c5h9orf85 (zgc:101016,LOC107599915,LOC107744485,LOC107673354,LOC103371459,LOC101078288)


Basic Information

Item Value
gene id c5h9orf85
gene name zgc:101016,LOC107599915,LOC107744485,LOC107673354,LOC103371459,LOC101078288
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10273023 ~ 10275197 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239192.1
GTTATTATACATTTGTTGAGCGAACGAGAATTAAATATTAGAGCTCACTACCTTTAACGTCAGGTGTGTTTTGTGAAGTTGGAAATCTTTCGTTTGGAGTTGAAAAGCATTAGCCAATTGCTATTTACTTCCGCTATTTTCGCATTGCGTCAATGTTCTCTTTAACGTGTGAAGCCACGCGGTTTCTCATTTAGGCGTTTTAAACGGTTACTACGTGTATATATTACGTATACTTTGGGGTAAAATGAGTTCTCAAAAAGGAAACGTTTCCCGGTCGCGAGGCCAAAAACACCAGAATGTAACCGCCTTCAAAAATGACAAGTACGGTGCAAGCGCACAAGTTAAGAAAGCCAAATCAAAGATTCACGATAGTCTGTGCCAGCGCTGCAAAGATGTGCTAGAGTGGAAAgtcaaatacaataaatacaagaCCCTTACACAGCCGCGAAAATGTGTAAAGTGTCTTCAGAAAACGGTGAGGGACGCCTATCATATCATATGCAAGCCATGTGCGCTAAAGCTGGAGCTTTGTGCAAAATGTGGGAATAAGGAAGAGATTGTCATCCCgctTGACaagaaggaagaagaagaggtaGAGGGCACCAGCCAGCCAAGTAAAGGAacgagacagaaaaaaagagaaaagaaggaGGAGGACGACAACGACGACAATGAAGATTTTGATGATATGGGCTTTAGCAATGATGACTGTGATAGTGATTCAGAAGTGGAaggaaattaacattttaaagtcttCTGTATGCATTACCAGCAAACAGCTAAACTTAAGAACAGTGTCTCCAAGGAAGACTGGGGTTGGATACTGGACATGTAATCACCTGTTCACCCGCTGTTAATTGGGAAAGACTCCCAggaggtgtttttttgtttccattACTGTGATCTTGCGGGAACCGGCACAGTCATTTGCGGAAACCcggtcttgttttttttaatcacacaaaCATTTCGATAGCAGTCATATTATTTATGAATGGCCATTTCACATTGGGAAGCTGTGTGAATTGAATGCGTTTCATaagcatttttgtaaattacaaaaaacagaaatagaaattaaacaattaataaatgacCTACAAGCAAATGCTGTGCTGTctgtttagaaaaaaactgaat

Function

symbol description
zgc:101016 Orthologous to human C9orf85 (chromosome 9 open reading frame 85).

NR:

description
PREDICTED: uncharacterized protein C9orf85 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239192.1 True 1140 mRNA 0.40 4 10273023 10275197

Neighbor

gene id symbol gene type direction distance location
LOC122346129 ela3l,LOC107592405,LOC107672799 coding upstream 172743 10096934 ~ 10100280 (+)
LOC122344631 NA coding upstream 183076 10089576 ~ 10089947 (+)
fam151b fam151b,LOC107744481,LOC107673370,LOC107672699 coding upstream 199061 10070450 ~ 10073962 (+)
ccdc125 LOC107673377,LOC107595019,LOC107672719,LOC107592408,LOC107752495 coding upstream 203189 10066064 ~ 10069834 (+)
rad17 rad17,LOC107672793,LOC107673420,LOC107595018,LOC107592326,LOC107752497 coding upstream 207460 10060414 ~ 10065563 (+)
gda gda,LOC107673426,LOC107672768 coding downstream 1670 10276867 ~ 10282029 (+)
tmc1 tmc1,LOC107672717,LOC107738298,LOC107592401,LOC107599958,LOC107744426 coding downstream 21935 10297132 ~ 10306693 (+)
tmc2b tmc2b,LOC107744486,LOC108255389,LOC108434469,LOC103356627 coding downstream 34412 10309609 ~ 10318604 (+)
LOC122346143 cyp1d1,LOC107599971,LOC107673361 coding downstream 44463 10319660 ~ 10324635 (+)
anxa1a LOC107744429,LOC107599917,LOC107673431,LOC107738289,LOC107592317,LOC107672753 coding downstream 62026 10337223 ~ 10341120 (+)
G34957 abhd17b,LOC102776450,LOC107592319,LOC107672759 non-coding upstream 8582 10261612 ~ 10264441 (+)
G34941 NA non-coding upstream 166582 10102885 ~ 10106441 (+)
G34911 NA non-coding upstream 239068 10032439 ~ 10033955 (+)
G34905 NA non-coding upstream 244202 10008047 ~ 10028821 (+)
G34861 LOC107709872,LOC107595007,LOC107673413 non-coding upstream 462173 9808449 ~ 9810850 (+)
G34956 LOC107672769,LOC107592318,LOC107599914,LOC107738291,LOC107673406 non-coding downstream 10570 10285767 ~ 10287373 (+)
G34959 NA non-coding downstream 13227 10288424 ~ 10291861 (+)
G35040 NA non-coding downstream 50669 10325866 ~ 10326714 (+)
G35041 NA non-coding downstream 51834 10327031 ~ 10327461 (+)
G35042 NA non-coding downstream 54692 10329889 ~ 10330322 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other upstream 133290 10064217 ~ 10139733 (+)
si:ch211-102c2.4 NA other upstream 473665 9796381 ~ 9799358 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other upstream 1401505 8864202 ~ 8871518 (+)
snx19a snx19a,LOC107597619,LOC107681657 other upstream 1967577 8289720 ~ 8305446 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other upstream 2262424 8001578 ~ 8010599 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other downstream 442334 10717531 ~ 10736059 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other downstream 651626 10926823 ~ 10933753 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other downstream 771282 11046479 ~ 11064446 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other downstream 861026 11136223 ~ 11150225 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other downstream 991445 11266642 ~ 11303431 (+)

Expression


Co-expression Network