G38430


Basic Information

Item Value
gene id G38430
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 21867128 ~ 21867459 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU56857
CAGGGGTCGGCAACCTTTTTTATCAAAAGAGCCACTTTGTGTGAGCCACTCCCCCCCCCGGAGCCGCAAAAAATTACAGAGTTTATAAAGTTCTAAAAGACGGCTGCTGACGttgatgtgaaatatattttaagtgacaaactataaaaaaaaactttattagatGGTATCAACTAAAACCCCAGAGGAATTGTGCAACAAAATGAGCACATAATgacgataataaaaaaaaaaaaaaaaaccttctatgtttttttgtcaCGGCCATCGGGAGCCATTACAAGGAGGCTGAAGAGCCGCATGCGGCTCCAGAGCCGCAGGTTGCCTACCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56857 True 332 lncRNA 0.42 1 21867128 21867459

Neighbor

gene id symbol gene type direction distance location
napaa napaa,LOC107740516,LOC107587681,LOC107681892,LOC108428316,LOC103043684 coding upstream 14706 21848118 ~ 21852422 (+)
LOC122345101 spata22,LOC107712134,LOC107685763,LOC107595512 coding upstream 163033 21700618 ~ 21704095 (+)
c5h11orf54 zgc:85789,c28h11orf54,LOC107709398,LOC107587676,LOC107690214,LOC107685814,LOC107712137 coding upstream 167855 21695535 ~ 21699273 (+)
LOC122344666 specc1,LOC107712164,LOC107665038,LOC107731042,LOC107688619,LOC107587672 coding upstream 445832 21381997 ~ 21421296 (+)
LOC122344667 fam57a,LOC107740818,LOC107665040,LOC107731057,LOC107688621,LOC100712488,LOC103354813 coding upstream 487928 21364223 ~ 21379200 (+)
im:7138535 LOC107712132,LOC107685911,LOC107595524,LOC107710720,LOC107587738,LOC107681884 coding downstream 29253 21896712 ~ 21899647 (+)
LOC122344948 LOC107712131,LOC107685893,LOC107595523,LOC107710718,LOC107587739,LOC107681894 coding downstream 33021 21900480 ~ 21907782 (+)
pex12 pex12,LOC107681885,LOC107710733,LOC107685880,LOC107587685,LOC107712128 coding downstream 88754 21956213 ~ 21959029 (+)
ncf1 ncf1,LOC107712127,LOC107685544,LOC107595520,LOC107710714,LOC107681886 coding downstream 141147 22008606 ~ 22012337 (+)
rcc1l wbscr16,LOC107587689,LOC107712126,LOC107710726,LOC107681900,LOC107595519 coding downstream 144988 22012447 ~ 22020889 (+)
G38403 NA non-coding upstream 37444 21821478 ~ 21829684 (+)
G38302 NA non-coding upstream 317875 21489667 ~ 21549253 (+)
LOC122345943 NA non-coding upstream 369866 21496444 ~ 21497262 (+)
G38297 NA non-coding upstream 441672 21289931 ~ 21425456 (+)
LOC122345965 NA non-coding upstream 868040 20981027 ~ 20999088 (+)
G38404 hnrnpul1,LOC107681881,LOC107712123,LOC107595510,LOC107685667,LOC107587719 non-coding downstream 21463 21888922 ~ 21892405 (+)
G38439 rasl10b,LOC107685904,LOC107595522,LOC107710719,LOC107681887,LOC107587740 non-coding downstream 41306 21908765 ~ 21912109 (+)
G38440 NA non-coding downstream 45331 21912790 ~ 21914263 (+)
G38441 NA non-coding downstream 47197 21914656 ~ 21915886 (+)
G38442 NA non-coding downstream 48633 21916092 ~ 21917127 (+)
znf541 LOC107712155,LOC107685724,LOC107595525,LOC107681879 other upstream 24934 21836349 ~ 21842194 (+)
G38318 aspa,LOC107665049,LOC107712162,LOC107595485,LOC107688617,LOC107587675,LOC107731059 other upstream 181509 21683279 ~ 21685619 (+)
adora2b adora2b,LOC107712140,LOC107665025,LOC107595487,LOC107688642,LOC107731023,LOC107587731 other upstream 596254 21261554 ~ 21270874 (+)
LOC122345215 specc1,LOC107712164,LOC107665038,LOC107731042,LOC107688619,LOC107587672 other upstream 606413 21180444 ~ 21260715 (+)
tecta tecta,LOC107665015,LOC107688634,LOC106603728 other upstream 746288 21084948 ~ 21120840 (+)
G38415 hnrnpul1,hnrnpul1l,LOC107685667,LOC107712123,LOC107587719,LOC107595510,LOC107681881 other downstream 26704 21894163 ~ 21896015 (+)
arhgef12b tmem136b,tmem136,LOC107600774,LOC107691755,LOC107556431,LOC107744340,LOC107664298,LOC108428603,LOC107691754,LOC107600769 other downstream 1111345 22978804 ~ 23045715 (+)
G38714 hepacam,LOC107712936,LOC107600797,LOC107556427,LOC107664307,LOC107744315 other downstream 1238453 23105912 ~ 23108183 (+)
G38721 NA other downstream 1316767 23184226 ~ 23195697 (+)
G38783 mia,LOC107691739,LOC107743804,LOC107691742 other downstream 1688639 23556098 ~ 23561143 (+)

Expression


Co-expression Network