LOC122344704


Basic Information

Item Value
gene id LOC122344704
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15500502 ~ 15504606 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238250.1
CTAGCGATTTTGCTTCTCTGCGTGAGCTTATACTTCTTGAGGATTTCAAGAAGTGTTTACCTGAACGCATCGTATTATATCTAAATGAGCAAAAGGTGACGACGTTATCgattgctgctgttttggcCGATGAATTTGCGCTAACGCATAAAAACGTGTTTTCTGTTGTGCGCGGTGACAGGCCTGGTGTTGTGGCTGCATCTTTGAATACTGTACCGGCCAAGATCAATGGGGAACGGTTTAGAGAAAAACGTGAGTGTTTTTATTGCCATAAAGTAGGTCATGTCATTGCTGACTGTATGGtattaaagagaaaatcaaATCCGGTTAAAACGCAGTCAGTAGGTCTTATCAAAACTTCTTTAGTACAGGCTGATTCAGGGTATGAACCATTTTTGTTAGATGGTTTTGTGTCTTTCAGTGGTCAACTTGAGGACCGAGTTGCAGTGAGAGTGTTGAGGGACACTGGTGCTGCTCGCTCGTTGATGCGCGGTGATGTTTTGCCTTTCTCCAAGGAGTCTGGTTTGGATTCCAGCATTTTAGTGCAAGGTATTAGTATGGAAGTAATAAAAGTCCCATTACATCGAGTACATTTGCAATCTGAGCTTGTAACTGGCTTTGTTGACGTGGGGGTACGACCTACCTTACCAGTTCCTGGTATTGAGTTCATTCTGGGTAATGATTTAGCAGGGGGTCGTGTGTTGCCAGTTTTAGAGGTTTTGGATAATCCTGTGATTACTCCTACTTCAGCAGAATTGACTCAGAGATTTCCAGAAGTTTTCCCAGCGTGTGTCCTGACTCGGTCTCAGACGAAGAGGATGGGAACGGAGTTTACACTAGATGACACCTTCATGTGCACTGATCATCCAGTTCAAGTTGATGTGGAGTCTGTCAGTGTCAAAGAGCATCCATGCCAGGAGTCAGAATCAGAACAGAGGTGGATGCTAGTGCCGTTGGAGCTGGTGCTGTGCTCTTACAGGAAGATAAAGAAGgTTTCTTTATTGGTTCGCCTGACCATCTGGGAGGATCTGGATGTCCAATCAGGAGACGCGATGCAGAATTTAAATGGAATTGGTGTGCATGTTTCGGGGGCGGTGGAGTTGTGGCTAGCTTCACCGCACCTCATTTGTGCTGTGGTTTTCTTTTGA

Function

GO:

id name namespace
GO:0010942 positive regulation of cell death biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0043068 positive regulation of programmed cell death biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238250.1 True 1148 mRNA 0.45 3 15500502 15504606

Neighbor

gene id symbol gene type direction distance location
LOC122345300 vcp,LOC107681079,LOC107708640,LOC103357444 coding upstream 29085 15463434 ~ 15471417 (+)
fancg fancg,LOC107552563,LOC107746873,LOC107602006,LOC107708626,LOC107681392 coding upstream 37547 15457352 ~ 15462955 (+)
pias2 LOC107681092,LOC107746809,LOC107676652 coding upstream 49980 15444366 ~ 15450522 (+)
arid3c arid3c,LOC107708619,LOC107681123,LOC107601998,LOC107746872,LOC103046366,LOC107552548 coding upstream 65633 15374137 ~ 15434869 (+)
sub1b sub1b,sub1,LOC107552599,LOC107602008,LOC107746806,LOC107661272 coding upstream 188836 15308839 ~ 15311666 (+)
cfap251 LOC107746856,LOC107681387,LOC107577995 coding downstream 51316 15555922 ~ 15563758 (+)
bcl7a LOC107552594,LOC107746817,LOC107680981,LOC107708648,LOC107553587,LOC107676671 coding downstream 59540 15564146 ~ 15568246 (+)
pigl pigl,LOC107746821,LOC107680910,LOC107552588,LOC107718344,LOC107676669,LOC107575753 coding downstream 180197 15684803 ~ 15705172 (+)
ubb ubb,UBC,LOC107553588 coding downstream 205373 15709979 ~ 15712715 (+)
p2rx5 LOC107680863,LOC107746824,LOC107552584,LOC107676654,LOC107718329,LOC107553591 coding downstream 213260 15717866 ~ 15726181 (+)
G36847 NA non-coding upstream 5552 15494658 ~ 15494950 (+)
G36830 eef2l2,LOC108414462,LOC107708620,LOC107676651,LOC108255789,LOC107681082,LOC107746808,LOC107552597,LOC107601997,LOC107708638 non-coding upstream 23470 15454480 ~ 15477032 (+)
G36793 NA non-coding upstream 157638 15327099 ~ 15342864 (+)
G36765 NA non-coding upstream 200146 15295704 ~ 15300356 (+)
G36762 NA non-coding upstream 204946 15275657 ~ 15295556 (+)
G36852 NA non-coding downstream 568 15505174 ~ 15505753 (+)
G36926 NA non-coding downstream 73512 15578118 ~ 15583662 (+)
G36918 LOC107746818,LOC107680961,LOC107552589 non-coding downstream 90842 15595448 ~ 15600161 (+)
G36937 LOC107680951,LOC107553567,LOC107746860,LOC107552540,LOC107718342,LOC107676644 non-coding downstream 117219 15621825 ~ 15623293 (+)
G36948 NA non-coding downstream 138689 15643295 ~ 15647107 (+)
G36640 NA other upstream 780015 14718532 ~ 14720487 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other upstream 847591 14645945 ~ 14652911 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 1150511 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 1162737 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 1195198 14300043 ~ 14305304 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 887191 16391797 ~ 16395562 (+)
G37227 NA other downstream 970102 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 982014 16486620 ~ 16561741 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other downstream 1860243 17364849 ~ 17372859 (+)
LOC122345691 NA other downstream 2021418 17526024 ~ 17527444 (+)

Expression


Co-expression Network