G37501


Basic Information

Item Value
gene id G37501
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 18386010 ~ 18388002 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU55340
CATGGAGATCGTTATTACACTCGCATGATATGAAAACAAACCGGACGATTAATCAGGGCACAAACCGCCATTAATTCAAAGACGAAAGACTAACATATTCAAACGATTTATGATAAGTGAAATCAAAGATAAAATATCTGATCACGTCTTCATTTAATGAACCCTCCAAAGCGgataaaaaaaggcagaaaacacCCCACACTTCTATCCTTTCAGACTGGGATGTTTCAGTAAAACGTAGAACGTCTtcgattaaaatattaattgttaaaatgagTCCTTATTTACAAATCAATTAAGTTTTCGATTTGGTTTAAGGCTGTATTAAACGCGAGTGAAATATTCACATATGGCTTGTCGGTTTTGgaaaatcaaataaagatgGACGTTGTGTGTTTATTCCTAAGGCAACAATTTTGGGATCTGAGTTGAACGGTTTTAAATAGACAGTATTAAGCAACTTGCAGCTGATCGTTGGCGTTCTAATGAATATTTGCAGGAATGTTAAAAGTTTAATTCATtgtaaaaacagtttaaacacaaaagactCTGAACAGGGTCTTGCATTTTGTCAGCCATAgtcacatttctgtttttgatatatatatataaagatgagATATGCATAAAACACTACATCTATTGACAGATTTCCTTCAGCAATACGGGATAGCAATGATACTTCTAAAAGGTGATGAGGGCAAAACAGCCTTTTACCGTGAGATCAATTTTTAAGCGAAAGCAGAGTGATCTGTTGACATGCCTGAATGACATATCTAAGCCTCCGCTAACGCCAAATTGTCCAGGAGACAATGCCTCTTTGCTGAGACAGAAACATAACATGCTTTAGCTTTAGCAGAGGATGACAATGATGTGTTAAAACAGTCCAAACAGTCACGGACTTGGCAAAAAGGGCAGGTTACATTTGCAAACATCTTAAGGAATGGCTTTTATACTCTGGATAACATCAAATCGTCCTGATCCTGACACATACAAAGATATTCCAAGACTGACATATCTGCTCTGTCAAAGGGAGATATTCCCAAAACTCAAACTCGCACAAGGTTTTAAGAGATTTGAAAACGGAAGGATTCATTCAATCTGCCACGCTGTCAATGGCTTACTTCATTGTGTTCATTCTAAATCTAGTCTGGAGATAGCCGTTGATTGGATGTTTGATTCTGcaagttgcttttttttctccagttaaAGTGTTGTGCGAATGAAACAAACAACCCGTAAGCCTTTAGCATCTGACACACAAAGTTCCTAAGCACACAAGTTCTTTAAATGCGACTGAGACACTGgaaagaaacaatgaaacaacGGGGGGAAACCAATGAGAGATACAAAGACACTGAAGGCAGGCACTAGGACCCACCagacttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcaggtgctTCCCAGGCATTAGCTCAGTTCAGGACAATGTCAGGATAATTAGAGGTGCATCAAGAGGCGGTGTGCGGCGCCGCCTGTCAGCCTTAATCTGGCCACCGATGGGCCACCACCAAATCCACACAGCGGCCCACAGGAGGCACAAGCAGTGAAGCCATATTGCTTTGACAGTTGCACTCATCCAGAAGTAATGCAAAACGCTATTCTGATGTATACAGGCTGACCCTGCACTCCTCAGAGTCGTACAATTCACTGGGAGGAGGGCTTCAAGGAggaatatttttcataaaaagaacagaggagaaaaagaaCTAATAGGGGACAAAAGTGGGCTCTGGGTTGGGATCTGTGAGCCCTCTATAAGTCTTCGTTTTTTATGCGGTGGGAGCTGCGTGTGGTGACCGAGCTGGAGGAGGACTCATCCTCGTGGTCCTTAAGGGCATCGCTGAAGAACTTAAAGATGGAGTGGAAGCTCTTCCATGACGTTAACTCATGCTTATCCG
>TU55341
CATGGAGATCGTTATTACACTCGCATGATATGAAAACAAACCGGACGATTAATCAGGGCACAAACCGCCATTAATTCAAAGACGAAAGACTAACATATTCAAACGATTTATGATAAGTGAAATCAAAGATAAAATATCTGATCACGTCTTCATTTAATGAACCCTCCAAAGCGgataaaaaaaggcagaaaacacCCCACACTTCTATCCTTTCAGACTGGGATGTTTCAGTAAAACGTAGAACGTCTtcgattaaaatattaattgttaaaatgagTCCTTATTTACAAATCAATTAAGTTTTCGATTTGGTTTAAGGCTGTATTAAACGCGAGTGAAATATTCACATATGGCTTGTCGGTTTTGgaaaatcaaataaagatgGACGTTGTGTGTTTATTCCTAAGGCAACAATTTTGGGATCTGAGTTGAACGGTTTTAAATAGACAGTATTAAGCAACTTGCAGCTGATCGTTGGCGTTCTAATGAATATTTGCAGGAATGTTAAAAGTTTAATTCATtgtaaaaacagtttaaacacaaaagactCTGAACAGGGTCTTGCATTTTGTCAGCCATAgtcacatttctgtttttgatatatatatatataaagatgagATATGCATAAAACACTACATCTATTGACAGATTTCCTTCAGCAATACGGGATAGCAATGATACTTCTAAAAGGTGATGAGGGCAAAACAGCCTTTTACCGTGAGATCAATTTTTAAGCGAAAGCAGAGTGATCTGTTGACATGCCTGAATGACATATCTAAGCCTCCGCTAACGCCAAATTGTCCAGGAGACAATGCCTCTTTGCTGAGACAGAAACATAACATGCTTTAGCTTTAGCAGAGGATGACAATGATGTGTTAAAACAGTCCAAACAGTCACGGACTTGGCAAAAAGGGCAGGTTACATTTGCAAACATCTTAAGGAATGGCTTTTATACTCTGGATAACATCAAATCGTCCTGATCCTGACACATACAAAGATATTCCAAGACTGACATATCTGCTCTGTCAAAGGGAGATATTCCCAAAACTCAAACTCGCACAAGGTTTTAAGAGATTTGAAAACGGAAGGATTCATTCAATCTGCCACGCTGTCAATGGCTTACTTCATTGTGTTCATTCTAAATCTAGTCTGGAGATAGCCGTTGATTGGATGTTTGATTCTGcaagttgcttttttttctccagttaaAGTGTTGTGCGAATGAAACAAACAACCCGTAAGCCTTTAGCATCTGACACACAAAGTTCCTAAGCACACAAGTTCTTTAAATGCGACTGAGACACTGgaaagaaacaatgaaacaacGGGGGGAAACCAATGAGAGATACAAAGACACTGAAGGCAGGCACTAGGACCCACCagacttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcaggtgctTCCCAGGCATTAGCTCAGTTCAGGACAATGTCAGGATAATTAGAGGTGCATCAAGAGGCGGTGTGCGGCGCCGCCTGTCAGCCTTAATCTGGCCACCGATGGGCCACCACCAAATCCACACAGCGGCCCACAGGAGGCACAAGCAGTGAAGCCATATTGCTTTGACAGTTGCACTCATCCAGAAGTAATGCAAAACGCTATTCTGATGTATACAGGCTGACCCTGCACTCCTCAGAGTCGTACAATTCACTGGGAGGAGGGCTTCAAGGAggaatatttttcataaaaagaacagaggagaaaaagaaCTAATAGGGGACAAAAGTGGGCTCTGGGTTGGGATCTGTGAGCCCTCTATAAGTCTTCGTTTTTTATGCGGTGGGAGCTGCGTGTGGTGACCGAGCTGGAGGAGGACTCATCCTCGTGGTCCTTAAGGGCATCGCTGAAGAACTTAAAGATGGAGTGGAAGCTCTTCCATGACGTTAACTCATGCTTATCCG

Function

NR:

description
PREDICTED: transient receptor potential cation channel subfamily M member 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55340 False 1929 lncRNA 0.41 2 18386010 18388002
TU55341 True 1931 lncRNA 0.41 2 18386010 18388002

Neighbor

gene id symbol gene type direction distance location
nr2f1a nr2f1a,nr2f1,LOC107671052,LOC107567418,LOC107699709 coding upstream 16488 18361873 ~ 18369522 (+)
adgrv1 adgrv1,LOC107660972,LOC107669515 coding upstream 373216 17907408 ~ 18012794 (+)
polr3g polr3g,LOC107669519,LOC107557435,LOC107756241 coding upstream 486388 17896074 ~ 17899622 (+)
LOC122345176 LOC107720189,LOC107660966 coding upstream 792324 17591913 ~ 17593686 (+)
rasa1a rasa1,rasa1a,LOC107720192,LOC107553923,LOC107669512,LOC107753180,LOC108443998 coding upstream 799658 17554410 ~ 17586352 (+)
slf1 slf1,LOC107703243,LOC107756294 coding downstream 260763 18648765 ~ 18676675 (+)
fam81b fam81b,LOC107699714,LOC107703202,LOC107587521 coding downstream 417982 18805984 ~ 18814930 (+)
nol6 nol6,LOC107699715,LOC107587545,LOC107579382 coding downstream 444813 18832815 ~ 18842452 (+)
cert1a col4a3bpa,LOC107720288,LOC107587519,LOC107703248,LOC107555488 coding downstream 459934 18847936 ~ 18867441 (+)
ankrd31 LOC107699692,LOC107587543,LOC107720237 coding downstream 491037 18879039 ~ 18884885 (+)
G37495 NA non-coding upstream 32545 18350686 ~ 18353465 (+)
G37492 NA non-coding upstream 106217 18279536 ~ 18279793 (+)
G37491 NA non-coding upstream 107205 18278579 ~ 18278805 (+)
G37490 NA non-coding upstream 188468 18197203 ~ 18197542 (+)
LOC122345897 NA non-coding upstream 265362 18105099 ~ 18120648 (+)
G37540 NA non-coding downstream 290594 18678596 ~ 18750055 (+)
G37618 NA non-coding downstream 535300 18923302 ~ 18924676 (+)
G37619 NA non-coding downstream 537208 18925210 ~ 18925433 (+)
G37620 NA non-coding downstream 537435 18925437 ~ 18927002 (+)
G37734 NA non-coding downstream 900014 19288016 ~ 19288328 (+)
LOC122345691 NA other upstream 858566 17526024 ~ 17527444 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other upstream 1013151 17364849 ~ 17372859 (+)
G37228 ncor2,LOC107742750 other upstream 1824269 16486620 ~ 16561741 (+)
G37227 NA other upstream 1825278 16474708 ~ 16560732 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other upstream 1990448 16391797 ~ 16395562 (+)
arsk arsk,LOC107703223,LOC107720292,LOC107756297 other downstream 454817 18842819 ~ 18847674 (+)
G37626 LOC107720210 other downstream 550811 18938813 ~ 18940895 (+)
msh3 msh3,LOC107720281 other downstream 574320 18962322 ~ 19014100 (+)
nrarpb nrarpb,nrarpa,nrarp,LOC108255347,LOC107595556 other downstream 1319286 19707288 ~ 19710070 (+)
col27a1b col27a1b,col27a1,LOC107699687,LOC107720196,LOC107552608,LOC107731038,LOC107720245,LOC107672548,LOC107587699 other downstream 1579575 19967577 ~ 20035380 (+)

Expression


Co-expression Network