G37843


Basic Information

Item Value
gene id G37843
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 19594070 ~ 19647075 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU55830
CTGAtcgtatgtttttattttagcacgTCCTAAAACGCGTCTTCACGGTATAAACTCAGAGGCCCTTATTTATTGAACAGGGGGAGAAGGAACTgctgtgtattttaaataatatgactTCTACGCATGTTGTCCCACTGActtaaatgcagcattttatGCAAGAAATTTGTTCTGCTTGCATTTCATTAACACCACAGTGCTTTTACTTcctatttctatatttatggTCTTCCTTTTCAATACCTCGTTTGCATATGGCAAACACTTTATACCCGTTGTGCAAAAAGCCCGTATCAACCTGTGAACTTTGCAAAAGTcacaagaacatttttattacccAGTGATGACAGTAAACAACAGTAAAGGTAACCCAACCCAGTTAAGTGCAGGTTACCCAACAGCTTGTTAACATCAACTGCACACTGAAAACCAGTCTAATTCATTTTAACCTAGAAAATAATTCCCACTCTCTCGTTATTtgacaaacaatttttttgggggggtaaTTTCcaactaattttcattttgcatatcAGTTATGCTTGTCTCCTACGAAATGCAGAGCGTTACTTTCATTCAGACAGAAGGTCCATCTATCCTGGAGGCCATTTCATTTGTCGTCCTCCGAGAACATGAACGTGAAGGTGATACACGGACTGTGCCCCATTCTTTCCATCtaattttcattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55830 True 692 lncRNA 0.38 2 19594070 19647075

Neighbor

gene id symbol gene type direction distance location
LOC122346079 LOC107720263,LOC107756281,LOC107699747,LOC107567145,LOC107703219 coding upstream 12004 19578598 ~ 19582066 (+)
scarb2a scarb2,LOC107699748,LOC107567147,LOC107703216,LOC107756261 coding upstream 34721 19546728 ~ 19559349 (+)
LOC122344925 LOC107720221,LOC107699684,LOC107703270,LOC107756316,LOC107577860 coding upstream 61000 19521428 ~ 19533070 (+)
apba1a apba1,apba1a,LOC107587500,LOC107720269,LOC107756314,LOC107567151 coding upstream 87343 19458358 ~ 19506727 (+)
ptar1 LOC107699739,LOC107587501,LOC107567149,LOC107703268,LOC107756313 coding upstream 136330 19448258 ~ 19457740 (+)
mboat4 LOC107720232,LOC107672543,LOC107567140,LOC107756285 coding downstream 12588 19659663 ~ 19664672 (+)
LOC122344990 ttc16,LOC107699760,LOC107720230 coding downstream 79745 19726820 ~ 19733472 (+)
adamtsl2 adamtsl2,LOC107699701 coding downstream 97470 19744545 ~ 19759281 (+)
notch1b LOC107720248,LOC107567148,LOC107699763,LOC107672539,LOC107745520 coding downstream 147721 19794796 ~ 19832854 (+)
camsap1b LOC107720249,LOC107552625,LOC107672541 coding downstream 190680 19837755 ~ 19860160 (+)
G37734 NA non-coding upstream 305742 19288016 ~ 19288328 (+)
G37620 NA non-coding upstream 667068 18925437 ~ 18927002 (+)
G37619 NA non-coding upstream 668637 18925210 ~ 18925433 (+)
G37618 NA non-coding upstream 669394 18923302 ~ 18924676 (+)
G37540 NA non-coding upstream 844015 18678596 ~ 18750055 (+)
G37951 NA non-coding downstream 112636 19759711 ~ 19760204 (+)
G37956 NA non-coding downstream 147368 19794443 ~ 19867398 (+)
G37958 LOC107745529,LOC107672542,LOC107720246,LOC107552607 non-coding downstream 226167 19873242 ~ 19874144 (+)
G38082 NA non-coding downstream 480326 20127401 ~ 20392624 (+)
G38091 LOC107699781,LOC107552636,LOC107587661,LOC107672574 non-coding downstream 523899 20170974 ~ 20552306 (+)
msh3 msh3,LOC107720281 other upstream 579970 18962322 ~ 19014100 (+)
G37626 LOC107720210 other upstream 653175 18938813 ~ 18940895 (+)
arsk arsk,LOC107703223,LOC107720292,LOC107756297 other upstream 746396 18842819 ~ 18847674 (+)
LOC122345691 NA other upstream 2066626 17526024 ~ 17527444 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other upstream 2221211 17364849 ~ 17372859 (+)
nrarpb nrarpb,nrarpa,nrarp,LOC108255347,LOC107595556 other downstream 60213 19707288 ~ 19710070 (+)
col27a1b col27a1b,col27a1,LOC107699687,LOC107720196,LOC107552608,LOC107731038,LOC107720245,LOC107672548,LOC107587699 other downstream 320502 19967577 ~ 20035380 (+)
lix1 lix1,LOC107552634,LOC107699708,LOC107587723,LOC107672536 other downstream 496208 20143283 ~ 20151686 (+)
G38092 LOC107699781,LOC107552636,LOC107587661,LOC107672574 other downstream 537960 20185035 ~ 20513916 (+)
LOC122345823 LOC107740804,LOC107665032,LOC108255802,LOC107672563,LOC107731037 other downstream 637542 20284617 ~ 20297222 (+)

Expression


Co-expression Network