iqcd (LOC107733227,LOC107672405,LOC107597236)


Basic Information

Item Value
gene id iqcd
gene name LOC107733227,LOC107672405,LOC107597236
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11362066 ~ 11364940 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238870.1
GTTTTATGAAGTACAGACAGtgaaaatatatctatatacacatataagTAAATCacgagattttttttatttgtagtaggAAATAGGAAGTCACTGGGATCAGAATGTCATGCCACCGGTTGTCACAGCAACTGGTATACATAACATCAGAGTTTGTGTTTACACGCATACAGATTTCTACAAACAAGAATAATAAGACGAAACCTCTAATGATGGGCTCAAAAACAGACACTGTCCCTCTTGAAGACATACTATCAGATTCAGCCACCCTTGCAAACAAAACTAAAGCAGACTACTTAAAGACCATAAACCCTTCCAAGAAGACACTCTCATCTCTGGAAGCAAAGCTTATATTTGGGGTAATAGATGAGTGCATTCATCAGATGGAGATTGTCTCTCTTCTGCCCACTATGCTGAGCTCTCCAGAAGCACTTTCCCAGAGTCTCGGAGAAGAGGTGGTCTATGCCCTGAAAGAGCAGCAGAGGCTTGGGGAAATGTACCAAGCTATGGTGCTTGATGCAAGCTTGAAGCaaagtgaagaacaattaaCCAAATTGGCGAAAGCAATTGAGGATTCCTTTCGCAACATTATGCGGCTATTAAGGGCAACTCCGTCCACAAGGGAGGTGCTAAAAGGCATAAAATCAAACCCAGGGCAAGAGATGGAGTCTCTGGCACTGAAAGTTGGCCTGTGTGAGTTGAGAGAGATTGTTTTGGAGAGGCTTCTCACTACACCTGCAGAGGAGAGAGAACGCAGAGAGATGATGCTTGAAGTCAGTCTACGTCACTCTTCTAACCAGGAGCTGATAGACTCGCTGGAAAAACAGGTTGCCAGTGCAATAAAAGACAAGGATACAGAGATCTCCACGCTGAATAACAAAGCACACCAGCTGAGAAGCTCGCTACATCAGATGGAAAAAGGTTTGGAGGACTTCATCGTCCGAATTCAACAGGATGCTGAAAAACAGAGCCAGTCAGACACAAAAACTTCAGAGGGGAAGAGAGCTCGTTTGCAGCAAGAGGCCAGTCAACTGAGAGCTCAGCTCAATAATGTGACTGCTGAGGACAGAGAGAGTGAACTGGCGCTGCgaaagAAAAAATACAAGGAGGAAACAGAGATTGAGAACTGGATCCAGAAATATGATACTGAAATTGGAGAGAAACAGACAGAATTGGAGGAAATGACACGCATGTATGAAGCAGACATGGCAGAGctgagagagctggaggaaCATTCTGCAATTCTGGACCTGGAGTACTCCCAGATTATGAAGGAGCGACGGGAGGCTCAGAAGCAGAGGGAACaacaggaaagagaaagagagatacaGAGCCAAGCTGCCGCTGTCATTCAGGCCCACTGGAGAGGCTTTTGTGTACGCAAGGCCATCAAGGCCAATGCAAAGCCCAAGAAAGCGAAGAAAGGAAAGGGGAAGAAAggcaaataaaagaaagcaagacATAGTGCAAGATTAACAACATTATTTAGATTATTGGATAAATAAAATGGGGAAAAACACTGTGAGCGTTCACATTCCTCTGATTTTTCAGTCTAAGGGAGTCGATGTTAGCtgctaaaaatgaacaaagctgAAAATTTTAGCCAGTCAGAGCTGACAGATTTCACAAAACATTGAATATCGTATAACTGGCACAGATCCCATTCAGTAGGAggaaatatcacacattttatattgtgaGCCGatcttttgtctttatttgcaAACGTAATGTCTTGcgtttttaaatcagatttagaAAGTTGTGTAGTGTATTTCAGCTTATA

Function

NR:

description
IQ domain-containing protein D isoform X2

GO: NA

KEGG:

id description
K24839 IQCD, DRC10; IQ domain-containing protein D

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238870.1 True 1786 mRNA 0.43 5 11362066 11364940

Neighbor

gene id symbol gene type direction distance location
plp1b LOC107597234,LOC107680389,LOC107672433,LOC107592271 coding upstream 31760 11324743 ~ 11330306 (+)
nlgn3b nlgn3b,LOC107672382,LOC107680388,LOC107733224,LOC107597232,LOC103045798 coding upstream 39203 11304365 ~ 11322863 (+)
cchcr1 LOC107680404,LOC107732622,LOC107747821,LOC107687693,LOC107592355 coding upstream 102586 11250625 ~ 11259480 (+)
stag2a stag2a,LOC107680370,LOC107732619,LOC107597229,LOC107687653,LOC107592356 coding upstream 112902 11233407 ~ 11249164 (+)
acsl4b acsl4b,LOC107747809,LOC107687654,LOC107597230,LOC107732603,LOC107680372,LOC107592357 coding upstream 129072 11223954 ~ 11232994 (+)
uprt uprt,LOC107733222,LOC107672530,LOC107680369,LOC107748634 coding downstream 35509 11400449 ~ 11403283 (+)
si:dkey-237j10.2 LOC107672540,LOC107756556,LOC107597242,LOC107748630,LOC107680403 coding downstream 102780 11467720 ~ 11471124 (+)
si:ch211-26b3.4 si:ch211-26b3.4,LOC107597246,LOC107756552,LOC107565423,LOC107741180,LOC107680385,LOC107672834 coding downstream 108172 11473112 ~ 11512262 (+)
apool apool,LOC107672608,LOC107756555 coding downstream 149469 11514409 ~ 11518903 (+)
zgc:113208 zgc:113208,LOC107672636,LOC107597249,LOC106567768 coding downstream 239887 11604827 ~ 11609386 (+)
G35274 kat5,LOC106563454,LOC107597226 non-coding upstream 152661 11204500 ~ 11209405 (+)
G35267 NA non-coding upstream 174372 11187254 ~ 11187694 (+)
G35229 NA non-coding upstream 342874 10945056 ~ 11019192 (+)
G35202 NA non-coding upstream 523699 10838012 ~ 10838367 (+)
G35197 NA non-coding upstream 545765 10813457 ~ 10816301 (+)
G35304 prps1a,LOC103031347,LOC107733231,LOC107597240,LOC107672505 non-coding downstream 17730 11382670 ~ 11387170 (+)
G35309 NA non-coding downstream 40588 11405528 ~ 11405761 (+)
G35311 NA non-coding downstream 49101 11414041 ~ 11414688 (+)
G35322 NA non-coding downstream 76599 11441539 ~ 11442411 (+)
G35316 NA non-coding downstream 98929 11463869 ~ 11465339 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other upstream 58635 11266642 ~ 11303431 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other upstream 211841 11136223 ~ 11150225 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other upstream 297620 11046479 ~ 11064446 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other upstream 428313 10926823 ~ 10933753 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other upstream 626007 10717531 ~ 10736059 (+)
glra4b glra4b,LOC107741187,LOC107565418,LOC107680382,LOC108442052,LOC108259905 other downstream 273576 11638516 ~ 11652683 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other downstream 559288 11924228 ~ 11943110 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other downstream 884198 12249138 ~ 12255672 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other downstream 1149073 12514013 ~ 12528790 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other downstream 1338412 12703352 ~ 12705245 (+)

Expression


Co-expression Network