LOC122344894 (cyb5d2,LOC107664515,LOC107712371,LOC107597422,LOC107664398)


Basic Information

Item Value
gene id LOC122344894
gene name cyb5d2,LOC107664515,LOC107712371,LOC107597422,LOC107664398
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7975083 ~ 7976638 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238515.1
ACCCGGAAACGTGTTGACAAATGTGATTTTGTTCATGCCGATGCGCATTACGACACTTATTTGAAATGCTGACTGCTTGACATTTCGTCCTCGTCTTTATACACCGTATGCACAATGCTGAAATATTTGGTAGCTCTTATATCAATGGTGTTGGCCGTGTGGACGGTGCCGGAGTGGCTCACGTTCCCAATCTACGGCAGCGTAGTGAACGTGCTGGAGTCTTGGCTGCGGCAGCAGGTCGGTGATAAGCCAGCATCTGCTCCGGGGCGCTTGCTGACCGAAGATGAGCTGTCTTTATACAATGGAGAAGAGAACAGTAAAGGATTGTACCTGGCCATCTTAGGACAGGTGTTTGACGTTGAAAAGGGGCGGAAACATTACGGCCCTGGCGGCGGGTATCATTTCTTTACAGGGAAAGACGCGTCAAGGGCGTTTATTACAGGGGATTTCACAGAGACCGGCTTAAGTAGCGACGTCTCTGATTTCACGGACTCCCAGATTGTGGCTCTTTATGACTGGCTGTCATTTTATCAGAAGGACTACACTCCAGTAGGTAAACTGATGGGCCGATTCTACACAGAAACCGGGCAGCCCACTGATGCTTTGTTACACGTTGAGGCTTTCTTGTCTGAGGGGTTGAAGAAAAAGGCCCAGGCTCAGAGTGAAATGCAGCTGTACCCAGCCTGCAACTCGGAGTGGAGCGAAGCCAGCGGGGGACGTGTATGGTGCTCTACAATGAgTGGTGGCATTCACAGGGACTGGGTTGGAGTTCCCAGAATGCTCTTCTCCCCTGGGTCTGGCCATTCCCGATGCGTGTGCATACGACTGTCAGATCCTGTTCACGTCGAGAACCGAAACCTCAGAGAGTACAAAGACTGTCCTCCTCATGCAGAGTCCTGTCGCGTCACCAAAGACTGAGCTACAAGTATACATAACActatttgcatttcatttaacaattttttcatttcaattgatTGTAACAGGCACATTCCAAGTGACTGATGCTGCTTGTTATGtttctaatttaattcattctGTTGCAGTTTGTGGCCAAGTATATTACTCGTGCCATTAAAGATTGTTCAATAAGacaa

Function

symbol description
cyb5d2 Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Orthologous to human CYB5D2 (cytochrome b5 domain containing 2).

NR:

description
PREDICTED: neuferricin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238515.1 True 1097 mRNA 0.48 4 7975083 7976638

Neighbor

gene id symbol gene type direction distance location
sh3glb2b sh3glb2b,LOC107748508,LOC107681863,LOC107664415,LOC107597332 coding upstream 271912 7683732 ~ 7703171 (+)
pip5kl1 pip5kl1,LOC107598405,LOC107681849,LOC107712381,LOC107587371,LOC107664401,LOC107748514 coding upstream 291799 7676059 ~ 7683284 (+)
fam102ab fam102a,fam102ab,LOC107681850,LOC107748511,LOC107664417 coding upstream 302629 7643129 ~ 7672454 (+)
pkn3 LOC107681845,LOC107737478,LOC107587363,LOC107597294,LOC107712357,LOC107664395 coding upstream 361195 7599502 ~ 7613888 (+)
coro1cb LOC107723343,LOC107597269,LOC107681860,LOC107587361,LOC107740952 coding upstream 383459 7581530 ~ 7591624 (+)
spns2 spns2,LOC107677434,LOC107597455,LOC107722776,LOC107587355,LOC106602867 coding downstream 49102 8025740 ~ 8090672 (+)
ftr82 LOC107712362,LOC107664526,LOC107597500,LOC107677429,LOC107587354,LOC107722781 coding downstream 143551 8120189 ~ 8126047 (+)
ift22 ift22,LOC107597505,LOC107712360,LOC107664522,LOC107677430,LOC107722786,LOC107587352 coding downstream 151025 8127663 ~ 8128952 (+)
tcnba tcnl coding downstream 180252 8156890 ~ 8158237 (+)
tcnbb NA coding downstream 183269 8159907 ~ 8161393 (+)
G34104 NA non-coding upstream 40384 7865167 ~ 7934699 (+)
LOC122345061 NA non-coding upstream 43735 7912092 ~ 7931348 (+)
G34075 LOC107664520,LOC107748505,LOC107597375,LOC107712354,LOC107664410 non-coding upstream 194159 7717973 ~ 7780924 (+)
LOC122345618 NA non-coding upstream 249260 7713614 ~ 7725823 (+)
G34071 NA non-coding upstream 263905 7710303 ~ 7711178 (+)
G34116 NA non-coding downstream 16514 7993152 ~ 7996158 (+)
G34163 NA non-coding downstream 152467 8129105 ~ 8131150 (+)
G34358 NA non-coding downstream 451845 8428483 ~ 8431274 (+)
G34383 NA non-coding downstream 470160 8446798 ~ 8447021 (+)
G34384 NA non-coding downstream 471214 8447852 ~ 8448278 (+)
p2rx1 p2rx1,LOC107598068,LOC107712377,LOC107664512,LOC107587372 other upstream 177115 7754074 ~ 7797968 (+)
dpm2 dpm2,LOC107664400,LOC107712384,LOC107681851,LOC107598396,LOC107587395 other upstream 300447 7672827 ~ 7674636 (+)
tmem119b LOC107681861,LOC107597286,LOC107587378,LOC107735096 other upstream 377563 7592963 ~ 7597520 (+)
svopb LOC107723362,LOC107681854,LOC107598053 other upstream 407820 7558940 ~ 7567263 (+)
G33891 myhz1.2,myhz2,myhz1.1,ns:zf-e68,myhc4,mmyhl1,myhb,mmyhl2,LOC107723326,LOC105016875,LOC105016873,LOC106565367,LOC107088603,LOC107384188,LOC107093413,LOC103461378,LOC108241321,LOC107083053,LOC107083052,LOC107378336,LOC106938339,LOC106596646,LOC106596400,LOC106585883,LOC106597527,LOC106594844,LOC108261437,LOC106595486,LOC106598139,LOC108261508,LOC103379498,LOC103379499,LOC108444093,LOC101482140,LOC107660779,LOC108443910,LOC108415768 other upstream 454842 7420140 ~ 7520241 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other downstream 24940 8001578 ~ 8010599 (+)
snx19a snx19a,LOC107597619,LOC107681657 other downstream 313082 8289720 ~ 8305446 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other downstream 887564 8864202 ~ 8871518 (+)
si:ch211-102c2.4 NA other downstream 1819743 9796381 ~ 9799358 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other downstream 2087579 10064217 ~ 10139733 (+)

Expression


Co-expression Network