col27a1b (col27a1b,col27a1,LOC107699687,LOC107720196,LOC107552608,LOC107731038,LOC107720245,LOC107672548,LOC107587699)


Basic Information

Item Value
gene id col27a1b
gene name col27a1b,col27a1,LOC107699687,LOC107720196,LOC107552608,LOC107731038,LOC107720245,LOC107672548,LOC107587699
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 19967577 ~ 20035380 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU56081
ATCTCACCCGGCAAGGCACAAAATGGAATAAagGGGGACCCTGGTATATTAGGGCTACCCGGACTACCCGGTCAAGCTGGTCGGAAGgGACAGCAAGGCCATCCTGGTCCATCTGGCCAACCCGGAGATCAAGGAGAAAGAGGACTGGATGGAAGCCCGGGTGCCAAAGGTTATCCTGGCAGGCAGGGTTTGTCAGGGCCTATAGGAAATATGGGACCAAAAGGTGTACGGG
>XM_043238756.1
GACAGTTGAGGGCGACAGAGGGAAATACGCTTCCAGTGTCTCAAATCTTCAGCATGCCTACTAAGTGCTTCAGATTTAGTCAGCGACTTGACTAGGCGCTTGTACTTCACCTCAGCAAACCATGTCTGTGCCGCTTTGGACTTAACTTTGCAGTTTTCAGCATCGTCTTGGTGTTTTGCCGTCAGATGGAGAAGTCTCGCATCGCGCTTCACATGTTCCTCTCTTTGGAAAGTAGCATTACATTTGGCACTTGGGAAGGACCACGGCATGTAGTATCGCGCTACAGCGTTGCGTGAAGACCTTCGGCGGTTATTAAAGGACATTGTGATATGGAAGTAATTGAGCAACTCTGTCATGTCTTGACTGCAGCAGCAAACACTCCCGAGGAAGAATGAAGTAAGCGCGATGGAGCCGGACAATGCCCCGAACTCCAGACCCAAAGCAGCTGGAGTCGGGGGgAGAGCTGTCTTTCTCTTCATGGTTCTTTACTGTACGTGCTGTCTGAGGTTTGCACAAGCACAGTCTACAGATGTGGATGTGCTCCAAAGACTGGGATTGGTTGGGAAACGACCGTCTGGGACACGCTCCCCACCTCAAGGTGTCATCCCCTTTAAATCAGGAGTCATCCTAAACCAGAGGGCACGAATTGACGTCCCAGTGAGCTCCGTCATCCCGGCATCACTGGGCTCGACGTTCTCTCTCATCCTCAGTGTATGTTCGCATCGCATAAACAATGCTTTCCTCTTCACCGTTGTGACAAAGAGGAAAAGACTGCAGCTAGGGGTGCAGTTCATCCCTGGGCAAATCGTATTTTACTTGGGCCAAAAGAACGCTGTAAATTTTGATTATGATGTTCACAATGGTCAGTGGCACAACCTGGCTTTGGAAATCCAGGCCCAAAGGGTTACGTTATATACTTCTTGTGGGAAGACAAGTGTACAagcaaatttgcattttaaaaatgaggaAACGCTGGATCCAGAGGGCTCCTTTCGTTTGGGAAAAACGAGCCAGAACTCAGTGCAGTTTGAAGGAGCCATCTGTCAGTTTGATATTCATCCCTCTGCTAAGGCAGCTCACAATTATTGtaagtacattaaaaaacagTGCAGGGAAGCTGACACTTATCGGCCAAACCTCTCTCCTCTTTTACCGTTATTACCCCTGGATCCCAATATATCTGTTACCGTTCAGACCCCAAATGTTGTAACAGAGGTAAATGACAGACATCTTTCATTAACACAAGACAAAGTACACATTAATCATGAAACCTCACGAGTCCTAAACACCTCCGTTTTAATTACATCTCAGTCCGTACAAAGCACGTTAGCACCGATGATAGCTCACCCCACACTACAGCTCCCCCTGCAGGCCTCAGCACAAACTGCCATGGCCTCCTTTGGGAGTAGGacatcagaaatatcttcaaAGCCAACTCAGCAAAGCAGTCACAGGAGAAACCTCATAAGGGCAACTGTAAAGCCCCAGATACTAAAAGAGAACGGGATTGCTATCACCTCCACGCCAGCAGGCCAACAGAAGAACAAACTGGATATCCAGACCACTGCCACAACAAAACCTACATCTTCTAGCACATCCAGAGTTTCTGAGATGACAAATATAGCACCACAGAGACCTTTTCCAAAGGAAACCTCCATACCAAGCTCCTTTGAGACCGTCACTCCTGCAGCAACGGAtggtttccaaacttttgaccttGAACCAACCCAATACTCCCTCTTGGCTGGGCCACCAGGACAGAAAGGAGAACCAGGACCACCGGGACCTCCAGGACCTCCTGGAAAGCCAGGATTACCAGGAAAGAGAGGGCCCAGGGGTTCCCCTGGTCCGCATGGAAACCCAGGCCGCCCAGGGACCAACGGGCCCAAGGGAAAAAAGGGAGGCCCTGGGATCTCACCCGGCAAGGCACAAAATGGAATAAagGGGGACCCTGGTATATTAGGGCTACCCGGACTACCCGGTCAAGCTGGTCGGAAGgGACAGCAAGGCCATCCTGGTCCATCTGGCCAACCCGGAGATCAAGGAGAAAGAGGACTGGATGGAAGCCCGGGTGCCAAAGGTTATCCTGGCAGGCAGGGTTTGTCAGGGCCTATAGGAAATATGGGACCAAAAGGTGTACGGGGCTTCATTGGAATCCCAGGCGTCTTTGGTCTCCCGGGACCTGATGGAGAAAGAGGTTTACCTGGTGTTCCTGGGAAGAAGGGCAAGATGGGTAGGCCGGGCTTTCAAGGAGGTTTTGGGGAGCAAGGACCACCAGGACCTGATGGAAACCCAGGGGAGATGGGTGCCCCAGGTCCCGTTGGCATCCCTGGTTTTATTGGTGATATGGGTCTTGTTGGAATTGTGGGTCTTCCTGGATTAATAGGACCAAAGGGAGTACCAGGAAACCCTGGCGAGCCTGGACTGAAAGGTGATAAGGGTGAAGTCGGGTTTCCAGGTGAACCGGGAGAACCTGGATTCCAAGGTGACAAGGGTAATCAGGGCTCATCAGGTTTACCAGGAATTCGAGGAAAGCCAGGACCTCAGGGGCAACCTGGAGATCGAGGCCCAGACGGTTTGCCAGGCCCATCTGGCCCTAAGGGTTTTCCAGGGGATTTTGGACCACCAGGACAAAATGGTGCTGATGGCCCAAAGggGAATGCAGGAACAAGAGGGATTCCGGGCCCTACAGGAGTTACAGGACTTGAGGGAGATCAGGGCCCAGTAGGACCACCAGGGGCTCCAGGACTAGAGGGCAGACCTGGGAGGAAGGGTTTCCCTGGGAATCCAGGGGAGGAGGGAATGAAGGGCGAGCCTGGATTTCCTGGAAATCCTGGGATGCTTGGTGAGAGGGGTCTTATTGGTTTTGTCGGACCTGTCGGTGAGGTGGGGTTTCCTGGAGAAAAGGGAGATCGTGGTGAGATGGGTCTGCCCGGGCCACCTGGAGAAAAGGGAGCGATGGGACACCCTGGGGCCCCGGGTGAGAGAGGCCCATCTGGACCAGAAGGTACACCAGGGCCTCCTGGGTCTAGGGGCCTCAGTGGCACCAGAGGACCCAAAGGCATAAGGGGTGCAACGGGACCAGACGGACCAGGTGGAGACAAAGGAGTGGTGGGAATGAAGGGTCCTGAAGGCCCGCCGGGGAAACAAGGCTTCAGCGGACAAGtgGGTGAAATTGGAGAAACTGGTGAAACCGGACCAACTGGATTTCCAGGTGTTCAAGGACCAACTGGACCTCCTGGTGCAAAAGGCATCTTAGGAGAACCTGGTCCTCAAGGGCCATCAGGAGTATTAGGTCCATTGGGTGAGATTGGAGCAGTGGGTTTACCCGGAAAGGTTGGGGAGCAAGGCCTACCAGGTGAACCCGGAGAGAAGggtGTTGATGGATCTCCTGGGAATATGGGAGAGCAAGGCTTGATTGGAACTCGAgGCGACCCTGGGCTTGATGGGGAGGCTGGCCTGAGTGGCCCTGATGGAACTAAgGGTGAGAAGGGTGACATTGGTATGGAAGGAGAAACAGGTGAAAACGGAGCCATCGGATTTAAAGGAACAGAAGGCCGTGTGGGAGACCCTGGCATAACAGGTTTAAAGGGCCCTGAGGGCAAACCCGGAAAAACTGGTGAGAGGGGAAAACCTGGAGAGAAGGGCAGCAAAGGTCCCCAGGGTCACCTTGGCGAGACTGGACAAATGGGAGAACAAGGTACCATGGGTTTCATCGGGCCAAAAGGAAGCAGAGGAACTATTGGGTTTatgGGTGCTCCAGGGAAAATGGGTCAGCATGGAGAACCAGGTTTAGTGGGATATGAAGGTCATCAAGGACCACAAGGTCCCATGGGATCCACAGGACCAAAAGGTGAAAAgGGAGAGCCAGGTGATGATGGGAAGGTTGAAGGTCCACGCGGTCCTTTAGGTGACATCGGGCCTGTTGGCAACAGAGGAGAAAGGGGACAGCCAGGTGACCCTGGATACCAAGGTCACGAAGGTGTTCATGGGCAAAGAGGAAACCCAGGGGCTCCTGGACTCCCTGGAAATGCCGGGCCAAAAGGTTTTCCAGGGCCTAAAGGATCCAAAGGCAATAAAGGTGCAAAGGGCAAAAATGGCCCGCGCGGGAAATCTGGAAATCGAGGGTCACCTGGTCCTGTTGGTCTCCCTGGCCCCAGAGGAGTTGTTGGTCGTGAGGGTCCTGAGGGTGATCCTGGGATAGAAGGAACCCTTGGGAAAGATGGAGCTAAAGGAATGCCAGGTGAGCACGGAGGTGATGGGGAGGTTGGTCCACCTGGAAAAGCAGGTCCTCAAGGAAACACGGGTGTATCAGGTCTGCCAGGAATTCAAGGCTCTTTTGGGCCAAAGGGTGAAAGGGGCATCCCTGGCCAAGCTGGACCTCCAGGAAAAAGAGGATTTAATGGGGGAATGGGATTTCCTGGAAAACAAGGTGACCgtggggtcaaaggtcaaccTggtGACTCTGGTGAACAGGGATTTCCTGGAGTTCTTGGAATATTTGGACCAAAGGGGCCTCCTGGAGACCTTGGCCCAGTGGGAATCCAGGGCCCGAAGGGTCCTCAGGGTTTAATGGGTATGCAAGGAGTCATCGGACCCGTTGGTATCATTGGGCCTAGTGGTAACCCAGGACAACAAGGAGACAAAGGAAACAGAGGGGAAATGggTGTTCAGGGACCCAGGGGACTTCCAGGTCCTCGTGGACCACCTGGACCTCCAGGGCTTCCTGGTGTATCTCTCTCTCATGAAAGTGAAGCTCTTGGTGCTGCTTTAGTTATGGATTCCCGCTCCACTTTACGGTCCAAGACATATGAAGATACAGACCCTCTAATGCTGGACCAGGGAAGCCAAATCTTTAAGACTCTTCGCTACCTCAGCACTCTGATCCACAGCATAAAGAATCCTCTGGGAACACAGGAGAATCCTGCCAGAATGTGCAGAGATCTGTTTGAATGCGAGCACAGGTTGAACGACGGCACTTATTGGATAGATCCTAACCTGGGCTGCGCTTCTGACAATATTGAAGTGACCTGCAACTTCACCACTGGAGGTCAAACCTGCCTCAAGCCAGTCGCTGTTTCCAAGTTGGAGATTGGAGTGAGTCTGATCCAGATGAACTTCATCCACCTCCTGAGCTCTGAAGCTGTGCAGATCATCACCATTCACTGCCTGAACGTCTCTGTTTGGGCAGCAGGGGACTCCAAAACACCTTCCTCTAGTGCAGTGTACTTTAAAGCCTGGAACGGACAGATAATCGAGTCTGGGGGATTCATCGAGCCTGAGCTGATAAAGGACGAGTGCTGGATGACAGATGGACAATGGCATCAGACACAGTTCATGTTCCAGACGGAGGACCCAAACTTACTGCCCATTGTGGAGGTCCACAACTTCCCCAGCACAAAATCTGGCTCACATTACCACCTTGAAGTGGGGCCTGtgtgctttttataaaaaaaaaaaatcaacaatgaAAGCCTTGAATACCCCGATCAGCAGCATTACAGAGCCTCTATCTGGCCTAGAAACCAACAAAACTGTACATCTCCTCTCCAGCGTGGACTGCAGCCTTTAAACATGAGGAAAGAAGGAACTAGAGCAGCTTTGGAGAAAACAAGACTTCTTATGTGAGCAGCTCGGGATGACAGATTCTTTCTTTTCTGAGCTGGGATTTCTTCTGTTCGAAAACGAGGCCTGGAGATGTGGTTAGAGGTGCTTCCTAAACTCTTAATAGAAGTCTTAATTTATTCGTAGTTGGGTTTTTCCCAAATGATCCGTGTGGACAAGGaacaattaagacattttatttttaatgaagtacTTATTTTGTATTCTATAGTCATACATGatcatgtgtatttatacatgtacgtgtgtgtttgtatattttctgtgtAAAGTGCAATAGAGAATGGacagattgttttgttttttaaagatgaatctTCTGTTTGGCTGTTCTAGGCATTTGAGGTTTTACTGTCATATCATTCAATTCAGGTTCATTGTCTTGTGTACTTGTGTATATACCAGCAGGTCTGTTGTAAAAGCCTTCGATACCAACATGCATACAAAAACACGCATATGCATGAATTCATAGCTAGAATATCAGTTGAGGTGAATCCAGACTTGAAAAGCAACATATAAACGTCTACCTCCCATCTCTCATTTTTTGGTGTTTTGGGACAGTAAATGGATTCACATGCATTTAACTCCTGTGGTaagatttcaaatgtttttaacttaaGTGCCTTTTATACTTTGAAAgggaatatttttgtataaatctttaaaaaggaaaaagatctttttttttcagccaaacATAATTGTAACCCTTTATCTTCTAGTATGCCTTATTTGTACAAATGTTTGAACTTTAAGGGCTGAAGAATTATATTATCATAGCAGACATTGtgttaaaagtgctttatatCACTCAACTCTAGGTCTTTCCATCATTAAGTACATATATGCATTTCCATAAGCCCTATCTGACTGCAGTAGTAATTGTTTGACATGGTCTGTGTCATAATTGCTGATTTTTGTATGTCTTTTGTAAGGCCCGTGTACAAAGATAAATGTTGCAGTTAGAAACTGCAAACCTGAGTTGTAATAAGAAGTTGTTAAACTAAATGAGAACACTAGAATCTTCCACTATATTGGGTCTGTTATGAGCAGTGACTTTGACTTTGAGTCACGGCAAGctaattattgattattatgaGTTATGTATGATATTcttgtgaaatatatatgttgttttcaTCAAAACCGTCAGGAGCCATCTTATCTTGCCAAAAGAGGTTGTTAAATATCTGTTctttatttgtgtacatttacGATCTTGCTGTAATCCACGTTTTGTGATTTCAGAGCAGACAAAGAAAGGTGGATATTTtccaattaatattttatggtcAGGCATTACCTATGAACAACAGCAAACGCCAAAGAACGAAGATTTCAGCGTTTACAAATTAAATCCGTGATACCACAGAAACAGACAGCAGTCTTTATATCTGTTTGCCTTACTAAAGTTCTTGTTTCTGGCCAATCTCGTGTCTCATTTGAATAAAGGAAACATGTTGACAATCTTCA
>XM_043238757.1
GACAGTTGAGGGCGACAGAGGGAAATACGCTTCCAGTGTCTCAAATCTTCAGCATGCCTACTAAGTGCTTCAGATTTAGTCAGCGACTTGACTAGGCGCTTGTACTTCACCTCAGCAAACCATGTCTGTGCCGCTTTGGACTTAACTTTGCAGTTTTCAGCATCGTCTTGGTGTTTTGCCGTCAGATGGAGAAGTCTCGCATCGCGCTTCACATGTTCCTCTCTTTGGAAAGTAGCATTACATTTGGCACTTGGGAAGGACCACGGCATGTAGTATCGCGCTACAGCGTTGCGTGAAGACCTTCGGCGGTTATTAAAGGACATTGTGATATGGAAGTAATTGAGCAACTCTGTCATGTCTTGACTGCAGCAGCAAACACTCCCGAGGAAGAATGAAGTAAGCGCGATGGAGCCGGACAATGCCCCGAACTCCAGACCCAAAGCAGCTGGAGTCGGGGGgAGAGCTGTCTTTCTCTTCATGGTTCTTTACTGTACGTGCTGTCTGAGGTTTGCACAAGCACAGTCTACAGATGTGGATGTGCTCCAAAGACTGGGATTGGTTGGGAAACGACCGTCTGGGACACGCTCCCCACCTCAAGGTGTCATCCCCTTTAAATCAGGAGTCATCCTAAACCAGAGGGCACGAATTGACGTCCCAGTGAGCTCCGTCATCCCGGCATCACTGGGCTCGACGTTCTCTCTCATCCTCAGTGTATGTTCGCATCGCATAAACAATGCTTTCCTCTTCACCGTTGTGACAAAGAGGAAAAGACTGCAGCTAGGGGTGCAGTTCATCCCTGGGCAAATCGTATTTTACTTGGGCCAAAAGAACGCTGTAAATTTTGATTATGATGTTCACAATGGTCAGTGGCACAACCTGGCTTTGGAAATCCAGGCCCAAAGGGTTACGTTATATACTTCTTGTGGGAAGACAAGTGTACAagcaaatttgcattttaaaaatgaggaAACGCTGGATCCAGAGGGCTCCTTTCGTTTGGGAAAAACGAGCCAGAACTCAGTGCAGTTTGAAGGAGCCATCTGTCAGTTTGATATTCATCCCTCTGCTAAGGCAGCTCACAATTATTGtaagtacattaaaaaacagTGCAGGGAAGCTGACACTTATCGGCCAAACCTCTCTCCTCTTTTACCGTTATTACCCCTGGATCCCAATATATCTGTTACCGTTCAGACCCCAAATGTTGTAACAGAGGTAAATGACAGACATCTTTCATTAACACAAGACAAAGTACACATTAATCATGAAACCTCACGAGTCCTAAACACCTCCGTTTTAATTACATCTCAGTCCGTACAAAGCACGTTAGCACCGATGATAGCTCACCCCACACTACAGCTCCCCCTGCAGGCCTCAGCACAAACTGCCATGGCCTCCTTTGGGAGTAGGacatcagaaatatcttcaaAGCCAACTCAGCAAAGCAGTCACAGGAGAAACCTCATAAGGGCAACTGTAAAGCCCCAGATACTAAAAGAGAACGGGATTGCTATCACCTCCACGCCAGCAGGCCAACAGAAGAACAAACTGGATATCCAGACCACTGCCACAACAAAACCTACATCTTCTAGCACATCCAGAGTTTCTGAGATGACAAATATAGCACCACAGAGACCTTTTCCAAAGGAAACCTCCATACCAAGCTCCTTTGAGACCGTCACTCCTGCAGCAACGGAtggtttccaaacttttgaccttGAACCAACCCAATACTCCCTCTTGGCTGGGCCACCAGGACAGAAAGGAGAACCAGGACCACCGGGACCTCCAGGACCTCCTGGAAAGCCAGGATTACCAGGAAAGAGAGGGCCCAGGGGTTCCCCTGGTCCGCATGGAAACCCAGGCCGCCCAGGGACCAACGGGCCCAAGGGAAAAAAGGGAGGCCCTGGGATCTCACCCGGCAAGGCACAAAATGGAATAAagGGGGACCCTGGTATATTAGGGCTACCCGGACTACCCGGTCAAGCTGGTCGGAAGgGACAGCAAGGCCATCCTGGTCCATCTGGCCAACCCGGAGATCAAGGAGAAAGAGGACTGGATGGAAGCCCGGGTGCCAAAGGTTATCCTGGCAGGCAGGGTTTGTCAGGGCCTATAGGAAATATGGGACCAAAAGGTGTACGGGGCTTCATTGGAATCCCAGGCGTCTTTGGTCTCCCGGGACCTGATGGAGAAAGAGGTTTACCTGGTGTTCCTGGGAAGAAGGGCAAGATGGGTAGGCCGGGCTTTCAAGGAGGTTTTGGGGAGCAAGGACCACCAGGACCTGATGGAAACCCAGGGGAGATGGGTGCCCCAGGTCCCGTTGGCATCCCTGGTTTTATTGGTGATATGGGTCTTGTTGGAATTGTGGGTCTTCCTGGATTAATAGGACCAAAGGGAGTACCAGGAAACCCTGGCGAGCCTGGACTGAAAGGTGATAAGGGTGAAGTCGGGTTTCCAGGTGAACCGGGAGAACCTGGATTCCAAGGTGACAAGGGTAATCAGGGCTCATCAGGTTTACCAGGAATTCGAGGAAAGCCAGGACCTCAGGGGCAACCTGGAGATCGAGGCCCAGACGGTTTGCCAGGCCCATCTGGCCCTAAGGGTTTTCCAGGGGATTTTGGACCACCAGGACAAAATGGTGCTGATGGCCCAAAGggGAATGCAGGAACAAGAGGGATTCCGGGCCCTACAGGAGTTACAGGACTTGAGGGAGATCAGGGCCCAGTAGGACCACCAGGGGCTCCAGGACTAGAGGGCAGACCTGGGAGGAAGGGTTTCCCTGGGAATCCAGGGGAGGAGGGAATGAAGGGCGAGCCTGGATTTCCTGGAAATCCTGGGATGCTTGGTGAGAGGGGTCTTATTGGTTTTGTCGGACCTGTCGGTGAGGTGGGGTTTCCTGGAGAAAAGGGAGATCGTGGTGAGATGGGTCTGCCCGGGCCACCTGGAGAAAAGGGAGCGATGGGACACCCTGGGGCCCCGGGTGAGAGAGGCCCATCTGGACCAGAAGGTACACCAGGGCCTCCTGGGTCTAGGGGCCTCAGTGGCACCAGAGGACCCAAAGGCATAAGGGGTGCAACGGGACCAGACGGACCAGGTGGAGACAAAGGAGTGGTGGGAATGAAGGGTCCTGAAGGCCCGCCGGGGAAACAAGGCTTCAGCGGACAAGtgGGTGAAATTGGAGAAACTGGTGAAACCGGACCAACTGGATTTCCAGGTGTTCAAGGACCAACTGGACCTCCTGGTGCAAAAGGCATCTTAGGAGAACCTGGTCCTCAAGGGCCATCAGGAGTATTAGGTCCATTGGGTGAGATTGGAGCAGTGGGTTTACCCGGAAAGGTTGGGGAGCAAGGCCTACCAGGTGAACCCGGAGAGAAGggtGTTGATGGATCTCCTGGGAATATGGGAGAGCAAGGCTTGATTGGAACTCGAgGCGACCCTGGGCTTGATGGGGAGGCTGGCCTGAGTGGCCCTGATGGAACTAAgGGTGAGAAGGGTGACATTGGTATGGAAGGAGAAACAGGTGAAAACGGAGCCATCGGATTTAAAGGAACAGAAGGCCGTGTGGGAGACCCTGGCATAACAGGTTTAAAGGGCCCTGAGGGCAAACCCGGAAAAACTGGTGAGAGGGGAAAACCTGGAGAGAAGGGCAGCAAAGGTCCCCAGGGTCACCTTGGCGAGACTGGACAAATGGGAGAACAAGGTACCATGGGTTTCATCGGGCCAAAAGGAAGCAGAGGAACTATTGGGTTTatgGGTGCTCCAGGGAAAATGGGTCAGCATGGAGAACCAGGTTTAGTGGGATATGAAGGTCATCAAGGACCACAAGGTCCCATGGGATCCACAGGACCAAAAGGTGAAAAgGGAGAGCCAGGTGATGATGGGAAGGTTGAAGGTCCACGCGGTCCTTTAGGTGACATCGGGCCTGTTGGCAACAGAGGAGAAAGGGGACAGCCAGGTGACCCTGGATACCAAGGTCACGAAGGTGTTCATGGGCAAAGAGGAAACCCAGGGGCTCCTGGACTCCCTGGAAATGCCGGGCCAAAAGGTTTTCCAGGGCCTAAAGGATCCAAAGGCAATAAAGGTGCAAAGGGCAAAAATGGCCCGCGCGGGAAATCTGGAAATCGAGGGTCACCTGGTCCTGTTGGTCTCCCTGGCCCCAGAGGAGTTGTTGGTCGTGAGGGTCCTGAGGGTGATCCTGGGATAGAAGGAACCCTTGGGAAAGATGGAGCTAAAGGAATGCCAGGTGAGCACGGAGGTGATGGGGAGGTTGGTCCACCTGGAAAAGCAGGTCCTCAAGGAAACACGGGTGTATCAGGTCTGCCAGGAATTCAAGGCTCTTTTGGGCCAAAGGGTGAAAGGGGCATCCCTGGCCAAGCTGGACCTCCAGGAAAAAGAGGATTTAATGGGGGAATGGGATTTCCTGGAAAACAAGGTGACCgtggggtcaaaggtcaaccTggtGACTCTGGTGAACAGGGATTTCCTGGAGTTCTTGGAATATTTGGACCAAAGGGGCCTCCTGGAGACCTTGGCCCAGTGGGAATCCAGGGCCCGAAGGGTCCTCAGGGTTTAATGGTGTTTCTTCTTTTAAGGGTATGCAAGGAGTCATCGGACCCGTTGGTATCATTGGGCCTAGTGGTAACCCAGGACAACAAGGAGACAAAGGAAACAGAGGGGAAATGggTGTTCAGGGACCCAGGGGACTTCCAGGTCCTCGTGGACCACCTGGACCTCCAGGGCTTCCTGGTGTATCTCTCTCTCATGAAAGTGAAGCTCTTGGTGCTGCTTTAGTTATGGATTCCCGCTCCACTTTACGGTCCAAGACATATGAAGATACAGACCCTCTAATGCTGGACCAGGGAAGCCAAATCTTTAAGACTCTTCGCTACCTCAGCACTCTGATCCACAGCATAAAGAATCCTCTGGGAACACAGGAGAATCCTGCCAGAATGTGCAGAGAT

Function

symbol description
col27a1b Predicted to be an extracellular matrix structural constituent. Acts upstream of or within bone mineralization; notochord morphogenesis; and skeletal system development. Predicted to be located in extracellular region. Predicted to be part of collagen trimer. Predicted to be active in extracellular matrix and extracellular space. Is expressed in cranial cartilage; notochord; and notochord posterior region. Orthologous to human COL27A1 (collagen type XXVII alpha 1 chain).
col27a1 An extracellular matrix structural constituent conferring tensile strength. Predicted to be involved in extracellular matrix organization. Predicted to act upstream of or within growth plate cartilage chondrocyte development. Located in collagen-containing extracellular matrix.

NR:

description
PREDICTED: collagen alpha-1(XXVII) chain B isoform X1

GO:

id name namespace
GO:0001501 skeletal system development biological_process
GO:0048570 notochord morphogenesis biological_process
GO:0030282 bone mineralization biological_process
GO:0005581 collagen trimer cellular_component
GO:0046872 metal ion binding molecular_function
GO:0005201 extracellular matrix structural constituent molecular_function

KEGG:

id description
K19721 COL5AS; collagen type V/XI/XXIV/XXVII, alpha

RNA

RNA id representative length rna type GC content exon number start site end site
TU56081 False 232 lncRNA 0.56 5 19988284 19998252
XM_043238756.1 True 7098 mRNA 0.48 61 19967577 20035380
XM_043238757.1 False 4961 mRNA 0.53 58 19967577 20032444

Neighbor

gene id symbol gene type direction distance location
LOC122345916 NA coding upstream 6910 19954455 ~ 19960667 (+)
LOC122346028 LOC107672526 coding upstream 102626 19860951 ~ 19864951 (+)
camsap1b LOC107720249,LOC107552625,LOC107672541 coding upstream 107417 19837755 ~ 19860160 (+)
notch1b LOC107720248,LOC107567148,LOC107699763,LOC107672539,LOC107745520 coding upstream 134723 19794796 ~ 19832854 (+)
adamtsl2 adamtsl2,LOC107699701 coding upstream 208296 19744545 ~ 19759281 (+)
sh2d3cb sh2d3c,LOC107731039 coding downstream 3591 20038971 ~ 20047598 (+)
tor2a tor2a,LOC107699771,LOC107731016,LOC107552620,LOC107587655,LOC107672551 coding downstream 12745 20048125 ~ 20051547 (+)
inpp5e LOC107720240,LOC107552629,LOC107699774,LOC107672555,LOC107731045,LOC107587653 coding downstream 28320 20063700 ~ 20071214 (+)
LOC122345861 LOC107552612,LOC107576533,LOC107731014 coding downstream 44332 20079712 ~ 20095266 (+)
lhx6b si:ch211-236k19.2,LOC107731013,LOC107672524,LOC107580313 coding downstream 76940 20112320 ~ 20115838 (+)
G37958 LOC107745529,LOC107672542,LOC107720246,LOC107552607 non-coding upstream 93433 19873242 ~ 19874144 (+)
G37956 NA non-coding upstream 100179 19794443 ~ 19867398 (+)
G37951 NA non-coding upstream 207373 19759711 ~ 19760204 (+)
G37843 NA non-coding upstream 320502 19594070 ~ 19647075 (+)
G37734 NA non-coding upstream 679249 19288016 ~ 19288328 (+)
G38082 NA non-coding downstream 92021 20127401 ~ 20392624 (+)
G38091 LOC107699781,LOC107552636,LOC107587661,LOC107672574 non-coding downstream 135594 20170974 ~ 20552306 (+)
G38107 LOC107740807,LOC107552623,LOC107665026,LOC107731020,LOC107672533 non-coding downstream 268318 20303698 ~ 20684387 (+)
LOC122345857 NA non-coding downstream 284462 20319842 ~ 20320418 (+)
G38112 LOC107552640,LOC107740808,LOC107731062,LOC107665013,LOC107672520,LOC559520,LOC107587663 non-coding downstream 287280 20322660 ~ 20324555 (+)
nrarpb nrarpb,nrarpa,nrarp,LOC108255347,LOC107595556 other upstream 257507 19707288 ~ 19710070 (+)
msh3 msh3,LOC107720281 other upstream 953477 18962322 ~ 19014100 (+)
G37626 LOC107720210 other upstream 1026682 18938813 ~ 18940895 (+)
arsk arsk,LOC107703223,LOC107720292,LOC107756297 other upstream 1119903 18842819 ~ 18847674 (+)
LOC122345691 NA other upstream 2440133 17526024 ~ 17527444 (+)
lix1 lix1,LOC107552634,LOC107699708,LOC107587723,LOC107672536 other downstream 107903 20143283 ~ 20151686 (+)
G38092 LOC107699781,LOC107552636,LOC107587661,LOC107672574 other downstream 149655 20185035 ~ 20513916 (+)
LOC122345823 LOC107740804,LOC107665032,LOC108255802,LOC107672563,LOC107731037 other downstream 249237 20284617 ~ 20297222 (+)
LOC122345834 lix1,LOC107587723,LOC107672536,LOC107699708,LOC107552634 other downstream 372388 20407768 ~ 20416507 (+)
G38094 olfm1a,LOC107672574,LOC107587661,LOC107552636 other downstream 523447 20558827 ~ 20562352 (+)

Expression


Co-expression Network