mcc (mcc,LOC106565572)


Basic Information

Item Value
gene id mcc
gene name mcc,LOC106565572
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30978593 ~ 31052589 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238956.1
ATGGCACTGATGGACGGAGAAAAAAGTAAACCAGTGAAGACGAGCAGGCAGTGTCGCGTGAAGCGCCGTGAAGCGGTGAGTTCGGCGGGGGTTCATGAtggcggcggcggcggaggGAGCGGCAGCAGCGGCAGCAGCGACTCGTGCAGCACCGCGGAGGAGGAGCGCGTCCGGCGGCTCTTCCAGACCTGCGACGGGGACGGGGACGGATACATTAACCGGAACGACCTGCTGATGGTCTGCCGGCAGCTGAACATGGAGGACTCGGTGGCGGAGATCATGGGGCAGCTGGGCGCAGACGAGCGAGGGAGGATCTCCTTCGAGGACTTCACGCGCTGCCGCATGCAGCTGCTCAACGAGATCCGCAAAGAGGAAGGACAGCTCTCGCTGCTCTCCAGCGACTCGGGGAGGAGGAACGCTCACGGGTGTGTGGCCTCGTGGCCCACCAGCAGCGACAACAGCCTCGGCGCCCGAGAGAGCTGGGAGTTTGATTCTGGAGCTCGAGACTTACAGAGTCCAGAGTCTCTCACGCAAAGCCATGCTCCGCCGCTCCAGAACATCCTGGATCCTCCGGCCGGGAATCCCTCCGGCTACCTGGAGCTGGCCAACACTctgcaTCTGGCTGCGCTGGCGTCTCTGAAGGGTGACGTGGTGGAGCTCAACCAGCGACTGCTgcagaccgagagagagagagacacgctGGAGAAGAGACTGGCCAAAGCACAgtgtgagCAGTCTCATCTGCTGCGGGAGCACGAGGAGGTTCAGGAGAGGACGACTCTGCGTTACGAAGAGCGGATCACAGAACTGCACAGCATCATCGCTGAACTCAACAAGAAGATAGACCTGCTGCAGGGAGCCACCATCagggAGGAGGATGAGTTTTCCGAGCTTCGCTCCGATCTCAGTCACAGCCAGCTGGAAGTTAACGAGGATGACCGGAGCATCGATCAGGACCCCGACCAGGCGTCCATCTCGCTGCCTGAGAACCAGTCCACGCTGGTCACTGCAGACATGGATAACTGCAGTGACCTGAACTCGGAGCTGCAGCGGGTTTTGACCGGGCTGGAGAGCGTCCTCTGCGGCCGCAAGAAGAGCACGTGCAGCCTGTCCGTGGCCGAGGTGGACCGACACATCGAGCAGCTGACCACCGCCAGCGAACACTGCGACCTGGCCATCAAGGTCAAACACCCGACAGACGCAGTACACACCTTCATGTGGATCGCGCTCTGGGCTGATCTGGATTGGTTCTACCCCAGTCTGTGTGAGGAGCGTGTGCGCTGGGAGAAGGAGCTGGCCGGCCTGCGGGAGGAGAACGAGAGTCTAACGGCCATGCTGTGCAGCAAAGAAGAGGACCTCAACCGCACCAAAGCCACCATGAACGGCATCCGAGAGGAGCGAGACCGTCTGCGCAGACGCgtacGAGAGCTGCAGACACGCCTCCAGAGCGTTCAGCCTGGCGCTCCGTCCAGTCCTGGGCGTCTGACTCCGGCGGGGCGTCCCATCAACCCCAGCACCGGAGAACTcagcaccagcagcagcagcaacgaCATCCCCGTCGCCAAAgtgGCGGAGCGAGTGAAGCTGTCGAAAACACGCTCCGAATCGCTGCCAGCAGAGAGATCGGTCCTCGGATCTGAAATCAGCAGCATCGGGgTGTCCAGTAACGTGGCTGAACATCTGGCTCATTCCCTTCAGGACTGCTCCAACATCCAGGAGATCTTCCAGACGCTCTACTCACACGGATCCGCCATCTCCGAGAGCAAGATCCGTGAGTtcgaggtggagacggagagacTCAACAGtcGCATCGAGCACCTGAAGTCTCAGAACGATCTGCTGACCATCACACTGGAGGAGTGTAAGAGCAACGCCGAGCGTATGAGCATGCTGGTGGGGAAATATGAGTCCAACGCCACCGCACTCAGACTGGCCCTGCAgtacagtgaGCAGTGTATTGAGGCGTATGAGCTGCTGCTGGCGCTGGCTGAGAGTGAACAGGGTCTGGTTTTGGGTCAGTTCAGAGCCGCTGGAGTCAGTGCAGTggGAGAGCAGGCGGGTGAGGAGAGCATCTCTCAGATCCTGAAGAAAGCTCACGACAGCAGGAAGACGGCGGAGATCGCCGCTAAAGATCTCCTGACTCGTCTGGACGGCAGCTGCGGAGCGGCGTTTGCGGTCAGCGTCCAGCCCTGGGAGAGCCTCTCGTCCAACAGCCACACCAGCACCACCAGCTCGACGGCCAGCAGCTGTGACACGGACTTCTCTAAAGACGACGAGCAGCGTCTGAAGGACTACGTGCAGCAGCTGAAGAACGACCGGGCGGCCGTCAAACTGACCATGCTGGAGCTGGAGAGCGTCCACATCGACCCGCTGAGCTACGACGTCAAACCCCGAGGAGACTCGCAGAGACTGGACCTGGAGAACGCCGTGCTCATGCAGGAGCTCATGGCCATGAAGgaggAGATGGCGGAGCTGAAGGCTCAGCTGTATTTgctggagaaggagaagaaagcTCTGGAGCTGAAGCTGAGCACGAGGGAGGCTCAGGAGCAGGCGTATCTGGTGCACATCGAGCATCTGAAGTCTGAGGTGGAGGAGCATCAGGAGCAGAGACGCCGGTCACTCACCTCCACCTGCAGCAGTGCTGGAGCCAAAGACAAGAGCGTCAAGgaCTCTGATTCCCCGGCGATCAGTCTCTCTGACCTGAGGAGTCTGAACGACAGCGACCTCGCGGCGGAGCTCACCAGCGCCCTCAGGAGAGAGAAGAAGCTGAAGGGTCGTGTTCAGGAGCTGGTGGCAGCGTTAGAAAGGCTGACTAAAAGCAGTGAGGTCAGACATCAGCAGTCGGCGGAGTTCGTGAACGACCTGAAACGAGCAAACAGTAATCTGGTGGCGGCGTACGAGAAAGCCAAGAAGAAGCACCAGAACAAGCTGAAGAAGCTGGAGTCTCAGATGATGGCGATGGTGGAGCGTCACGAGACGCAGGTGAGGATGCTGAAGCAGCGCAACGCTCTCCTGGAGGAGGAGACGTCTCGACCGCACGCCAACGAAACCTCGCTCTGAGCCTCGGCCGGGACAGGCGTCTTTTATACCGCTACGTTTTTCCAATTTCTAAGTATGGGGTTCACCGTTTCTACGCTCTTACCGGTCAGGCAGCGGCACAGACTTAAAGAGACGAACTGTTATATTTCATAATCGTACAGCGTAGAGAAATAGAGTTCTGAGCAATAAATGAGAAGGAGGTTTCCTTCGTCTGCTGGTTAAACTCACATCCTCCGTTGAACCGCCTCACAGGACTAGTTAAGACTCCGACCAGCATCCTGTCATCAGGCTCCAAACATCATCCAGAGTCAGACAGATGACCGACGAATCAGGGCCGATTATTCTGAACTAAGAACAATAGATTTATTCATCTATGCTcacattagttaataaaaatacgaCTTTGGTTTTATAATATTGCTGAATCTTTATTTTAACTGAGATTTCTAAATCCCGTATGAAAAAAGTTATAGTAAATACTGGAGAACCATATTTTAGTGAAGTGTTTTAGGACTAAAAAACCTGAATTAATTTGTTTGCAGTAATTCTATAATTGCTGTGGTATTATAACAACTGtagtaatataaacaaatgactCATTAACTAATTACCCAGTACTGTACTAGTACTGTTATACTGCAGCACTAAAAGATACTCCAGGATTTATTCATCATTTGACTGGAGATAATActacagtgttgtaaatactctcatatatatctatatctagaGCATGGTTCAGACACACTagtatttactgtcatttattaCATGGCTTTCTCTTGTGGGAAGTAACAAATGAAACGTTAATTGTAAAGCGTTACCCATTTATCATCGAAATCTGGGCCGTTTTTATTAAGTTGAGGTGTTTTGAATGAACCGTTGAGTTAATCGCAGTTAAGACTTGAAGAAAAGATTTCTTTCCTTAGAATAACATGCTCTGATCTGAAACTTAATGTAGCGTC

Function

symbol description
mcc Predicted to enable calcium ion binding activity. Acts upstream of or within convergent extension involved in gastrulation. Is expressed in several structures, including blastomere; digestive system; germ ring; swim bladder; and trunk. Human ortholog(s) of this gene implicated in colorectal cancer. Orthologous to human MCC (MCC regulator of WNT signaling pathway).

NR:

description
PREDICTED: colorectal mutant cancer protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238956.1 True 4007 mRNA 0.55 21 30978593 31052589

Neighbor

gene id symbol gene type direction distance location
cux2a NA coding downstream 27105 30942514 ~ 30951488 (-)
LOC122344688 LOC107743064,LOC107698017,LOC107734413 coding downstream 36711 30920817 ~ 30941882 (-)
rabepk rabepk,LOC107743065,LOC107579283 coding downstream 142859 30831189 ~ 30835734 (-)
LOC122344907 NA coding downstream 208686 30765631 ~ 30769907 (-)
golga2 golga2,LOC107658391 coding downstream 223653 30734104 ~ 30754940 (-)
rcl1 rcl1,LOC107701854,LOC107655287 coding upstream 1335 31053924 ~ 31064355 (-)
LOC122344691 NA coding upstream 21454 31074043 ~ 31081265 (-)
rplp0 rplp0,LOC107654305 coding upstream 56134 31108723 ~ 31112733 (-)
gusb gusb,LOC107719352,LOC107701859,LOC107654306,LOC107734369,LOC104964597,LOC107591494 coding upstream 89988 31142577 ~ 31155113 (-)
ca4a LOC107663683,LOC107654307,LOC107734368,LOC107719346 coding upstream 138574 31191163 ~ 31196967 (-)
G40782 NA non-coding downstream 271 30977609 ~ 30978322 (-)
LOC122344702 NA non-coding downstream 3710 30974318 ~ 30974883 (-)
LOC122344701 NA non-coding downstream 15086 30959444 ~ 30963507 (-)
G40760 LOC108429729,LOC107563441 non-coding downstream 53396 30920851 ~ 30925197 (-)
LOC122344700 LOC108429729,LOC107563441 non-coding downstream 53396 30921178 ~ 30925197 (-)
G40798 NA non-coding upstream 35603 31088192 ~ 31094923 (-)
LOC122344940 NA non-coding upstream 168228 31220817 ~ 31222257 (-)
G40841 NA non-coding upstream 220097 31272686 ~ 31273001 (-)
G40842 NA non-coding upstream 227588 31280177 ~ 31280431 (-)
G40995 NA non-coding upstream 370496 31423085 ~ 31506097 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 152235 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 185874 30789633 ~ 30792719 (-)
G40711 NA other downstream 245233 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 365452 30590843 ~ 30613141 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 885017 30087966 ~ 30093576 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 278760 31331349 ~ 31350449 (-)
apooa apoo other upstream 649864 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 668681 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 1061307 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 1161442 32214031 ~ 32293782 (-)

Expression


Co-expression Network