G40677


Basic Information

Item Value
gene id G40677
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30484016 ~ 30484242 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU60188
ttttatcctTCTGTACCATGGATAATGTCATTTAACAAACTTCTCTTGGCAGAGTATACAGTAGAGAATGAGTCAGCGCACACATAATCGCTAGAACACACAAAGCATGGtagaaaaataaagactttatgTTGCATGTATAGATGCGGTCAATATGCAGTAACtagattatatttaacaaaatgtaggTTGATTGCTCTCAAGGGTTTGCTTCATCTTCACCTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60188 True 227 lncRNA 0.35 1 30484016 30484242

Neighbor

gene id symbol gene type direction distance location
trabd2a trabd2a,LOC107558059,LOC107570885,LOC107717329 coding downstream 319999 30122226 ~ 30164017 (-)
june LOC107687249,LOC107721038,LOC107563389,LOC107684195,LOC107735627 coding downstream 449804 30027830 ~ 30034212 (-)
thap1 thap1,LOC107563391,LOC107684196,LOC107687269,LOC107558071 coding downstream 472007 30006999 ~ 30012009 (-)
LOC122344968 mob3b,LOC107558072,LOC107563392,LOC107721040,LOC108414757 coding downstream 478047 29997436 ~ 30005969 (-)
LOC122344964 LOC107721044,LOC107563395,LOC107558067 coding downstream 513107 29967407 ~ 29970909 (-)
mbd2 mbd2,LOC107717343,LOC107565141,LOC108438699,LOC108260323,LOC105902559 coding upstream 6789 30491031 ~ 30511279 (-)
LOC122345124 si:zfos-128g4.1,LOC107675886,LOC107577831 coding upstream 36364 30520606 ~ 30523419 (-)
LOC122345715 LOC107687242,LOC107717337,LOC107558070 coding upstream 51592 30535834 ~ 30537915 (-)
LOC122344973 NA coding upstream 56255 30540497 ~ 30542440 (-)
LOC122344972 NA coding upstream 92046 30576288 ~ 30580328 (-)
G40676 NA non-coding downstream 1790 30482021 ~ 30482226 (-)
G40654 NA non-coding downstream 64609 30297394 ~ 30419407 (-)
G40418 NA non-coding downstream 366153 30116408 ~ 30117863 (-)
G40422 NA non-coding downstream 377278 30105842 ~ 30106738 (-)
LOC122345788 NA non-coding downstream 429219 30053612 ~ 30054797 (-)
G40671 NA non-coding upstream 6272 30490514 ~ 30490878 (-)
G40680 NA non-coding upstream 20554 30504796 ~ 30512970 (-)
G40684 NA non-coding upstream 31823 30516065 ~ 30518455 (-)
G40670 ythdc2 non-coding upstream 79875 30564117 ~ 30564377 (-)
G40672 NA non-coding upstream 81442 30565684 ~ 30566156 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 390440 30087966 ~ 30093576 (-)
LOC122344966 LOC107749532,LOC107566852,LOC107742171,LOC107565644,LOC107690083 other downstream 555341 29924702 ~ 29928675 (-)
eng LOC107562335,LOC107704777,LOC107741503 other downstream 828955 29614719 ~ 29655061 (-)
G40182 brinp1,LOC107715673,LOC107674904 other downstream 993812 29460585 ~ 29490204 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other downstream 1157901 29323982 ~ 29326115 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other upstream 106601 30590843 ~ 30613141 (-)
G40711 NA other upstream 146786 30631028 ~ 30733360 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other upstream 305391 30789633 ~ 30792719 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other upstream 333490 30817732 ~ 30826358 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 847107 31331349 ~ 31350449 (-)

Expression


Co-expression Network