si:ch211-284e13.6 (LOC107746420,LOC107663368,LOC107599222,LOC107734114,LOC107596187)


Basic Information

Item Value
gene id si:ch211-284e13.6
gene name LOC107746420,LOC107663368,LOC107599222,LOC107734114,LOC107596187
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14094578 ~ 14099813 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239094.1
CAGAATCCGAATAGCGGCTCCTAGAGCCAAACCACATTTTACACATTAAGGAACTGTTTCTGGTAAAGTGTCGCTGATACTAAGACAGGATAAATAATATCGTGCCCTCCTGGTCACTGTTTTCAAACTGAAGAAGTTTAAATGATACTCCAAGAAAGCAAACCAGAGAGATATCATTtccttttcctattttaaatagtgtttATATGAGAACGCTCTTTCTTCTTTGAAATAAGACACAATTCCGATTAAATCGACGGAGAACTCACTTGACATGCACTTCACGGACCTCCACGGACTACTACGGTAACATAAGCCTGGCCTGTGGAGAGCAAACCCACCCAGCGATCCACCCACCCACACAGTGTGAAATCCACACCCCCTCAAGGAGAGCGGTGAGGTCACAGAAGACAAAAGCACCATTGTGCCATCAGAGGGATGGAGGACAGGAGGCACCTGCCACCAGATGGAGGTGGCAAAGCCAAACGCTCCACCTCAGCTGAGTGCAACACAGAGGACAGAGGAGTCAGGAAGGAGCATGGAGACCCTGAGACCTCCGCTCAAATGCGTGTAAGAAAAGACGATCTCTGCGATGTTCCTCGCAAGGTTCCTCGCTTCCAGTATGTGGATTTCCCTTCCCTGCACCAGTGCATCCAACAACTTTCTGTGCCTCCACTGAACGGCTGGCTCGGATCTTGCTCGCTGGCAAAGACACCAAACTACAGGCCCGCTAGTCCGAAGGAAAAGGTGCCCAAGTTTAAATACGTGGACTACCCATCTCTCCACCACTGCATTCAGCAGCTGTCTGTGCCTCCATTAGAAAGCTGGAGTGCAGGGCTGGTCAGGTTTAATGCAGAGGGGAAACAGGATGGCTCTGGGTCGCAGAAGAGACCCTCTCAACCTGGCACTGTGAAGAATAACATAAGCAATGAGGCAGGAGATCAAAACAACGAGGACAGGAGTAGAGTTATATCATTTTCTTTCCCAAGAGACACACGCAACTCTGTCTCAGGCAAGGAGGAGAGGCCTCAACACGACTACACCTCAGAGGTCCCACAAAGGTCAGAGAAAGGTAACACACCTCTAAGGTCCCGTGCTGCTAAACCAGATGCTGCTTTGCAATCGGATTTCAGATCAAGAGCAGAATCTGGTTCTGGATCTCGTAGTGACGCAGCAGTGGTGAGAAACGCCAGACCCTCGGTTATTAACATGGTGCACACGGATAGGCAGAAGCACTGGACAACGGCAGATCACCTGGAAGAACAATTGAACTCTCCAGATTCAGTCGGACGGGTAACATGGAAAACCATCCCGGAGTCAGTCTGCCCATTCTGCCAACAGATGTTCACCAACCCCGAGCAGTTCAGGGCTCATCAGCGGAGCCATAGAGATAAGAGACCAAACTGATGTACAGACATACTGAGTGAGAACTGCTTTTGGCAAACGGTTAATGCCACATCATATGGAATCGTATCATCAGAGGCCTTCTTGTGTTGTGACTGGCTATAATGGCATTGCTGGCAGGACTATAGGGAGATCGAAGACACATTAAGCACATTAGACAGTTTGGGTTCAGACCTTAGGGAGAATGCAAGACTTGTCTTGACTGATGTTGTGAAGCCTAAAAGGGCAGAACtggacagacagaaacacacaagcaTACAATATTCATGCACGTACAGTGCACTTGTGAGAGTTCCAACACGCACAGAGCATCCAATTCATGATTCAGGAGAGGTCAATATTTACTGCCCCACATAAGGACCATCAGACATAATGGGGTTTCAGCTCAAGACAGGGGATTGGAACCAGATTTATAGTCTCTTCCATACATATATCAGCATGTTTACAGGGGTGGGTGAAGCTCAATGGACTGGTGCGTAAGaggatgactttttttttgttccccaCACTGTGTGCATGGTGGCAGgctaaatatttagctttgGGTGCCTACAAAATAATGGCTATTGTTAATGctgcacaaacaaacaggcTTGATAATAATGATTTGTTACATTAGCTTTTTATcgttttgtactttttatgtttttggaaaTTAATGTCTAGTGGCTTTGAGCTAGTAgctttaaatcttaaaaaatgtacCGCTTGTTTTCAAGTGTTTAATTGTGTGAGTAAAATTTTTTCATACAGAGA

Function

NR:

description
uncharacterized protein LOC110533723

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239094.1 True 2160 mRNA 0.46 4 14094578 14099813

Neighbor

gene id symbol gene type direction distance location
LOC122345200 NA coding downstream 536 14089145 ~ 14094042 (-)
si:ch211-284e13.4 si:ch211-284e13.4,LOC107599204,LOC107663370,LOC107746440,LOC107734146,LOC107661201,LOC107596113 coding downstream 8100 14064549 ~ 14086478 (-)
mpzl2b LOC107599229,LOC107746390,LOC107663371,LOC107596204,LOC107661261,LOC107734129 coding downstream 61992 14028417 ~ 14032586 (-)
scn4bb scn4bb,LOC107746389,LOC107599210,LOC107663372,LOC107661197,LOC107734128,LOC107596119 coding downstream 70026 14014414 ~ 14024552 (-)
fxyd2 NA coding downstream 92503 14000559 ~ 14002075 (-)
gucy2d gc3,LOC107599205,LOC107661246,LOC107734113 coding upstream 679 14100492 ~ 14112076 (-)
slc12a9 LOC107746400,LOC107599203,LOC107663403,LOC107661204,LOC107734138 coding upstream 30985 14130798 ~ 14140051 (-)
LOC122345196 LOC107663404,LOC107599202,LOC107746401,LOC107734151,LOC107661205 coding upstream 40429 14140242 ~ 14143791 (-)
mink1 mink1,LOC107746403,LOC107596107 coding upstream 56710 14156523 ~ 14190472 (-)
pld2 pld2,LOC107746406,LOC107663402,LOC107734122,LOC107661209,LOC107596108 coding upstream 91882 14191695 ~ 14212317 (-)
G36385 LOC107596209,LOC107734118,LOC107661259 non-coding downstream 117508 13975352 ~ 13977070 (-)
G36337 NA non-coding downstream 275244 13818248 ~ 13819334 (-)
G36297 NA non-coding downstream 381158 13712680 ~ 13713420 (-)
G36224 LOC107700249,LOC107746377,LOC107548465,LOC107710575,LOC105912484,LOC105027847,LOC106603104,LOC106563440 non-coding downstream 382619 13708100 ~ 13711959 (-)
G36279 NA non-coding downstream 457255 13633670 ~ 13637323 (-)
G36541 NA non-coding upstream 176283 14276096 ~ 14310067 (-)
G36561 NA non-coding upstream 210811 14310624 ~ 14310860 (-)
G36562 NA non-coding upstream 211149 14310962 ~ 14311328 (-)
G36537 NA non-coding upstream 211955 14311768 ~ 14320994 (-)
G36567 NA non-coding upstream 249295 14349108 ~ 14349936 (-)
rnf214 LOC107663407,LOC107746393,LOC107599207,LOC107596114,LOC107734124,LOC107661199,LOC107599223 other downstream 37873 14040982 ~ 14056705 (-)
tmprss13b LOC107746439,LOC107663381,LOC107599230 other downstream 85042 14001934 ~ 14009536 (-)
LOC122345901 NA other downstream 246508 13845403 ~ 13848070 (-)
G36336 NA other downstream 275636 13817742 ~ 13818942 (-)
G36298 NA other downstream 376035 13717124 ~ 13718543 (-)
znhit1 znhit1,LOC107752359,LOC107661214,LOC106567874 other upstream 179861 14279674 ~ 14282620 (-)
LOC122345141 LOC107752369,LOC107661250,LOC107567461 other upstream 192250 14292063 ~ 14302381 (-)
pdzd2 pdzd2,LOC107746802,LOC107681406,LOC107661237 other upstream 1106138 15205951 ~ 15264945 (-)
zfr zfr,LOC107746805,LOC107681158,LOC107552600,LOC107602019 other upstream 1194043 15293856 ~ 15308440 (-)
npr3 LOC107681138,LOC107746807,LOC107552598,LOC107602007,LOC107708637,LOC107661273 other upstream 1250203 15350016 ~ 15367413 (-)

Expression


Co-expression Network