zgc:63972 (zgc:63972,LOC107710753,LOC107598209,LOC107726290,LOC107587483,LOC107700896)


Basic Information

Item Value
gene id zgc:63972
gene name zgc:63972,LOC107710753,LOC107598209,LOC107726290,LOC107587483,LOC107700896
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 6639247 ~ 6648360 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238523.1
tcgctaagaaaatatgctatttttaatttagtgcaaATAGCTGCTGCCTCACAAAAAATATCTCAGTATCTGtattaaaaacagtgttttcaAAAAATCAGCAAGGCAAAACTATTACAAAATTCATCCTCTAgagtttttaatgtataaacgtGAGGCTGTAAACCTAGCTCATTTGAAGATGAATTTGGGTCAGTGGTTTGAATGGCATACATGCATATGTGGACCTCAAAGACCGCTCAGCAGATACACGTCAAACATTTTCAGTCACAAAGAAACCTAACTGCTGATACGAAGCATGATACAGCAGGCATCAgcaaaacactttaaatgtgaCAAGGTTTcttgaaataaaacagttgcTCTTTATTTGTGCTGTACTGTATAGTATTGTTATCAACAGACTGTTATGCTTGAATTATATGCCAGAAATAGCAGTAAAGACTGACTGCTTTACAACAGGCCTAGCCTATGTTATTACCTAATTTATTTTCCACCTTTCGGCTGAATATGctgaataaaacacttttaactGCTAATAGTTGATCGGTTTCATCAGCAGTTGTTTTGTGaacaattaataatatgaaatagattatttctaaaaataataataataaataaataaataaaatgtaggtAATTTAACTCCCACAAAGCCTATAGAAAACGCATAATATAGCGACATCTAGAGGTGATTAAAAGAAGGTAATTAGCGTTATATTTTTTCCCAAAATGTCTTCTGCAACCCGGtgttatgatttttatatttgtatttttatatttatatttgatttttcttttatgccaaaattcaTCAGGATATTAGATAACTATCGCgttccatgaatatattttgtacacCTTAAATATACCAAAACTTATTAGTAGTCTATATGCATTGCCAAGGATTTTAAATGCTCAACTTTTGGccttttagattatttttacaCCCTCATATTGCAGATTTTACCTTTTTAACGCCACTTAATGGCCAGTTATGTAGCGCGCGCGTTACAGGTTTTAACCCACATGCAGTTTCGAGCTTTTGCAAACAAACCCGATTTCTTTGTGATGAATTGAAACAATCGAAAAAAACGCGTCCGTTGTCCACGACGGACTCTACCAGCAGCCAGAAGCAGCACTTAAGTTTATTAGGTTTCCAATCCTCTTATGATGAGACGCGCGCGCGCCGCTCTTGATTGGAAGCCCCGGCATCCGGATACGAGCGTCGCTCAATCAGCATCCGGCGCGACACGCAGCCGCTTTGGGAAGCGCTCGGACTTCCCGAACTGCCCGACGGACTTTTATGGAAGTGAGATGAACCCGCTGGACACCTGCCGAGACGGTCCTCCCGCGAAACGCGCAGAGTAGCCCGCGCTTCTCCGGCCGCGCGTGAAATAATTATGCAAGGGAACGAACCGGGTTGCTCGTGCCAGCGGTATCCCAAGGACGTAATGACTTCGGCTGTTCCTCGATCGGGATTCGTCGTCTTTTGCGTGATTTTAGTCCTGGCTTGTGCCCTCTACCCTGTGCTGAAATCATTGTGTGACCAGATTCACTCTGCTGTCACAGGAAGCTATGTGGCAGGATATCATTCGGTGCTGCTTGTCAACTGTCCCACAGAACAAACCGCTAGAGACATCGGAAgGAGCATCATGGAGAAAAGGCTGGCAGCATGCGTGAATATATTTCCTCGCACCAGTACCATGTACTACTGGAAAGGGGAGATACGAGATACCTCAGAAATACTGCTGCTTGTGAGGACAAGAACATCTCTGGTGCAGAGACTTGTGACCTATATAAAAGCTGTGCATCCATACGACATTCCAGAAATTATCAGTTTTCCCATCGAAGATGGAAGTCAGCATTACTTGAAGTGGATGGAAGAAGCCGTCACTGATATTTGACACATCGTTCTGCGATCCAGAAGAAAAGCTCTCTTGTTAAAGGAACATGAGCTAATTCTCAGGTTAATGGGAACCCCGGCCCACACAATGAATGTCTGTGAATATAAAGATCAGTTGTATACATTTACTGAACGGATGTGTGGAAAGGGACTGCTCTGATGTGTTTTTTACAAGtactattacatttatgcatttaagcaGATGCTTtaatccaaagcaacttacaataGAATAATTTTTTAGAGCCAACAATGTTTATAGTATGCCAGGTTTAATAAAACGCTAAATTTGGAAGCAAAGTAGAGGAGAAATGCAGAGaagaaaagatttattttatttttcatctttaaaaggGCTTATCATTTTCAAGATGCCTTTCGTACTTGCCTGGATGAGACTGTTACTGTGGTCCGTTTCAGTGACCTGAGGCATTGTTGCCTGTAAACTCTGCCTGTTTATTGAGCGCTTTGTCGTTAATCGCTTCATTACGAAGCGTAAAACAAAAGCTAATATGAATTCGTTTAATTGTTCAAATATGCGCGTTTATACAACTTATTTCTCGTGGTTGGTTAAATGTTACGTAGAGGTTGAGCAGAATTTCGAGTGCTcaagtttattattttgttatagaATGTAAATGTTGATGTTCTTGATACTGCATAAGagtaaagaaaacataaatctAAAAGGTCAGTTATGTTGTGTTTAAACGTCATATTAAGCTCCAGAAGGTGTATTGgggcttacacacacacacacacacacacacacacacaaatataaggAAGTTTAAGTAATTAGCTCCAGGAGCAATGTGTCAACACTTATGGCCAAAACATCAGCTGTTGCTAAAACCCTTTCAAGCCTCttaattaaatagtttataAATATTACGGTTGCCCATACATTAGCACATGGGTGCAATTAAAAGGGGTCTTACAGTAGATGctgtaaatgttattaaatataaatatgctttcaAAATAGTTCAGATGAAATCGTCTGGGTCTCGCGTATCTtacgtctttttttttctacacaaaAGAACGACTTCCAGTTAGTTCATCAGGCACGAGCGAATCTGAATCTTTCCGTTCCCTCAAATAATGCAACACTCAGAATCGTCAAATTGAGCCGAATGACAAATGCAGTTTTGAATAGGTGTATGCCCGCACTCGTCTGGCTTTTGAAACGGTGTTTCCGGAAACTGGGAAAACACAATAGAAGTGCAGATGTGAGGAAGTGCTTTTGTTTGCTAGGATTTGCTAAAATCCAGTCACGATGAAGTCATTAATCTGACCGCTCACCTAGTAACCTACGATGACATGCCGATTTTAAGCATAGGCagcttctttttaaataacacgTGTGCggtgtgttttataaatagtACGATATTACTCTGTGTCTGTGAtatcaactttatttttaaagctccTTATGTCTAACATTCTACATTTTAGTGTATTGCTTGATTATCAAACCATTCATTAAAGAGAATATCAG

Function

symbol description
zgc:63972 Predicted to enable copper ion binding activity. Predicted to act upstream of or within response to metal ion. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human CUTA (cutA divalent cation tolerance homolog).

NR:

description
protein CutA homolog isoform X1

GO:

id name namespace
GO:0010038 response to metal ion biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238523.1 True 3416 mRNA 0.39 6 6639247 6648360

Neighbor

gene id symbol gene type direction distance location
fibcd1b fibcd1,LOC107739453,LOC108428067,LOC107693814,LOC107596897,LOC105015243,LOC107700935 coding upstream 47667 6522536 ~ 6591580 (+)
arhgef28a arhgef28,LOC107718644,LOC107596821,LOC107757522 coding upstream 476762 6105795 ~ 6162485 (+)
btf3 btf3,LOC107655933 coding upstream 543231 6092247 ~ 6096016 (+)
tmem174 NA coding upstream 606615 6029626 ~ 6032632 (+)
fcho2 fcho2,LOC107655928,LOC107700925 coding upstream 619407 5983148 ~ 6019840 (+)
garnl3 garnl3,si:ch211-182d3.1,LOC107700942,LOC107693837,LOC107710757 coding downstream 209519 6857879 ~ 6915413 (+)
c5h9orf78 zgc:103692,cunh9orf78,LOC107587408,LOC107726294,LOC107710755,LOC107691020,LOC107596954 coding downstream 295005 6943365 ~ 6945577 (+)
rpl7a rpl7a,LOC107691022,LOC107596970,LOC107726288,LOC107693850,LOC100194725 coding downstream 300958 6949318 ~ 6952114 (+)
LOC122346228 NA coding downstream 301539 6949899 ~ 6949965 (+)
LOC122346219 NA coding downstream 301851 6950211 ~ 6950281 (+)
G33665 NA non-coding upstream 144717 6475701 ~ 6494530 (+)
G33619 NA non-coding upstream 403606 6232297 ~ 6235641 (+)
G33506 NA non-coding upstream 462592 6174621 ~ 6176655 (+)
G33505 NA non-coding upstream 465070 6173850 ~ 6174177 (+)
G33503 NA non-coding upstream 471661 6167363 ~ 6167586 (+)
G33708 NA non-coding downstream 272385 6920745 ~ 6921639 (+)
G33712 NA non-coding downstream 281287 6929647 ~ 6930785 (+)
G33844 NA non-coding downstream 485934 7134294 ~ 7134884 (+)
G33850 NA non-coding downstream 486547 7134907 ~ 7135122 (+)
G33852 NA non-coding downstream 496700 7145060 ~ 7146006 (+)
G33664 NA other upstream 147261 6473347 ~ 6491986 (+)
hexb hexb,LOC107718643,LOC107700931,LOC107655935,LOC107570862 other upstream 383907 6247795 ~ 6255340 (+)
G33494 foxd1,LOC107598200,LOC107718663,LOC107700903,LOC107596217,LOC107757501 other upstream 550685 6087262 ~ 6088562 (+)
tnpo1 tnpo1,LOC107700926,LOC107655929,LOC107596175 other upstream 656431 5959832 ~ 5982816 (+)
myo1ha myo1ha,myo1h,LOC106585663 other upstream 991200 5625267 ~ 5648047 (+)
si:dkey-34e4.1 si:dkey-34e4.1,LOC107700938,LOC107596916,LOC107710760,LOC107587412 other downstream 145005 6793365 ~ 6825366 (+)
kank1b kank1b,LOC107730999,LOC107691025,LOC107597012,LOC107587402 other downstream 330188 6978548 ~ 6988772 (+)
gpr107 LOC107723348,LOC107691037,LOC107597176,LOC107693862,LOC107740935 other downstream 638208 7286568 ~ 7300729 (+)
G33878 c9,LOC107691041 other downstream 690108 7338468 ~ 7344078 (+)
LOC122345182 ns:zf-e68,myhz1.2,myhz1.1,myhz2,myhc4,LOC107598006,LOC103370545,LOC107723326 other downstream 725248 7373608 ~ 7449497 (+)

Expression


Co-expression Network