LOC122344631


Basic Information

Item Value
gene id LOC122344631
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10089576 ~ 10089947 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238151.1
ATGAAATCCTTGGCTTGTGGAACTTGGGTAAGCAGTCACTTGTGCTCATTCAGAAACAATATTGCCCTGATCAAGTTGTCCGAGCCTGTGACACTGAGTGACACTGTTCAGCTGGGCTGTGTTCCTACTGCTGGCTCCATCCTTGACAACAACTACCCCTGCTATATTTCAGGCTGGGGAAGACTCTCCACTGGAGGTCCTTTCCCTGTGAAACTGCAGGAAGCACTGATGCCCGCTGTGGATCACGCCACCTGCACCAGGTCTGACTGGTGGGGTTCCACTGTCATGGAAAGCATGGTTTGTGCTGGTGGAGATTGTGTTGTCGCTGGTGCAATGTGA

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238151.1 True 339 mRNA 0.52 2 10089576 10089947

Neighbor

gene id symbol gene type direction distance location
fam151b fam151b,LOC107744481,LOC107673370,LOC107672699 coding upstream 15614 10070450 ~ 10073962 (+)
ccdc125 LOC107673377,LOC107595019,LOC107672719,LOC107592408,LOC107752495 coding upstream 19742 10066064 ~ 10069834 (+)
rad17 rad17,LOC107672793,LOC107673420,LOC107595018,LOC107592326,LOC107752497 coding upstream 24013 10060414 ~ 10065563 (+)
erap1b erap1b,LOC107752503,LOC107744480,LOC107673365,LOC107592380 coding upstream 47266 10034953 ~ 10042310 (+)
arvcfb arvcfb,LOC107595013,LOC107744414,LOC107673389,LOC107672748 coding upstream 61539 9863630 ~ 10028037 (+)
LOC122346129 ela3l,LOC107592405,LOC107672799 coding downstream 6987 10096934 ~ 10100280 (+)
c5h9orf85 zgc:101016,LOC107599915,LOC107744485,LOC107673354,LOC103371459,LOC101078288 coding downstream 183076 10273023 ~ 10275197 (+)
gda gda,LOC107673426,LOC107672768 coding downstream 186920 10276867 ~ 10282029 (+)
tmc1 tmc1,LOC107672717,LOC107738298,LOC107592401,LOC107599958,LOC107744426 coding downstream 207185 10297132 ~ 10306693 (+)
tmc2b tmc2b,LOC107744486,LOC108255389,LOC108434469,LOC103356627 coding downstream 219662 10309609 ~ 10318604 (+)
G34911 NA non-coding upstream 55621 10032439 ~ 10033955 (+)
G34905 NA non-coding upstream 60755 10008047 ~ 10028821 (+)
G34861 LOC107709872,LOC107595007,LOC107673413 non-coding upstream 278726 9808449 ~ 9810850 (+)
G34842 NA non-coding upstream 321755 9767294 ~ 9767821 (+)
G34841 NA non-coding upstream 323227 9765970 ~ 9766349 (+)
G34941 NA non-coding downstream 12938 10102885 ~ 10106441 (+)
G34957 abhd17b,LOC102776450,LOC107592319,LOC107672759 non-coding downstream 171665 10261612 ~ 10264441 (+)
G34956 LOC107672769,LOC107592318,LOC107599914,LOC107738291,LOC107673406 non-coding downstream 195820 10285767 ~ 10287373 (+)
G34959 NA non-coding downstream 198477 10288424 ~ 10291861 (+)
G35040 NA non-coding downstream 235919 10325866 ~ 10326714 (+)
si:ch211-102c2.4 NA other upstream 290218 9796381 ~ 9799358 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other upstream 1218058 8864202 ~ 8871518 (+)
snx19a snx19a,LOC107597619,LOC107681657 other upstream 1784130 8289720 ~ 8305446 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other upstream 2078977 8001578 ~ 8010599 (+)
p2rx1 p2rx1,LOC107598068,LOC107712377,LOC107664512,LOC107587372 other upstream 2291608 7754074 ~ 7797968 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other downstream 627584 10717531 ~ 10736059 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other downstream 836876 10926823 ~ 10933753 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other downstream 956532 11046479 ~ 11064446 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other downstream 1046276 11136223 ~ 11150225 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other downstream 1176695 11266642 ~ 11303431 (+)

Expression


Co-expression Network