G37618


Basic Information

Item Value
gene id G37618
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 18923302 ~ 18924676 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU55490
ATCGGACAAAGCATTTACAAGTTTTGGAccaacatgggggtaagtgattaatggcaaaatgttcattttgggttgAAGTAACCCACTTAAAGCACCAAGTTTGTAACCTGAGCTTCCTGTCTGGTATTCTGGACGTCTTGTCTCTGCTTTGTCTGTCTCTCCTCCTCAGCCAGCACCAGTTGTTTTAGTTCAGTCTCACAGGCCGGATGGCTCAGACGCACACGCAACTGACCCCTGTGTTCCCTCTACGACAGCAGGCCACAAAATAGGACAAACCTGGTGACCTATTCTTTACGAGGTTCATGTGTGCAACACTTTGCAAACATCTGAAGTAGATAACAGTACTCTTTCACTGTGACAGTTTAGTGCCTTCTTCCTCAGAGTGACTACAAGGGAGGAACTTGATAGGTCAGGATGACAGAATAATTTCCTCTGCTCTCACCATTGTTCTGCATTTGTTCACGTACCCTCTTTTGTTCACTCTGCTGCTGAGTTAGTTGAAACCGGTGTTGAATTTCTGTCATGTTTTGCATCAACTCCTCAAGGTATTGATCTCTTAGTTTAGAAAAAAGCTTCTCTGGTACACTGCACAGAAACTCTTCAATTGTCTTCAACTGCAGCTGAAATTCTACACAGAGCGAAAAGtgtaacatattaataaatattagaaatgcacattgttttgttttgtaaccaGATCCCTGTTATTCTTTgtactgaaatttaaaaatattgtattttgcCTGTCCATCATTAtcttttccaaacctgtatgagtatttttcttctgttaaacatatcgatattttgaagaacagcTGAACTGACATTCATAATATGAGAAAAATACTAAGGATGTCAATAGCGTCCAGATGGGTTTGGTCTTGTCCAAAATGCCTTtaatcagaagaaaaacattcatacaggtttagatcAACTTGAGGGTGATTAAATAATGGCAGAAACAGTGACATTTGACATCAGACTTAACAAGTGAATGGTATCGTCACACATATTGCATTGTAACCGGTTTGCCtatttttttggacattttgggCCATTTCATGGGTTAACCTTGCAGACAGCTGTTGTGGTAATCATGTGACTGGCTCTGGTAGATAAGAAGTCTTTTGTGTATCTCCTCTGCACACTGATCAAATGTCTCCTGCAGTTGTTCAGGACGAGTGATAGGTCGGCGCTCTTTCTTCTTATAGAACTCCTGATGGTGACACACAGCTCAGTCCAAAATCAACAGTTTTAACACCTTATTTGTATGAAACAGATTGACCTAATATTTTTTCACCGTACCTCTGCCACCAGGAGCAGAATATCATTGGCTTTCCACAGAATACTGGTTATTGAAGCTTTAAAGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55490 True 1375 lncRNA 0.40 1 18923302 18924676

Neighbor

gene id symbol gene type direction distance location
pomt1 LOC107720285,LOC107699719,LOC107587516,LOC107756274,LOC107555474,LOC107703250 coding upstream 1787 18914683 ~ 18921515 (+)
LOC122345689 NA coding upstream 9222 18900511 ~ 18914080 (+)
gcnt4a LOC107699693,LOC107720226,LOC107587561,LOC107703224,LOC107555473,LOC107756273 coding upstream 31996 18890017 ~ 18891306 (+)
LOC122345996 NA coding upstream 33367 18885057 ~ 18889935 (+)
ankrd31 LOC107699692,LOC107587543,LOC107720237 coding upstream 38417 18879039 ~ 18884885 (+)
ubac1 ubac1,LOC107699722,LOC107587514,LOC107555477,LOC106579794 coding downstream 28701 18953377 ~ 18961721 (+)
rasgrf2b rasgrf2b,rasgrf2,LOC107720279,LOC107756301,LOC107703251,LOC108423655 coding downstream 90635 19015311 ~ 19068269 (+)
ckmt2b ckmt2,ckmt2b,LOC107720280 coding downstream 144229 19068905 ~ 19074630 (+)
tent2 LOC107720275,LOC107699727,LOC107587508,LOC107756276,LOC107703258 coding downstream 233183 19157859 ~ 19164155 (+)
cmya5 cmya5,LOC107699728,LOC107720274,LOC107703257,LOC107555495,LOC107756304 coding downstream 239841 19164517 ~ 19177886 (+)
G37540 NA non-coding upstream 173247 18678596 ~ 18750055 (+)
G37497 NA non-coding upstream 533236 18373499 ~ 18390066 (+)
G37501 NA non-coding upstream 535300 18386010 ~ 18388002 (+)
G37495 NA non-coding upstream 569837 18350686 ~ 18353465 (+)
G37492 NA non-coding upstream 643509 18279536 ~ 18279793 (+)
G37619 NA non-coding downstream 534 18925210 ~ 18925433 (+)
G37620 NA non-coding downstream 761 18925437 ~ 18927002 (+)
G37734 NA non-coding downstream 363340 19288016 ~ 19288328 (+)
G37843 NA non-coding downstream 669394 19594070 ~ 19647075 (+)
G37951 NA non-coding downstream 835035 19759711 ~ 19760204 (+)
arsk arsk,LOC107703223,LOC107720292,LOC107756297 other upstream 75628 18842819 ~ 18847674 (+)
LOC122345691 NA other upstream 1395858 17526024 ~ 17527444 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other upstream 1550443 17364849 ~ 17372859 (+)
G37228 ncor2,LOC107742750 other upstream 2361561 16486620 ~ 16561741 (+)
G37227 NA other upstream 2362570 16474708 ~ 16560732 (+)
G37626 LOC107720210 other downstream 14137 18938813 ~ 18940895 (+)
msh3 msh3,LOC107720281 other downstream 37646 18962322 ~ 19014100 (+)
nrarpb nrarpb,nrarpa,nrarp,LOC108255347,LOC107595556 other downstream 782612 19707288 ~ 19710070 (+)
col27a1b col27a1b,col27a1,LOC107699687,LOC107720196,LOC107552608,LOC107731038,LOC107720245,LOC107672548,LOC107587699 other downstream 1042901 19967577 ~ 20035380 (+)
lix1 lix1,LOC107552634,LOC107699708,LOC107587723,LOC107672536 other downstream 1218607 20143283 ~ 20151686 (+)

Expression


Co-expression Network