erap1b (erap1b,LOC107752503,LOC107744480,LOC107673365,LOC107592380)


Basic Information

Item Value
gene id erap1b
gene name erap1b,LOC107752503,LOC107744480,LOC107673365,LOC107592380
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10034953 ~ 10042310 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238610.1
GAGAAgcgcttttattttaaaaaacaacttcCCATGATGCAAATGTTGAAGAATTGTATTTTCACTTTCACATTCTTTGATTAGAATGCACAGCTGAACCAAACCTAACACATTGGAGATTTTAACCGAGAAGCGTAGTTCCTAATCTGTAGTACTGGGCAGCCATGATTCGCTTTGCTCTGCTTGTGAATCTTTTAGTTTTGCCCATTTACCTCTGGGCTGCAGACACTCAAGAGACAACTTTATTTCCCACATCAATTAATGGAGAACCATTCCCGTGGAACAAAATGAGGCTTCCGGACACAGTATTACCCATTCGTTATGATCTCCTTATCCACCCCAACCTCACAAGTTTAGACTTTACTGGAATGGTGCAGATCCAAATTGAGGTCCTTGAAATCACCAAAACAATCATACTGCATAGTAAGGATCTTCACATTTCCAAAGCAAGGTTGCTAGGATCAGACATAGGTCAGCTGCAGGCCCTGAAGGTGCTAGAGTACCCATACTTCCAGCAGATTGCACTTATATCTGAGCATGCAGTGCTGAAGAGAGGCCATGTATATTCAATTCAACTGGAGTTTGCCGCCAACCTCTCTGAGAGCTTTCATGgattttacaaaagcacataTCGTACCAGCAAGGGAGACCTCAGGTTTGTGGCTTCCACGCAGTTTGAGCCAACTAGTGCCCGGGCAGCTTTCCCCTGTTTTGATGAACCTGCCTTCAAAGCCAACTTTTCCGTGCGGATTCGCAGAGAAGCAAAGCATATTGCCCTCTCAAACATGCCTAAGCTGAGAACAGTAGAGCTGCCAGACAGCCTGTTTGAGGACCAGTTTGATATGAGTGTTAAGATGAGCACATACCTGGTGGCCTTCATTGTTTCTGACTTTCTGTCTATCAGCAAAACGAGTCAGCATGGAGTCCAGATTTCAGTGTATGCTGTGCCAGAGAAGATCGACCAGGCAGAGTTTGCTCTAGATGCTGCAGTGAAGCTGCTTGACTTCTATGATGACTACTTTGACATTCCCTACCCTCTACCAAAACAGGATCTTGCTGCCATACCAGACTTCCAGTCTGGAGCGATGGAGAATTGGGGTTTGACCACCTACCGGGAATCAGGCCTTCTTTTTGACCCTCACAAATCTTCTGCTTCAGACAAGTTGGGCATTACAATGATCATCGCCCATGAACTGGCCCATCAGTGGTTTGGAAACTTGGTGACCATGCAGTGGTGGAATGATCTGTGGCTGAATGAAGGTTTTGCCAAGTTCATGGAGTTTGTGTCTGTCAACATCACCAATCCTGAACTGCAAGTTGAGGATTATTTCTTAGACAAGTGTTTTGAAGCCATGGAGGTGGACTCCTTGAGCTCCTCTCACCCAGTGTCCACACCGGTGGAGAACCCTGCTCAGATACAGGAAATGTTTGATGACGTTTCCTATGATAAGGGAGCTTGTATTCTGAACATGCTGAGAGAGTTTCTGACTCCAGATGCGTTTAAATTGGGTATTGTGAAATACCTAAAACGCTACAGTTACCAGAATACAGTCAATAGTAACCTGTGGGAAAGTCTGACCAATGTGTGTGACTCTGATGGTCTGGATGAAGGGAGACTGAAGGGTGATGAGTCCTGTCGGCGCTCAGTCTCACACTCTGGAGCTTCTaAATGGCACTCTGAGGATGAGCTGGACGTTAAGGCTATGATGGAGACATGGACGTTGCAGGAGGGCTTTCCACTCATTACGGTGGAGGTCAAAGGTCGCGAAGTTAGACTAAGTCAAGAGCGTTACCTCAAGAGTGATGACCCCTCACAAACATCcagCTTCCTGTGGCACGTTCCGTTGACTTACATTACCAGCGACTCGACCACAATTCACCGCTTCCTGCTTAAGGCCAAAACagATGTTTTGTATCTGCCGGAGGAGGTGGACTGGATCAAGTTTAACGTGGACATGAGTGGATATTACATTGTTCACTATGAGGGTTCCGGCTGGGATGACCTCATCGCGCTGCTCAAACACAATCACACAGCGCTCAGCAGCAATGACCGGGCCAGCCTCATCAACAACGCCTTCCAGCTGGTCAGTGTTGGTAAGCTTCCCCTGGATAAGGCTTTAGACCTGACACTGTACCTGAGCAAGGAAACTGAGATCATGCCAGTGACGCAGGGTTTCAGTGAGCTTGTGCCTCTGTACAAACTGATGGAGAAGAGAGACATGCTGGAGCTGGAGAACCAGATGAAGGGCTACATACTGCAGCTGTTCAGGAAGCTCATAGACCAGCAGTTGTGGACTGATGATGGCTCTGTGTCTCAGAGGATGCTGCGCAGCTACCTGCTCCTGTTCGGCTGTGTGCGGGGTCATCCTCCCTGTGTCAGCACCGCTACCCAGCTCTTCAACCAGTGGAGGGACACCGATGGGAAtatgagCCTTCCGAATGACGTTACTATGGCTGTGTTTTCTGTTGGCGCCCGGACTGAAGATGGCTGGGAATTCCTATTTGAGAAGTACAAGGAGTCCATGTATGTCTCGATGAAGAGCAGGATAAAGATGGCCCTCACGACCAGCCCTCTCGATCACAAGCTTAAATGGATGATGGAGCAGAGTCTGGTGGGAGAGGTGATGAAGACTCAGGATCTGCCATATATTGTGTCTTCCGTCAGTAAAAATCCTAAGGCCTACAAACACGCATGGGACTTTTTAAAAGCTAACTGGGACTCCCTGATTAAGAAGTTTGAGCTTGGCTCATACTCTATAGCGCACATGGTAGTGGGAGTGACCAACCAATATTCCACCAGAGAAATGCTAGCTGAGATTCGTAGTTTCTTCACTTCCTTGCGGGCTGAGACCGGAGCTGAACTGAGATGTATTCAGCAAGCCTTGGAGAACATTGAGGAGAACATTCGCTGGATGGACAAGAACCTCCCACTACTGAAGGCCTGGCTGCACAGACACTATGACCAGCAAAAGAAAATAGAGCTGTGAAGCACATACTGTAAATGTCAAAGTCATAGgtgtatacattttatagtgCAGCTTAAtagaatgcaaatgttttgataAGAACTTCGGTAAAGTGTGTGAAATAAGTGATACTGAATTTGTGAATATGGGGTGAATATTTTTGAAGAGCTGTACCATTGCTTGTAAAGGTAAAATGTAAGAATGTCATCTGTTTAAGAacatttcatcttaaaaaaattttttttgtgaactgga

Function

symbol description
erap1b Predicted to enable metalloaminopeptidase activity; peptide binding activity; and zinc ion binding activity. Predicted to be involved in several processes, including peptide catabolic process; proteolysis; and regulation of blood pressure. Predicted to act upstream of or within antigen processing and presentation of endogenous peptide antigen via MHC class I. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in cytoplasm and plasma membrane. Human ortholog(s) of this gene implicated in cervix carcinoma. Orthologous to human ERAP1 (endoplasmic reticulum aminopeptidase 1).

NR:

description
endoplasmic reticulum aminopeptidase 1-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008237 metallopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K09604 ARTS1; adipocyte-derived leucine aminopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238610.1 True 3221 mRNA 0.46 19 10034953 10042310

Neighbor

gene id symbol gene type direction distance location
arvcfb arvcfb,LOC107595013,LOC107744414,LOC107673389,LOC107672748 coding upstream 6916 9863630 ~ 10028037 (+)
rnf181 rnf181,LOC107595010,LOC107750183,LOC107672715,LOC107592411 coding upstream 203016 9829117 ~ 9831937 (+)
ccdc117 LOC107673415,LOC107709873,LOC107595009,LOC107750174,LOC107672783,LOC107592335 coding upstream 218084 9813196 ~ 9816869 (+)
zgc:64051 NA coding upstream 255065 9776630 ~ 9779888 (+)
lman2lb LOC107709866,LOC107673435,LOC107595003,LOC107672798,LOC107592340 coding upstream 262468 9768255 ~ 9772485 (+)
rad17 rad17,LOC107672793,LOC107673420,LOC107595018,LOC107592326,LOC107752497 coding downstream 18104 10060414 ~ 10065563 (+)
ccdc125 LOC107673377,LOC107595019,LOC107672719,LOC107592408,LOC107752495 coding downstream 23754 10066064 ~ 10069834 (+)
fam151b fam151b,LOC107744481,LOC107673370,LOC107672699 coding downstream 28140 10070450 ~ 10073962 (+)
LOC122344631 NA coding downstream 47266 10089576 ~ 10089947 (+)
LOC122346129 ela3l,LOC107592405,LOC107672799 coding downstream 54624 10096934 ~ 10100280 (+)
G34911 NA non-coding upstream 998 10032439 ~ 10033955 (+)
G34905 NA non-coding upstream 6132 10008047 ~ 10028821 (+)
G34861 LOC107709872,LOC107595007,LOC107673413 non-coding upstream 224103 9808449 ~ 9810850 (+)
G34842 NA non-coding upstream 267132 9767294 ~ 9767821 (+)
G34841 NA non-coding upstream 268604 9765970 ~ 9766349 (+)
G34941 NA non-coding downstream 60575 10102885 ~ 10106441 (+)
G34957 abhd17b,LOC102776450,LOC107592319,LOC107672759 non-coding downstream 219302 10261612 ~ 10264441 (+)
G34956 LOC107672769,LOC107592318,LOC107599914,LOC107738291,LOC107673406 non-coding downstream 243457 10285767 ~ 10287373 (+)
G34959 NA non-coding downstream 246114 10288424 ~ 10291861 (+)
G35040 NA non-coding downstream 283556 10325866 ~ 10326714 (+)
si:ch211-102c2.4 NA other upstream 235595 9796381 ~ 9799358 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other upstream 1163435 8864202 ~ 8871518 (+)
snx19a snx19a,LOC107597619,LOC107681657 other upstream 1729507 8289720 ~ 8305446 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other upstream 2024354 8001578 ~ 8010599 (+)
p2rx1 p2rx1,LOC107598068,LOC107712377,LOC107664512,LOC107587372 other upstream 2236985 7754074 ~ 7797968 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other downstream 21907 10064217 ~ 10139733 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other downstream 675221 10717531 ~ 10736059 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other downstream 884513 10926823 ~ 10933753 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other downstream 1004169 11046479 ~ 11064446 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other downstream 1093913 11136223 ~ 11150225 (+)

Expression


Co-expression Network