+)
G37490 NA non-coding downstream 152257 18197203 ~ 18197542 (+)
G37491 NA non-coding downstream 233633 18278579 ~ 18278805 (+)
G37492 NA non-coding downstream 234590 18279536 ~ 18279793 (+)
G37495 NA non-coding downstream 305740 18350686 ~ 18353465 (+)
LOC122345691 NA other upstream 510688 17526024 ~ 17527444 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other upstream 665273 17364849 ~ 17372859 (+)
G37228 ncor2,LOC107742750 other upstream 1476391 16486620 ~ 16561741 (+)
G37227 NA other upstream 1477400 16474708 ~ 16560732 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other upstream 1642570 16391797 ~ 16395562 (+)
arsk arsk,LOC107703223,LOC107720292,LOC107756297 other downstream 797873 18842819 ~ 18847674 (+)
G37626 LOC107720210 other downstream 893867 18938813 ~ 18940895 (+)
msh3 msh3,LOC107720281 other downstream 917376 18962322 ~ 19014100 (+)
nrarpb nrarpb,nrarpa,nrarp,LOC108255347,LOC107595556 other downstream 1662342 19707288 ~ 19710070 (+)
col27a1b col27a1b,col27a1,LOC107699687,LOC107720196,LOC107552608,LOC107731038,LOC107720245,LOC107672548,LOC107587699 other downstream 1922631 19967577 ~ 20035380 (+)

Expression


Co-expression Network